FFCP PHASE1:Mm9::chr17:35972946..35972978,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=971 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:35972946..35972978,- | |||
|description=CAGE_peak_at_chr17:35972946..35972978,- | |description=CAGE_peak_at_chr17:35972946..35972978,- | ||
|id=chr17:35972946..35972978,- | |id=chr17:35972946..35972978,- | ||
|ontology_enrichment_celltype=CL:0002319!7.69e-13!43;CL:0000540!2.19e-12!33;CL:0000047!2.19e-12!33;CL:0000031!2.19e-12!33;CL:0000404!2.19e-12!33;CL:0000393!2.65e-12!39;CL:0000211!2.65e-12!39;CL:0000055!4.90e-12!50;CL:0000221!6.27e-12!44;CL:0000133!6.27e-12!44;CL:0000117!1.30e-11!23;CL:0000337!1.30e-11!23;CL:0000034!1.55e-10!97;CL:0000723!3.19e-09!91;CL:0000048!3.19e-09!91;CL:0000144!9.67e-08!121;CL:0000012!9.67e-08!121;CL:0002371!2.57e-07!118;CL:0000548!3.04e-07!115;CL:0000004!3.04e-07!115;CL:0000255!3.04e-07!115 | |ontology_enrichment_celltype=CL:0002319!7.69e-13!43;CL:0000540!2.19e-12!33;CL:0000047!2.19e-12!33;CL:0000031!2.19e-12!33;CL:0000404!2.19e-12!33;CL:0000393!2.65e-12!39;CL:0000211!2.65e-12!39;CL:0000055!4.90e-12!50;CL:0000221!6.27e-12!44;CL:0000133!6.27e-12!44;CL:0000117!1.30e-11!23;CL:0000337!1.30e-11!23;CL:0000034!1.55e-10!97;CL:0000723!3.19e-09!91;CL:0000048!3.19e-09!91;CL:0000144!9.67e-08!121;CL:0000012!9.67e-08!121;CL:0002371!2.57e-07!118;CL:0000548!3.04e-07!115;CL:0000004!3.04e-07!115;CL:0000255!3.04e-07!115 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.80e-13,43;CL:0000540,2.25e-13,33;CL:0000047,2.25e-13,33;CL:0000031,2.25e-13,33;CL:0000404,2.25e-13,33;CL:0000393,7.94e-13,39;CL:0000211,7.94e-13,39;CL:0000117,8.15e-13,23;CL:0000337,8.15e-13,23;CL:0000221,9.33e-13,44;CL:0000133,9.33e-13,44;CL:0000034,2.15e-12,97;CL:0000723,6.97e-11,91;CL:0000048,6.97e-11,91;CL:0002321,7.30e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.33e-07,73 | |||
|phase1_expression=1.12104192973356,0.697950815278722,0,0,0.500895729946347,0.503637815735669,0,1.29123323441576,0.703943610758334,0.234064526321993,0.34243593645101,0.398860794976682,1.02720437958723,0.961624426608971,1.99865857089398,1.21485160433896,3.49780939064073,0.473193248037357,0.548457734422955,1.27316895539409,0.425216450755349,1.98581902401771,3.13439746966722,0.159992422793407,0.68822784320151,1.14846392823004,0,0.430942465371778,0.380046838912748,0.504060259519861,0.443461021310609,5.08024538767705,2.46025915033828,0,0.577703239502549,1.32987716286794,1.02084678131185,1.67412652294763,0.7813353445238,1.57057123192139,0.588231488031014,0.683045484958446,0.485510353031154,0.881277725829041,0.608261587317087,1.65192076945513,0.782391344348039,3.2703773457067,1.5378032791413,1.36100929351998,2.2397827460058,1.43752564364972,0.335565212115473,0.725362142011344,1.34437519656986,3.60163210450326,1.71920063963254,2.57836046138721,6.06949382578793,10.0508286061686,9.50747105259269,3.38844532069132,3.55717918444456,3.5995988691256,3.9554654502679,1.4209602298922,4.49400165777607,5.37905627450176,7.15458324928496,17.4157660447881,5.8890989178387,5.14171771926846,6.40518768759679,5.51208596467293,8.05101956553185,6.43453150627015,3.30347642998166,1.0214987046815,1.0752457327937,4.2203612073662,11.4359554503012,6.25096044668112,3.07101298901519,1.12552522006336,1