UBERON:0006553: Difference between revisions
From FANTOM5_SSTAR
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|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0002113 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:42, 27 June 2012
| Name: | renal duct | ||
|---|---|---|---|
| Definition: | "A tube in the kidney that collect and transport urine." [ZFIN:ZDB-PUB-071029-9] | ||
| Xrefs: |
| ||
| Comments: | in ZFA this is defined as part of mesonephros |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000058(duct),UBERON:0006554(urinary system structure) |
|---|---|
| part_of: | UBERON:0002113(kidney) |
Children
| is a: | UBERON:0009201 (nephric duct) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006553 (renal duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.58e-86 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_c996e4a6607e53096692777a1b938268 | p4@Spink12 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_c996e4a6607e53096692777a1b938268 | p4@Spink12 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:35930706..35930717,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:35930706..35930717, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:164787162..164787188,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:164787162..164787188, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379437..31379448,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:31379437..31379448, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:24670830..24670845,+#_9b3409e528ac533dfd8475c41e23287d | p@chr17:24670830..24670845, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:75304900..75304907,+#_9b3409e528ac533dfd8475c41e23287d | p@chr15:75304900..75304907, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:85390145..85390153,+#_9b3409e528ac533dfd8475c41e23287d | p@chr10:85390145..85390153, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:87922778..87922788,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:87922778..87922788, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:39707572..39707583,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:39707572..39707583, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:65995799..65995810,-#_9b3409e528ac533dfd8475c41e23287d | p@chr7:65995799..65995810, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21380610..21380620,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21380610..21380620, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:98567868..98567884,-#_9b3409e528ac533dfd8475c41e23287d | p5@Med24 |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:130496166..130496188,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:130496166..130496188, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:104945515..104945524,-#_9b3409e528ac533dfd8475c41e23287d | p@chr12:104945515..104945524, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:63611214..63611229,+#_9b3409e528ac533dfd8475c41e23287d | p@chr14:63611214..63611229, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379845..31379855,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:31379845..31379855, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:130496260..130496269,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:130496260..130496269, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26785438..26785446,-#_9b3409e528ac533dfd8475c41e23287d | p3@Acad8 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:17224952..17224968,+#_9b3409e528ac533dfd8475c41e23287d | p@chr11:17224952..17224968, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:67453354..67453365,-#_9b3409e528ac533dfd8475c41e23287d | p@chr14:67453354..67453365, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:137325863..137325870,-#_9b3409e528ac533dfd8475c41e23287d | p15@Alpl |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21378296..21378303,+#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21378296..21378303, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:83487114..83487124,-#_9b3409e528ac533dfd8475c41e23287d | p@chr6:83487114..83487124, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:23045782..23045791,+#_9b3409e528ac533dfd8475c41e23287d | p@chr8:23045782..23045791, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21378766..21378781,+#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21378766..21378781, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:92995710..92995753,+#_9b3409e528ac533dfd8475c41e23287d | p@chr16:92995710..92995753, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101959159..101959163,+#_9b3409e528ac533dfd8475c41e23287d | p@chr11:101959159..101959163, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:54678902..54678911,-#_9b3409e528ac533dfd8475c41e23287d | p@chr15:54678902..54678911, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:63779573..63779582,+#_9b3409e528ac533dfd8475c41e23287d | p@chr11:63779573..63779582, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152302739..152302742,+#_9b3409e528ac533dfd8475c41e23287d | p5@Defb20 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:53955299..53955306,+#_9b3409e528ac533dfd8475c41e23287d | p@chr11:53955299..53955306, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr6:147624258..147624285,-#_9b3409e528ac533dfd8475c41e23287d | p@chr6:147624258..147624285, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:50280199..50280211,+#_9b3409e528ac533dfd8475c41e23287d | p@chrX:50280199..50280211, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21381777..21381789,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21381777..21381789, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:10488683..10488691,+#_9b3409e528ac533dfd8475c41e23287d | p@chrX:10488683..10488691, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26719400..26719404,-#_9b3409e528ac533dfd8475c41e23287d | p@chr9:26719400..26719404, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr19:17585885..17585901,-#_9b3409e528ac533dfd8475c41e23287d | p@chr19:17585885..17585901, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:90155966..90155989,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:90155966..90155989, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:75347689..75347703,+#_9b3409e528ac533dfd8475c41e23287d | p@chr15:75347689..75347703, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:164479326..164479336,+#_9b3409e528ac533dfd8475c41e23287d | p@chr2:164479326..164479336, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:100350777..100350782,+#_9b3409e528ac533dfd8475c41e23287d | p@chr9:100350777..100350782, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:23057222..23057234,+#_9b3409e528ac533dfd8475c41e23287d | p1@Defb13 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:31507623..31507631,+#_9b3409e528ac533dfd8475c41e23287d | p4@Atp4a |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:155698166..155698174,-#_9b3409e528ac533dfd8475c41e23287d | p@chr1:155698166..155698174, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51677155..51677162,-#_9b3409e528ac533dfd8475c41e23287d | p5@Rnase12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21378968..21378988,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21378968..21378988, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:35252614..35252635,-#_9b3409e528ac533dfd8475c41e23287d | p3@Ly6g5b |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:105313229..105313234,-#_9b3409e528ac533dfd8475c41e23287d | p17@Capn5 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:113585667..113585673,-#_9b3409e528ac533dfd8475c41e23287d | p@chr8:113585667..113585673, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:152302768..152302774,+#_9b3409e528ac533dfd8475c41e23287d | p4@Defb20 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35651764..35651782,-#_9b3409e528ac533dfd8475c41e23287d | p2@9230110F15Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:101958876..101958883,+#_9b3409e528ac533dfd8475c41e23287d | p@chr11:101958876..101958883, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:89597725..89597743,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:89597725..89597743, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:25349402..25349409,-#_9b3409e528ac533dfd8475c41e23287d | p3@Lcn12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:151927980..151927988,+#_9b3409e528ac533dfd8475c41e23287d | p@chr7:151927980..151927988, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr3:103650730..103650741,+#_9b3409e528ac533dfd8475c41e23287d | p@chr3:103650730..103650741, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:66513886..66513897,-#_9b3409e528ac533dfd8475c41e23287d | p@chr5:66513886..66513897, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:90155951..90155962,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:90155951..90155962, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:46301295..46301302,-#_9b3409e528ac533dfd8475c41e23287d | p@chr18:46301295..46301302, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:18213651..18213663,-#_9b3409e528ac533dfd8475c41e23287d | p1@Defb44-ps |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21378766..21378781,+#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21378766..21378781, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:51627586..51627595,+#_9b3409e528ac533dfd8475c41e23287d | p4@Rnase10 |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:50280126..50280140,+#_9b3409e528ac533dfd8475c41e23287d | p@chrX:50280126..50280140, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379845..31379855,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:31379845..31379855, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164499572..164499580,-#_9b3409e528ac533dfd8475c41e23287d | p2@Wfdc11 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379107..21379136,+#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21379107..21379136, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:75347689..75347703,+#_9b3409e528ac533dfd8475c41e23287d | p@chr15:75347689..75347703, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:66513886..66513897,-#_9b3409e528ac533dfd8475c41e23287d | p@chr5:66513886..66513897, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:59845349..59845371,-#_9b3409e528ac533dfd8475c41e23287d | p@chr11:59845349..59845371, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:152302836..152302841,+#_9b3409e528ac533dfd8475c41e23287d | p6@Defb20 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:63611214..63611229,+#_9b3409e528ac533dfd8475c41e23287d | p@chr14:63611214..63611229, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:19141429..19141440,+#_9b3409e528ac533dfd8475c41e23287d | p@chr8:19141429..19141440, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25349488..25349492,-#_9b3409e528ac533dfd8475c41e23287d | p6@Lcn12 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:110131571..110131579,-#_9b3409e528ac533dfd8475c41e23287d | p15@Wars |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:28772042..28772046,-#_9b3409e528ac533dfd8475c41e23287d | p@chr10:28772042..28772046, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:147624258..147624285,-#_9b3409e528ac533dfd8475c41e23287d | p@chr6:147624258..147624285, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:19141371..19141383,+#_9b3409e528ac533dfd8475c41e23287d | p@chr8:19141371..19141383, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:24270118..24270122,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:24270118..24270122, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:34107562..34107572,-#_9b3409e528ac533dfd8475c41e23287d | p@chr11:34107562..34107572, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:150092027..150092070,-#_9b3409e528ac533dfd8475c41e23287d | p@chr4:150092027..150092070, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152302836..152302841,+#_9b3409e528ac533dfd8475c41e23287d | p6@Defb20 |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:164787162..164787188,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:164787162..164787188, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr3:103650758..103650778,+#_9b3409e528ac533dfd8475c41e23287d | p@chr3:103650758..103650778, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr19:17591760..17591765,+#_9b3409e528ac533dfd8475c41e23287d | p@chr19:17591760..17591765, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:52542831..52542836,-#_9b3409e528ac533dfd8475c41e23287d | p4@Rnase13 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26610184..26610191,-#_9b3409e528ac533dfd8475c41e23287d | p4@Glb1l2 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379306..21379315,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21379306..21379315, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:148445639..148445665,+#_9b3409e528ac533dfd8475c41e23287d | p@chr7:148445639..148445665, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:51680551..51680555,-#_9b3409e528ac533dfd8475c41e23287d | p@chr14:51680551..51680555, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:148445639..148445665,+#_9b3409e528ac533dfd8475c41e23287d | p@chr7:148445639..148445665, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:12571771..12571780,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:12571771..12571780, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:54678915..54678922,-#_9b3409e528ac533dfd8475c41e23287d | p@chr15:54678915..54678922, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379454..31379466,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:31379454..31379466, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:12571771..12571780,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:12571771..12571780, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:25752228..25752237,+#_9b3409e528ac533dfd8475c41e23287d | p@chr16:25752228..25752237, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:116901496..116901514,-#_9b3409e528ac533dfd8475c41e23287d | p1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:164480465..164480471,-#_9b3409e528ac533dfd8475c41e23287d | p2@Wfdc9 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:96140694..96140720,+#_9b3409e528ac533dfd8475c41e23287d | p@chr11:96140694..96140720, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:25706249..25706254,+#_9b3409e528ac533dfd8475c41e23287d | p@chr8:25706249..25706254, + |
