Personal tools

UBERON:0001033: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 14: Line 14:
|obo_creation_date=
|obo_creation_date=
|subset=uberon_slim;;vertebrate_core
|subset=uberon_slim;;vertebrate_core
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
Line 20: Line 19:
|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "The sensory system used for the sense of taste.[AAO]" xsd:string
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 16:58, 26 June 2012

Name:gustatory system
Definition:"A subset of the sensory system for the sensing of taste." [Wikipedia:Gustatory_system]
Xrefs:
links:

AAO:0010577
BILA:0000143
EFO:0000830
FMA:7194
MA:0002446
MAT:0000275
MIAA:0000275
NIF_GrossAnatomy:nlx_anat_090803
SCTID:423940004
TAO:0001101
XAO:0003197

ZFA:0001101
Synonyms: "gustatory organ system" EXACT []
"taste system" EXACT []
Comments:in ZFA and MA this is a subtype of sensory system. we should change sensory system to disambiguate parts and wholes
Alt_id: UBERON:FBbt_00005159-FMA_7194-MA_0002446-MIAA_0000275-ZFA_0001101
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000467(anatomical system)
disjoint_from:UBERON:0001434(skeletal system),UBERON:0002204(musculoskeletal system),UBERON:0002294(biliary system),UBERON:0002330(exocrine system),UBERON:0002390(hematopoietic system),UBERON:0002405(immune system),UBERON:0002416(integumental system),UBERON:0002423(hepatobiliary system),UBERON:0004456(entire sense organ system)



