UBERON:0010133: Difference between revisions
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|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0001016 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:45, 27 June 2012
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002368(endocrine gland),UBERON:0004121(ectoderm-derived structure) |
|---|---|
| part_of: | UBERON:0001016(nervous system) |
Children
| is a: | UBERON:0000007 (pituitary gland),UBERON:0010134 (secretory circumventricular organ) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10160-103A7 (pineal gland, adult, donor10252)
- 10162-103A9 (pituitary gland, adult, donor10252)
- 10179-103C8 (pineal gland - adult, donor10196)
- 10180-103C9 (pituitary gland - adult, donor10196)
- 10377-105G8 (pineal gland, adult, donor10258)
- 10378-105G9 (pituitary gland, adult, donor10258)
- 11649-122E2
- 11726-123D7
- 11744-123F7
- 1265-44F5 (pituitary gland, embryo E17)
... further results Mouse (Mus musculus)
- 10160-103A7 (pineal gland, adult, donor10252)
- 10162-103A9 (pituitary gland, adult, donor10252)
- 10179-103C8 (pineal gland - adult, donor10196)
- 10180-103C9 (pituitary gland - adult, donor10196)
- 10377-105G8 (pineal gland, adult, donor10258)
- 10378-105G9 (pituitary gland, adult, donor10258)
- 11649-122E2
- 11726-123D7
- 11744-123F7
- 1265-44F5 (pituitary gland, embryo E17)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010133 (neuroendocrine gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.57e-195 | FFCP PHASE1:Hg19::chr19:7979708..7979734,+#_f13cd36ed01f3db2171f12b6116a6ff9 | p@chr19:7979708..7979734, + |
| 2.57e-195 | FFCP PHASE2:Hg19::chr19:7979708..7979734,+#_f13cd36ed01f3db2171f12b6116a6ff9 | p@chr19:7979708..7979734, + |
| 1.0e-156 | FFCP PHASE1:Hg19::chr5:136328571..136328599,-#_5514584a7e1112c80965a17d50ebf3f8 | p11@SPOCK1 |
| 1.0e-156 | FFCP PHASE2:Hg19::chr5:136328571..136328599,-#_5514584a7e1112c80965a17d50ebf3f8 | p11@SPOCK1 |
| 1.5e-156 | FFCP PHASE2:Hg19::chr12:128210626..128210641,-#_cfc62a643d1f2213b7a2455041210e56 | p@chr12:128210626..128210641, - |
| 1.5e-156 | FFCP PHASE1:Hg19::chr12:128210626..128210641,-#_cfc62a643d1f2213b7a2455041210e56 | p@chr12:128210626..128210641, - |
| 6.94e-147 | FFCP PHASE2:Hg19::chr19:49519930..49519937,-#_439b5ab41632d127d66fbe369abc022d | p@chr19:49519930..49519937, - |
| 6.94e-147 | FFCP PHASE2:Hg19::chr19:7979644..7979653,+#_439b5ab41632d127d66fbe369abc022d | p@chr19:7979644..7979653, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chr19:49519930..49519937,-#_439b5ab41632d127d66fbe369abc022d | p@chr19:49519930..49519937, - |
| 6.94e-147 | FFCP PHASE2:Hg19::chr19:49520344..49520367,-#_439b5ab41632d127d66fbe369abc022d | p1@LHB |
| 6.94e-147 | FFCP PHASE1:Hg19::chr19:7979644..7979653,+#_439b5ab41632d127d66fbe369abc022d | p@chr19:7979644..7979653, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chr19:49520344..49520367,-#_439b5ab41632d127d66fbe369abc022d | p1@LHB |
| 6.94e-147 | FFCP PHASE2:Hg19::chr19:7979677..7979703,+#_439b5ab41632d127d66fbe369abc022d | p@chr19:7979677..7979703, + |
| 6.94e-147 | FFCP PHASE1:Hg19::chr19:7979677..7979703,+#_439b5ab41632d127d66fbe369abc022d | p@chr19:7979677..7979703, + |
| 2.79e-131 | FFCP PHASE1:Hg19::chr1:99693441..99693485,-#_fcc32c2376aa500a242e848747009898 | p@chr1:99693441..99693485, - |
| 2.79e-131 | FFCP PHASE2:Hg19::chr1:99693441..99693485,-#_fcc32c2376aa500a242e848747009898 | p@chr1:99693441..99693485, - |
| 1.07e-130 | FFCP PHASE1:Hg19::chr5:133772179..133772191,+#_bc3de8f58559da33a88b004fc6e94030 | p5@ENST00000513329 |
| 1.07e-130 | FFCP PHASE2:Hg19::chr5:133772179..133772191,+#_bc3de8f58559da33a88b004fc6e94030 | p5@ENST00000513329 |
| 1.0e-112 | FFCP PHASE1:Hg19::chr5:141783725..141783734,+#_d8bb02656b15580ecfe68c419d3ff8df | p3@ENST00000443800 |
| 1.0e-112 | FFCP PHASE2:Hg19::chr5:141783725..141783734,+#_d8bb02656b15580ecfe68c419d3ff8df | p3@ENST00000443800 |
| 1.76e-111 | FFCP PHASE1:Hg19::chr9:139096968..139096979,-#_924e67058d0974468325bc0c706a87e9 | p2@LHX3 |
| 1.76e-111 | FFCP PHASE2:Hg19::chr9:139096968..139096979,-#_924e67058d0974468325bc0c706a87e9 | p2@LHX3 |
| 8.91e-111 | FFCP PHASE1:Hg19::chr22:47126639..47126654,+#_3171f7569b31dd41dcf17597798614a4 | p@chr22:47126639..47126654, + |
| 8.91e-111 | FFCP PHASE2:Hg19::chr22:47126639..47126654,+#_3171f7569b31dd41dcf17597798614a4 | p@chr22:47126639..47126654, + |
| 2.76e-110 | FFCP PHASE1:Hg19::chr4:1233005..1233017,+#_37a84fd160266237ee3bcd87757f3841 | p@chr4:1233005..1233017, + |
| 2.76e-110 | FFCP PHASE2:Hg19::chr11:75194071..75194110,-#_37a84fd160266237ee3bcd87757f3841 | p@chr11:75194071..75194110, - |
| 2.76e-110 | FFCP PHASE1:Hg19::chr11:75194071..75194110,-#_37a84fd160266237ee3bcd87757f3841 | p@chr11:75194071..75194110, - |
| 2.76e-110 | FFCP PHASE2:Hg19::chr4:1233005..1233017,+#_37a84fd160266237ee3bcd87757f3841 | p@chr4:1233005..1233017, + |
| 2.76e-110 | FFCP PHASE2:Hg19::chr15:71228905..71228915,+#_37a84fd160266237ee3bcd87757f3841 | p17@LRRC49 |
| 2.76e-110 | FFCP PHASE1:Hg19::chr15:71228905..71228915,+#_37a84fd160266237ee3bcd87757f3841 | p17@LRRC49 |