.22238598221448,7.66034322231536,7.11858403995515,5.77838282058432,1.06016670666458,0.68014404096107,1.15945795480671,0,0,0,0,0,0.561777680527007,3.2381761289831,4.41636207824877,3.5333957451034,0.14084341977668,2.56652954828636,0,0,3.46385665617943,3.29367825117628,4.54972000513305,0.22836775943812,0,0,3.12273588179045,2.74018930480927,0.922461989024234,1.3565037649736,1.29347577849275,0.376999773989026,0.494389935468748,0.144599356919912,0.884610551949874,0.647067399789637,0.220841518460394,0.969750506270444,0,0.292780797011547,1.04723353406728,0.255457055208591,2.75574786363617,2.39961092397363,1.65191295194984,0.299581278809645,0.457500602818626,1.25654352112864,0.521472960576829,0.511430914660661,0.41557608911912,0.162241263067758,1.01839363850316,0.746441823660558,0.252722758433675,0.210441855886474,3.3831315170303,3.44853156650209,2.16074555766419,3.76762044589288,1.83698547708585,1.92170580427275,0.937017245597288,0.258703370739016,3.44908788692548,0.945530400839096,2.63926686245923,1.97276159184817,1.66828349535359,2.43776516565517,1.02891068203972,0.995171334092466,0,0.51469581422943,4.54661599032948,0.621377317606506,2.11073453982987,2.52086886045421,1.65721314909647,1.96764231747404,2.00547246753592,2.55787339225449,1.3413670069981,1.16765342367169,0.493679549740441,1.47750717671186,0.162137619091711,0.730999937126662,0,0.268412837520744,0.210289948564127,1.74937841044784,0,0.264450566663544,2.98603550749328,3.71578674976702,1.03093969057675,0.605050573870028,0.889512175379481,0.570676878337677,0.949058123089023,0.823494773620054,0.251335208800269,0.994782360205754,0.38992817423824,0.898819408654221,0.216138049874694,0.597423819763102,0.948339504765408,2.39921876480431,0,1.01825663922657,2.52138233317913,0.631222379012867,0.379419222745544,0,0.31399745568275,0.123397163921801,0.592905254174298,2.16898637430922,0.786235980452812,2.69834534861824,1.01430060694251,2.65294875727659,0.50925170356284,1.15078454980324,1.13494658742525,1.64736847912849,5.75072826109418,0,1.24815069245824,1.01031551178845,0.179397413521912,0,0.923765950833023,2.65287976478679,1.62964976442026,2.8856664581782,3.28566347603903,1.50755631697634,0.714130922658041,0.975668239288994,0.157635144106191,1.10732344824387,0.478364305972461,0.491589944147214,0.518054945597687,0.433947175744535,1.50791283939272,0.54390568381871,0.983528546038072,0.551873492609465,0.80275294993896,0.35163505977661,2.13115428989678,0.757412781613119,2.83957397474631,3.51394869866975,3.23135096599198,1.91175038362042,2.00518806674155,1.13230612315533,2.02405350837447,2.04579100537918,0.790575555893047,0.642642632843614,0.99358059645788,2.67098405500883,1.79175655288934,0.989820737835213,0,2.6705869977048,3.62788268357701,0.943025398779491,1.47650946440386,1.84461088766356,0,1.09060118843252,1.06949213515416,0,0,0,0,2.34079422240703,1.94038025674132,1.28602221018955,2.30542303734956,0.891844088010353,1.81003922662333,0.608929898229199,0.938686832254841,0.847328283455281,0.220528398054962,0.98931751764888,0.807322133479528,0.72375509913787,0.835606408021955,0.164140899745061,0.582961673259701,0.18542530201051,2.05045056957423,0.82554747185289,1.66675074632741,2.82552685507037,0.410082683163076,1.37266903923914,1.18984900995699,