FFCP PHASE1:Hg19::chr6:56258957..56258965,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000039!3.17e-26!7;CL:0000586!3.17e-26!7;CL:1000415!2.47e-11!2;CL:0001014!3.02e-11!2;CL:0001016!3.02e-11!2 | |ontology_enrichment_celltype=CL:0000039!3.17e-26!7;CL:0000586!3.17e-26!7;CL:1000415!2.47e-11!2;CL:0001014!3.02e-11!2;CL:0001016!3.02e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.40e-29;7!CL:0000586;3.40e-29;7!CL:1000415;8.10e-26;2!CL:0000083;1.00e-13;4 | |ontology_enrichment_celltype_v019=CL:0000039;3.40e-29;7!CL:0000586;3.40e-29;7!CL:1000415;8.10e-26;2!CL:0000083;1.00e-13;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.16e-29,7;CL:0000586,3.16e-29,7;CL:1000415,9.18e-26,2;CL:0000083,1.00e-13,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1799!1.88e-21!1;DOID:10165!1.88e-21!1;DOID:1798!1.88e-21!1;DOID:3095!8.25e-09!22;DOID:2994!8.25e-09!22 | |ontology_enrichment_disease=DOID:1799!1.88e-21!1;DOID:10165!1.88e-21!1;DOID:1798!1.88e-21!1;DOID:3095!8.25e-09!22;DOID:2994!8.25e-09!22 | ||
|ontology_enrichment_disease_v019=DOID:1799;2.42e-50;1!DOID:10165;2.42e-50;1!DOID:1798;2.42e-50;1!DOID:1793;1.00e-13;4!DOID:3095;4.43e-10;22!DOID:2994;4.43e-10;22!DOID:170;1.32e-09;6 | |ontology_enrichment_disease_v019=DOID:1799;2.42e-50;1!DOID:10165;2.42e-50;1!DOID:1798;2.42e-50;1!DOID:1793;1.00e-13;4!DOID:3095;4.43e-10;22!DOID:2994;4.43e-10;22!DOID:170;1.32e-09;6 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,2.42e-50,1;DOID:10165,2.42e-50,1;DOID:1798,2.42e-50,1;DOID:1793,1.00e-13,4;DOID:3095,4.33e-10,22;DOID:2994,4.33e-10,22;DOID:170,1.32e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002110!5.54e-08!3;UBERON:0006242!5.54e-08!3 | |ontology_enrichment_uberon=UBERON:0002110!5.54e-08!3;UBERON:0006242!5.54e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;1.03e-17;3!UBERON:0002075;4.68e-12;18!UBERON:0002294;2.26e-08;7!UBERON:0001173;2.26e-08;7 | |ontology_enrichment_uberon_v019=UBERON:0002110;1.03e-17;3!UBERON:0002075;4.68e-12;18!UBERON:0002294;2.26e-08;7!UBERON:0001173;2.26e-08;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,1.12e-17,3;UBERON:0006242,1.12e-17,3;UBERON:0002075,4.81e-12,18;UBERON:0002294,8.85e-07,9;UBERON:0001173,8.85e-07,9;UBERON:0004912,8.85e-07,9 | |||
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|short_description=p10@COL21A1 | |short_description=p10@COL21A1 | ||
}} | }} |
Revision as of 03:46, 18 November 2012
Short description: | p10@COL21A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_COL21A1_5end |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | -65bp_to_ENST00000370819, uc003pcu.1_5end |
EntrezGene: | COL21A1 |
HGNC: | 17025 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.16e-29 | 7 |
germ cell | 3.16e-29 | 7 |
epithelial cell of gall bladder | 9.18e-26 | 2 |
epithelial cell of pancreas | 1.00e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 1.12e-17 | 3 |
gall bladder primordium | 1.12e-17 | 3 |
viscus | 4.81e-12 | 18 |
biliary system | 8.85e-07 | 9 |
biliary tree | 8.85e-07 | 9 |
biliary bud | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.42e-50 | 1 |
endocrine pancreas cancer | 2.42e-50 | 1 |
pancreatic endocrine carcinoma | 2.42e-50 | 1 |
pancreatic cancer | 1.00e-13 | 4 |
germ cell and embryonal cancer | 4.33e-10 | 22 |
germ cell cancer | 4.33e-10 | 22 |
endocrine gland cancer | 1.32e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.