Children

disjoint from:UBERON:0000949 (endocrine system),UBERON:0000990 (reproductive system),UBERON:0001004 (respiratory system),UBERON:0001007 (digestive system),UBERON:0001008 (renal system),UBERON:0001009 (circulatory system),UBERON:0001016 (nervous system)
part of:UBERON:0001723 (tongue)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001033 (gustatory system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
8.98e-131FFCP PHASE2:Hg19::chr5:147715119..147715124,+#_df8fb477f41b6991bc92665718c20407p1@SPINK9
8.98e-131FFCP PHASE1:Hg19::chr5:147715119..147715124,+#_df8fb477f41b6991bc92665718c20407p1@SPINK9
6.24e-88FFCP PHASE1:Hg19::chr2:106128079..106128106,+#_9fb678304ef326dad3e48dd940e1e89ep@chr2:106128079..106128106, +
6.24e-88FFCP PHASE2:Hg19::chr9:136184568..136184572,+#_9fb678304ef326dad3e48dd940e1e89ep1@LCN1P2
6.24e-88FFCP PHASE1:Hg19::chr13:103555720..103555725,+#_9fb678304ef326dad3e48dd940e1e89ep@chr13:103555720..103555725, +
6.24e-88FFCP PHASE2:Hg19::chr13:103555720..103555725,+#_9fb678304ef326dad3e48dd940e1e89ep@chr13:103555720..103555725, +
6.24e-88FFCP PHASE1:Hg19::chr9:136184568..136184572,+#_9fb678304ef326dad3e48dd940e1e89ep1@LCN1P2
6.24e-88FFCP PHASE2:Hg19::chr2:106128079..106128106,+#_9fb678304ef326dad3e48dd940e1e89ep@chr2:106128079..106128106, +
9.74e-88FFCP PHASE2:Hg19::chr11:1955193..1955200,+#_5df9186ea5a391717c54b560fa8580bap23@TNNT3
9.74e-88FFCP PHASE2:Hg19::chr20:2321399..2321407,+#_5df9186ea5a391717c54b560fa8580bap@chr20:2321399..2321407, +
9.74e-88FFCP PHASE2:Hg19::chr19:36018336..36018343,-#_5df9186ea5a391717c54b560fa8580bap@chr19:36018336..36018343, -
9.74e-88FFCP PHASE1:Hg19::chr11:1955193..1955200,+#_5df9186ea5a391717c54b560fa8580bap23@TNNT3
9.74e-88FFCP PHASE1:Hg19::chr20:2321399..2321407,+#_5df9186ea5a391717c54b560fa8580bap@chr20:2321399..2321407, +
9.74e-88FFCP PHASE1:Hg19::chr19:36018336..36018343,-#_5df9186ea5a391717c54b560fa8580bap@chr19:36018336..36018343, -
9.74e-88FFCP PHASE1:Hg19::chr12:53243246..53243253,-#_5df9186ea5a391717c54b560fa8580bap3@KRT78
9.74e-88FFCP PHASE2:Hg19::chr12:53243246..53243253,-#_5df9186ea5a391717c54b560fa8580bap3@KRT78
1.52e-87FFCP PHASE1:Hg19::chr9:138415792..138415799,+#_04523b9fcc9d07d1feb011f0212c901ap@chr9:138415792..138415799, +
1.52e-87FFCP PHASE1:Hg19::chr6:17280912..17280921,+#_04523b9fcc9d07d1feb011f0212c901ap@chr6:17280912..17280921, +
1.52e-87FFCP PHASE1:Hg19::chr12:53242592..53242631,-#_04523b9fcc9d07d1feb011f0212c901ap4@KRT78
1.52e-87FFCP PHASE2:Hg19::chr12:53242592..53242631,-#_04523b9fcc9d07d1feb011f0212c901ap4@KRT78
1.52e-87FFCP PHASE2:Hg19::chr20:31829188..31829201,+#_04523b9fcc9d07d1feb011f0212c901ap@chr20:31829188..31829201, +
1.52e-87FFCP PHASE1:Hg19::chr4:71347512..71347523,+#_04523b9fcc9d07d1feb011f0212c901ap@chr4:71347512..71347523, +
1.52e-87FFCP PHASE1:Hg19::chr12:3660787..3660789,-#_04523b9fcc9d07d1feb011f0212c901ap@chr12:3660787..3660789, -
1.52e-87FFCP PHASE2:Hg19::chr12:3660787..3660789,-#_04523b9fcc9d07d1feb011f0212c901ap@chr12:3660787..3660789, -
1.52e-87FFCP PHASE1:Hg19::chr20:31829188..31829201,+#_04523b9fcc9d07d1feb011f0212c901ap@chr20:31829188..31829201, +
1.52e-87FFCP PHASE2:Hg19::chr9:138415792..138415799,+#_04523b9fcc9d07d1feb011f0212c901ap@chr9:138415792..138415799, +
1.52e-87FFCP PHASE2:Hg19::chr6:17280912..17280921,+#_04523b9fcc9d07d1feb011f0212c901ap@chr6:17280912..17280921, +
1.52e-87FFCP PHASE2:Hg19::chr4:71347512..71347523,+#_04523b9fcc9d07d1feb011f0212c901ap@chr4:71347512..71347523, +
3.07e-86FFCP PHASE1:Mm9::chr8:27934890..27934902,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr8:27934890..27934902, -
3.07e-86FFCP PHASE1:Mm9::chr1:16804330..16804337,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr1:16804330..16804337, +
3.07e-86FFCP PHASE1:Mm9::chr19:34035674..34035677,+#_b621d6616d7fe4b4be78cce43fc1c40ep3@Lipf
3.07e-86FFCP PHASE1:Mm9::chr16:22918005..22918008,+#_b621d6616d7fe4b4be78cce43fc1c40ep12@Fetub
3.07e-86FFCP PHASE2:Mm9::chr18:70404072..70404082,-#_b621d6616d7fe4b4be78cce43fc1c40ep3@2310002L13Rik
