FFCP PHASE1:Hg19::chr7:23245459..23245465,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0000239!8.36e-12!3;CL:1000615!8.36e-12!3;CL:0002306!8.36e-12!3;CL:1000507!2.73e-07!12;CL:1000494!2.73e-07!12 | |ontology_enrichment_celltype=CL:0000239!8.36e-12!3;CL:1000615!8.36e-12!3;CL:0002306!8.36e-12!3;CL:1000507!2.73e-07!12;CL:1000494!2.73e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002535;6.30e-26;2 | |ontology_enrichment_celltype_v019=CL:0002535;6.30e-26;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,7.14e-26,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;8.54e-21;10!UBERON:0007687;8.54e-21;10!UBERON:0003104;1.17e-07;31 | |ontology_enrichment_development_v019=UBERON:0003918;8.54e-21;10!UBERON:0007687;8.54e-21;10!UBERON:0003104;1.17e-07;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;3.10e-11;5 | |ontology_enrichment_disease_v019=DOID:4362;3.10e-11;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,3.26e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0006853!8.36e-12!3;UBERON:0007685!8.36e-12!3;UBERON:0004134!8.36e-12!3;UBERON:0003133!3.80e-11!48;UBERON:0005156!1.71e-08!59;UBERON:0000990!1.71e-08!59;UBERON:0003135!4.65e-08!11;UBERON:0000062!5.25e-08!511;UBERON:0004175!6.21e-08!25;UBERON:0000489!1.07e-07!32;UBERON:0002113!1.71e-07!27;UBERON:0003918!1.71e-07!27;UBERON:0005095!1.71e-07!27;UBERON:0007687!1.71e-07!27;UBERON:0003887!2.03e-07!21;UBERON:0009773!2.73e-07!12;UBERON:0001231!2.73e-07!12;UBERON:0004810!2.73e-07!12;UBERON:0007023!3.54e-07!115;UBERON:0006555!4.03e-07!17;UBERON:0005103!4.03e-07!17;UBERON:0000083!4.03e-07!17;UBERON:0009201!4.03e-07!17;UBERON:0004819!4.03e-07!17;UBERON:0006553!4.03e-07!17;UBERON:0003074!4.03e-07!17;UBERON:0003060!4.03e-07!17 | |ontology_enrichment_uberon=UBERON:0006853!8.36e-12!3;UBERON:0007685!8.36e-12!3;UBERON:0004134!8.36e-12!3;UBERON:0003133!3.80e-11!48;UBERON:0005156!1.71e-08!59;UBERON:0000990!1.71e-08!59;UBERON:0003135!4.65e-08!11;UBERON:0000062!5.25e-08!511;UBERON:0004175!6.21e-08!25;UBERON:0000489!1.07e-07!32;UBERON:0002113!1.71e-07!27;UBERON:0003918!1.71e-07!27;UBERON:0005095!1.71e-07!27;UBERON:0007687!1.71e-07!27;UBERON:0003887!2.03e-07!21;UBERON:0009773!2.73e-07!12;UBERON:0001231!2.73e-07!12;UBERON:0004810!2.73e-07!12;UBERON:0007023!3.54e-07!115;UBERON:0006555!4.03e-07!17;UBERON:0005103!4.03e-07!17;UBERON:0000083!4.03e-07!17;UBERON:0009201!4.03e-07!17;UBERON:0004819!4.03e-07!17;UBERON:0006553!4.03e-07!17;UBERON:0003074!4.03e-07!17;UBERON:0003060!4.03e-07!17 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;6.30e-26;2!UBERON:0004801;6.30e-26;2!UBERON:0000002;1.38e-09;6!UBERON:0001560;1.38e-09;6!UBERON:0002113;2.56e-09;24!UBERON:0011143;2.56e-09;24!UBERON:0000489;6.90e-08;29!UBERON:0006554;1.17e-07;30!UBERON:0001008;1.17e-07;30 | |ontology_enrichment_uberon_v019=UBERON:0006955;6.30e-26;2!UBERON:0004801;6.30e-26;2!UBERON:0000002;1.38e-09;6!UBERON:0001560;1.38e-09;6!UBERON:0002113;2.56e-09;24!UBERON:0011143;2.56e-09;24!UBERON:0000489;6.90e-08;29!UBERON:0006554;1.17e-07;30!UBERON:0001008;1.17e-07;30 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,7.14e-26,2;UBERON:0004801,7.14e-26,2;UBERON:0000002,1.44e-09,6;UBERON:0001560,1.44e-09,6;UBERON:0002113,1.11e-08,26;UBERON:0003918,1.11e-08,26;UBERON:0011143,1.11e-08,26;UBERON:0005095,1.11e-08,26;UBERON:0007687,1.11e-08,26;UBERON:0000489,1.92e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895661896959697,0,0.515151135268373,0,0,0.242584061187816,0,0,0,0,0,0,0,0,1.35426486594342,0.188242339542605,0.545812300115692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.698906672968121,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,1.18208560948797,1.36381929150995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0.227336094654718,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0.190941474834495,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895661896959697,0,0.515151135268373,0,0,0.242584061187816,0,0,0,0,0,0,0,0,1.35426486594342,0.188242339542605,0.545812300115692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.698906672968121,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,1.18208560948797,1.36381929150995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0.227336094654718,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0.190941474834495,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p5@ENST00000413042,p5@uc003svz.1 | |short_description=p5@ENST00000413042,p5@uc003svz.1 | ||
}} | }} |
Revision as of 11:55, 18 November 2012
Short description: | p5@ENST00000413042, p5@uc003svz.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ENST00000413042_5end, CAGE_peak_5_at_uc003svz.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -166bp_to_ENST00000413042, uc003svz.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 7.14e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 7.14e-26 | 2 |
cervix epithelium | 7.14e-26 | 2 |
uterine cervix | 1.44e-09 | 6 |
neck of organ | 1.44e-09 | 6 |
kidney | 1.11e-08 | 26 |
kidney mesenchyme | 1.11e-08 | 26 |
upper urinary tract | 1.11e-08 | 26 |
kidney rudiment | 1.11e-08 | 26 |
kidney field | 1.11e-08 | 26 |
cavitated compound organ | 1.92e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.26e-11 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.