1.6794174278839,2.76399947608848,1.90934123603023,1.58167996790568,1.42323626988794,1.62008011232702,0.836353184057875,0.436725127492355,1.88810084938749,0.41326727862668,0,0.129614973291793,0,0.56369293868419,2.0932316446157,1.32366792365678,0.583353565032143,1.93739735216597,1.520605129417,2.22978753426933,1.17183946359555,0.524296722128554,0.724752362478018,0.28803000625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| |phase1_expression=1.12104192973356,0.697950815278722,0,0,0.500895729946347,0.503637815735669,0,1.29123323441576,0.703943610758334,0.234064526321993,0.34243593645101,0.398860794976682,1.02720437958723,0.961624426608971,1.99865857089398,1.21485160433896,3.49780939064073,0.473193248037357,0.548457734422955,1.27316895539409,0.425216450755349,1.98581902401771,3.13439746966722,0.159992422793407,0.68822784320151,1.14846392823004,0,0.430942465371778,0.380046838912748,0.504060259519861,0.443461021310609,5.08024538767705,2.46025915033828,0,0.577703239502549,1.32987716286794,1.02084678131185,1.67412652294763,0.7813353445238,1.57057123192139,0.588231488031014,0.683045484958446,0.485510353031154,0.881277725829041,0.608261587317087,1.65192076945513,0.782391344348039,3.2703773457067,1.5378032791413,1.36100929351998,2.2397827460058,1.43752564364972,0.335565212115473,0.725362142011344,1.34437519656986,3.60163210450326,1.71920063963254,2.57836046138721,6.06949382578793,10.0508286061686,9.50747105259269,3.38844532069132,3.55717918444456,3.5995988691256,3.9554654502679,1.4209602298922,4.49400165777607,5.37905627450176,7.15458324928496,17.4157660447881,5.8890989178387,5.14171771926846,6.40518768759679,5.51208596467293,8.05101956553185,6.43453150627015,3.30347642998166,1.0214987046815,1.0752457327937,4.2203612073662,11.4359554503012,6.25096044668112,3.07101298901519,1.12552522006336,1.22238598221448,7.66034322231536,7.11858403995515,5.77838282058432,1.06016670666458,0.68014404096107,1.15945795480671,0,0,0,0,0,0.561777680527007,3.2381761289831,4.41636207824877,3.5333957451034,0.14084341977668,2.56652954828636,0,0,3.46385665617943,3.29367825117628,4.54972000513305,0.22836775943812,0,0,3.12273588179045,2.74018930480927,0.922461989024234,1.3565037649736,1.29347577849275,0.376999773989026,0.494389935468748,0.144599356919912,0.884610551949874,0.647067399789637,0.220841518460394,0.969750506270444,0,0.292780797011547,1.04723353406728,0.255457055208591,2.75574786363617,2.39961092397363,1.65191295194984,0.299581278809645,0.457500602818626,1.25654352112864,0.521472960576829,0.511430914660661,0.41557608911912,0.162241263067758,1.01839363850316,0.746441823660558,0.252722758433675,0.210441855886474,3.3831315170303,3.44853156650209,2.16074555766419,3.76762044589288,1.83698547708585,1.92170580427275,0.937017245597288,0.258703370739016,3.44908788692548,0.945530400839096,2.63926686245923,1.97276159184817,1.66828349535359,2.43776516565517,1.02891068203972,0.995171334092466,0,0.51469581422943,4.54661599032948,0.621377317606506,2.11073453982987,2.52086886045421,1.65721314909647,1.96764231747404,2.00547246753592,2.55787339225449,1.3413670069981,1.16765342367169,0.493679549740441,1.47750717671186,0.162137619091711,0.730999937126662,0,0.268412837520744,0.210289948564127,1.74937841044784,0,0.264450566