3.07e-86FFCP PHASE2:Mm9::chr4:132626792..132626797,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr4:132626792..132626797, -
3.07e-86FFCP PHASE2:Mm9::chr5:64359159..64359160,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr5:64359159..64359160, +
3.07e-86FFCP PHASE2:Mm9::chr16:42166864..42166867,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr16:42166864..42166867, +
3.07e-86FFCP PHASE2:Mm9::chr2:154026044..154026056,+#_b621d6616d7fe4b4be78cce43fc1c40ep6@Bpifb1
3.07e-86FFCP PHASE2:Mm9::chr17:24092235..24092269,-#_b621d6616d7fe4b4be78cce43fc1c40ep1@Sbpl
3.07e-86FFCP PHASE1:Mm9::chr2:129864186..129864212,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr2:129864186..129864212, +
3.07e-86FFCP PHASE2:Mm9::chr1:16804330..16804337,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr1:16804330..16804337, +
3.07e-86FFCP PHASE2:Mm9::chr19:34045308..34045320,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr19:34045308..34045320, +
3.07e-86FFCP PHASE2:Mm9::chr16:22918330..22918340,+#_b621d6616d7fe4b4be78cce43fc1c40ep11@Fetub
3.07e-86FFCP PHASE2:Mm9::chr11:118524835..118524836,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr11:118524835..118524836, -
3.07e-86FFCP PHASE2:Mm9::chr19:34035674..34035677,+#_b621d6616d7fe4b4be78cce43fc1c40ep3@Lipf
3.07e-86FFCP PHASE1:Mm9::chr19:34041399..34041412,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr19:34041399..34041412, -
3.07e-86FFCP PHASE2:Mm9::chr18:70435860..70435867,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr18:70435860..70435867, -
3.07e-86FFCP PHASE1:Mm9::chr17:24092235..24092269,-#_b621d6616d7fe4b4be78cce43fc1c40ep1@Sbpl
3.07e-86FFCP PHASE1:Mm9::chr16:18588865..18588877,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr16:18588865..18588877, -
3.07e-86FFCP PHASE1:Mm9::chr5:64359159..64359160,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr5:64359159..64359160, +
3.07e-86FFCP PHASE2:Mm9::chr19:34041399..34041412,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr19:34041399..34041412, -
3.07e-86FFCP PHASE1:Mm9::chr11:99699383..99699387,-#_b621d6616d7fe4b4be78cce43fc1c40ep1@2300003K06Rik
3.07e-86FFCP PHASE1:Mm9::chr4:132626792..132626797,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr4:132626792..132626797, -
3.07e-86FFCP PHASE1:Mm9::chr1:16804378..16804385,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr1:16804378..16804385, +
3.07e-86FFCP PHASE1:Mm9::chr16:22918330..22918340,+#_b621d6616d7fe4b4be78cce43fc1c40ep11@Fetub
3.07e-86FFCP PHASE1:Mm9::chr6:93765798..93765806,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr6:93765798..93765806, -
3.07e-86FFCP PHASE1:Mm9::chr2:153700714..153700723,+#_b621d6616d7fe4b4be78cce43fc1c40ep2@Bpifb2
3.07e-86FFCP PHASE2:Mm9::chr11:99699383..99699387,-#_b621d6616d7fe4b4be78cce43fc1c40ep1@2300003K06Rik
3.07e-86FFCP PHASE2:Mm9::chr2:154026059..154026070,+#_b621d6616d7fe4b4be78cce43fc1c40ep8@Bpifb1
3.07e-86FFCP PHASE2:Mm9::chr17:24092296..24092324,-#_b621d6616d7fe4b4be78cce43fc1c40ep2@Sbpl
3.07e-86FFCP PHASE1:Mm9::chr2:129870352..129870357,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr2:129870352..129870357, +
3.07e-86FFCP PHASE2:Mm9::chr1:16804378..16804385,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr1:16804378..16804385, +
3.07e-86FFCP PHASE1:Mm9::chr1:36155397..36155406,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr1:36155397..36155406, -
3.07e-86FFCP PHASE2:Mm9::chr16:22918343..22918350,+#_b621d6616d7fe4b4be78cce43fc1c40ep13@Fetub
3.07e-86FFCP PHASE1:Mm9::chr11:99946757..99946762,-#_b621d6616d7fe4b4be78cce43fc1c40ep4@Krt32
3.07e-86FFCP PHASE2:Mm9::chr2:129864186..129864212,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr2:129864186..129864212, +
3.07e-86FFCP PHASE1:Mm9::chr18:70404027..70404032,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr18:70404027..70404032, -
3.07e-86FFCP PHASE1:Mm9::chr19:34043253..34043264,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr19:34043253..34043264, +