| 5.02e-99 | FFCP PHASE1:Hg19::chr12:128210666..128210685,-#_8c62d767d42a86007ecf84b7efb7b088 | p@chr12:128210666..128210685, - |
| 5.02e-99 | FFCP PHASE2:Hg19::chr12:128210666..128210685,-#_8c62d767d42a86007ecf84b7efb7b088 | p@chr12:128210666..128210685, - |
| 1.38e-98 | FFCP PHASE1:Hg19::chr9:139095116..139095139,+#_f4da311a38164dc15ff212a45bb07beb | p@chr9:139095116..139095139, + |
| 1.38e-98 | FFCP PHASE2:Hg19::chr9:139095116..139095139,+#_f4da311a38164dc15ff212a45bb07beb | p@chr9:139095116..139095139, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:135522475..135522486,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p16@ZFAT |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:99860883..99860921,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr1:99860883..99860921, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:135504353..135504365,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135504353..135504365, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr19:49519357..49519372,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p1@CU678753 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:22290499..22290506,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr6:22290499..22290506, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:18041244..18041266,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr11:18041244..18041266, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:136328601..136328607,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p25@SPOCK1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:22287728..22287735,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr6:22287728..22287735, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr19:49519519..49519562,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p2@CU678753 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:84530787..84530803,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr11:84530787..84530803, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:87325636..87325643,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p2@POU1F1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:9178561..9178568,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr7:9178561..9178568, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chrX:33146637..33146644,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p35@DMD |
| 1.55e-98 | FFCP PHASE2:Hg19::chr10:18580269..18580290,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr10:18580269..18580290, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:61996160..61996176,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p3@GH1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:135473063..135473075,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135473063..135473075, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:99734965..99734976,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr12:99734965..99734976, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:22287728..22287735,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr6:22287728..22287735, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr16:18036005..18036011,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr16:18036005..18036011, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:87751918..87751928,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:87751918..87751928, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr18:56963107..56963117,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr18:56963107..56963117, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:61995906..61995914,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p6@AB591020 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:20985690..20985695,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p38@KCNIP4 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:204667243..204667248,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr1:204667243..204667248, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:9178561..9178568,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr7:9178561..9178568, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:18067959..18067962,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr11:18067959..18067962, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:135473063..135473075,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135473063..135473075, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr13:52650530..52650533,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr13:52650530..52650533, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:61995432..61995458,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr17:61995432..61995458, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:48705144..48705150,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr2:48705144..48705150, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:70178863..70178874,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr11:70178863..70178874, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:241080084..241080093,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p5@OTOS |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:135504353..135504365,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135504353..135504365, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:216447425..216447432,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p2@ENST00000457625 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:1352813..1352818,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr4:1352813..1352818, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:9782610..9782613,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr7:9782610..9782613, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:18039672..18039678,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr11:18039672..18039678, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr13:21399081..21399087,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr13:21399081..21399087, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:18067904..18067908,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr11:18067904..18067908, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr9:137539895..137539904,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr9:137539895..137539904, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:6956383..6956390,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr12:6956383..6956390, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:22294718..22294725,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p11@PRL |
| 1.55e-98 | FFCP PHASE1:Hg19::chr16:18066345..18066365,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr16:18066345..18066365, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:121088132..121088135,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p15@CABP1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr15:55470984..55471009,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr15:55470984..55471009, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:135473748..135473753,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135473748..135473753, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:87751918..87751928,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:87751918..87751928, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr16:51175701..51175708,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr16:51175701..51175708, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr13:52650541..52650548,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr13:52650541..52650548, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr9:137539895..137539904,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr9:137539895..137539904, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr15:47662877..47662880,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr15:47662877..47662880, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:55422293..55422300,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr12:55422293..55422300, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:22294718..22294725,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p11@PRL |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:17040158..17040170,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr2:17040158..17040170, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:45782019..45782028,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr1:45782019..45782028, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:192894646..192894653,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p2@ENST00000414895 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:22290440..22290455,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr6:22290440..22290455, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr16:51174216..51174239,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr16:51174216..51174239, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:135732675..135732680,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p3@ENST00000514282 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:9194488..9194491,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr7:9194488..9194491, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:49621641..49621650,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p22@TUBA1C |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:135473748..135473753,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:135473748..135473753, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:57914395..57914398,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr1:57914395..57914398, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr14:55282406..55282415,-#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr14:55282406..55282415, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:1066886..1066919,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr8:1066886..1066919, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:9782610..9782613,+#_16bda1cbf03ffc1c3e661cf4c80f9d91 | p@chr7:9782610..9782613, + |