663544,2.98603550749328,3.71578674976702,1.03093969057675,0.605050573870028,0.889512175379481,0.570676878337677,0.949058123089023,0.823494773620054,0.251335208800269,0.994782360205754,0.38992817423824,0.898819408654221,0.216138049874694,0.597423819763102,0.948339504765408,2.39921876480431,0,1.01825663922657,2.52138233317913,0.631222379012867,0.379419222745544,0,0.31399745568275,0.123397163921801,0.592905254174298,2.16898637430922,0.786235980452812,2.69834534861824,1.01430060694251,2.65294875727659,0.50925170356284,1.15078454980324,1.13494658742525,1.64736847912849,5.75072826109418,0,1.24815069245824,1.01031551178845,0.179397413521912,0,0.923765950833023,2.65287976478679,1.62964976442026,2.8856664581782,3.28566347603903,1.50755631697634,0.714130922658041,0.975668239288994,0.157635144106191,1.10732344824387,0.478364305972461,0.491589944147214,0.518054945597687,0.433947175744535,1.50791283939272,0.54390568381871,0.983528546038072,0.551873492609465,0.80275294993896,0.35163505977661,2.13115428989678,0.757412781613119,2.83957397474631,3.51394869866975,3.23135096599198,1.91175038362042,2.00518806674155,1.13230612315533,2.02405350837447,2.04579100537918,0.790575555893047,0.642642632843614,0.99358059645788,2.67098405500883,1.79175655288934,0.989820737835213,0,2.6705869977048,3.62788268357701,0.943025398779491,1.47650946440386,1.84461088766356,0,1.09060118843252,1.06949213515416,0,0,0,0,2.34079422240703,1.94038025674132,1.28602221018955,2.30542303734956,0.891844088010353,1.81003922662333,0.608929898229199,0.938686832254841,0.847328283455281,0.220528398054962,0.98931751764888,0.807322133479528,0.72375509913787,0.835606408021955,0.164140899745061,0.582961673259701,0.18542530201051,2.05045056957423,0.82554747185289,1.66675074632741,2.82552685507037,0.410082683163076,1.37266903923914,1.18984900995699,1.6794174278839,2.76399947608848,1.90934123603023,1.58167996790568,1.42323626988794,1.62008011232702,0.836353184057875,0.436725127492355,1.88810084938749,0.41326727862668,0,0.129614973291793,0,0.56369293868419,2.0932316446157,1.32366792365678,0.583353565032143,1.93739735216597,1.520605129417,2.22978753426933,1.17183946359555,0.524296722128554,0.724752362478018,0.28803000625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| ||
|short_description=p@chr17:35972946..35972978,- | |short_description=p@chr17:35972946..35972978,- | ||
}} | }} |
Latest revision as of 20:09, 4 August 2015
Short description: | p@chr17:35972946..35972978, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:35972946..35972978, - |
Coexpression cluster: | MCL_coexpression_mm9:971 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.80e-13 | 43 |
neuron | 2.25e-13 | 33 |
neuronal stem cell | 2.25e-13 | 33 |
neuroblast | 2.25e-13 | 33 |
electrically signaling cell | 2.25e-13 | 33 |
electrically responsive cell | 7.94e-13 | 39 |
electrically active cell | 7.94e-13 | 39 |
CNS neuron (sensu Vertebrata) | 8.15e-13 | 23 |
neuroblast (sensu Vertebrata) | 8.15e-13 | 23 |
ectodermal cell | 9.33e-13 | 44 |
neurectodermal cell | 9.33e-13 | 44 |
stem cell | 2.15e-12 | 97 |
somatic stem cell | 6.97e-11 | 91 |
multi fate stem cell | 6.97e-11 | 91 |
embryonic cell | 7.30e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.33e-07 | 73 |