3.07e-86FFCP PHASE2:Mm9::chr2:153700714..153700723,+#_b621d6616d7fe4b4be78cce43fc1c40ep2@Bpifb2
3.07e-86FFCP PHASE2:Mm9::chr8:27934890..27934902,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr8:27934890..27934902, -
3.07e-86FFCP PHASE1:Mm9::chr17:24092296..24092324,-#_b621d6616d7fe4b4be78cce43fc1c40ep2@Sbpl
3.07e-86FFCP PHASE2:Mm9::chr2:120942174..120942183,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr2:120942174..120942183, -
3.07e-86FFCP PHASE2:Mm9::chr19:34043253..34043264,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr19:34043253..34043264, +
3.07e-86FFCP PHASE1:Mm9::chr19:34050959..34050968,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr19:34050959..34050968, +
3.07e-86FFCP PHASE2:Mm9::chr11:99946757..99946762,-#_b621d6616d7fe4b4be78cce43fc1c40ep4@Krt32
3.07e-86FFCP PHASE1:Mm9::chr16:22918343..22918350,+#_b621d6616d7fe4b4be78cce43fc1c40ep13@Fetub
3.07e-86FFCP PHASE2:Mm9::chr2:154026088..154026101,+#_b621d6616d7fe4b4be78cce43fc1c40ep5@Bpifb1
3.07e-86FFCP PHASE1:Mm9::chr2:129874079..129874084,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr2:129874079..129874084, -
3.07e-86FFCP PHASE1:Mm9::chr2:154026044..154026056,+#_b621d6616d7fe4b4be78cce43fc1c40ep6@Bpifb1
3.07e-86FFCP PHASE2:Mm9::chr19:34050959..34050968,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr19:34050959..34050968, +
3.07e-86FFCP PHASE1:Mm9::chr16:42166864..42166867,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr16:42166864..42166867, +
3.07e-86FFCP PHASE1:Mm9::chr2:120942174..120942183,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr2:120942174..120942183, -
3.07e-86FFCP PHASE2:Mm9::chr6:93765798..93765806,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr6:93765798..93765806, -
3.07e-86FFCP PHASE1:Mm9::chr18:70404043..70404049,-#_b621d6616d7fe4b4be78cce43fc1c40ep6@2310002L13Rik
3.07e-86FFCP PHASE1:Mm9::chr19:34045246..34045251,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr19:34045246..34045251, +
3.07e-86FFCP PHASE2:Mm9::chr8:95903671..95903681,-#_b621d6616d7fe4b4be78cce43fc1c40ep3@Ces1h
3.07e-86FFCP PHASE2:Mm9::chr18:70404027..70404032,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr18:70404027..70404032, -
3.07e-86FFCP PHASE2:Mm9::chr8:112138317..112138321,+#_b621d6616d7fe4b4be78cce43fc1c40ep2@Pkd1l3
3.07e-86FFCP PHASE2:Mm9::chr2:120942190..120942201,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr2:120942190..120942201, -
3.07e-86FFCP PHASE1:Mm9::chr11:118524835..118524836,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr11:118524835..118524836, -
3.07e-86FFCP PHASE2:Mm9::chr19:34045246..34045251,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr19:34045246..34045251, +
3.07e-86FFCP PHASE1:Mm9::chr19:34051208..34051222,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr19:34051208..34051222, +
3.07e-86FFCP PHASE2:Mm9::chr7:149031277..149031282,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr7:149031277..149031282, +
3.07e-86FFCP PHASE1:Mm9::chr8:112138317..112138321,+#_b621d6616d7fe4b4be78cce43fc1c40ep2@Pkd1l3
3.07e-86FFCP PHASE1:Mm9::chr19:34039030..34039042,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr19:34039030..34039042, +
3.07e-86FFCP PHASE1:Mm9::chr1:153097852..153097857,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr1:153097852..153097857, -
3.07e-86FFCP PHASE1:Mm9::chr8:95903671..95903681,-#_b621d6616d7fe4b4be78cce43fc1c40ep3@Ces1h
3.07e-86FFCP PHASE1:Mm9::chr2:154026059..154026070,+#_b621d6616d7fe4b4be78cce43fc1c40ep8@Bpifb1
3.07e-86FFCP PHASE2:Mm9::chr19:34051208..34051222,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr19:34051208..34051222, +
3.07e-86FFCP PHASE2:Mm9::chr2:129870352..129870357,+#_b621d6616d7fe4b4be78cce43fc1c40ep@chr2:129870352..129870357, +
3.07e-86FFCP PHASE1:Mm9::chr2:120942190..120942201,-#_b621d6616d7fe4b4be78cce43fc1c40ep@chr2:120942190..120942201, -










Property "Property value" (as page type) with input value "UBPROP:0000001 "The sensory system used for the sense of taste.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.