FFCP PHASE1:Hg19::chr17:74610496..74610501,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000623!1.04e-09!3;CL:0000825!1.04e-09!3;CL:0002150!1.45e-09!3;CL:0000861!1.45e-09!3;CL:0002087!2.12e-09!119;CL:0000838!2.31e-09!52;CL:0000037!3.40e-09!172;CL:0000566!3.40e-09!172;CL:0000542!4.10e-09!53;CL:0000051!4.10e-09!53;CL:0000988!6.13e-09!182;CL:0000738!1.43e-08!140;CL:0002032!2.36e-08!165;CL:0000837!2.36e-08!165;CL:0002031!6.62e-08!124 | |ontology_enrichment_celltype=CL:0000623!1.04e-09!3;CL:0000825!1.04e-09!3;CL:0002150!1.45e-09!3;CL:0000861!1.45e-09!3;CL:0002087!2.12e-09!119;CL:0000838!2.31e-09!52;CL:0000037!3.40e-09!172;CL:0000566!3.40e-09!172;CL:0000542!4.10e-09!53;CL:0000051!4.10e-09!53;CL:0000988!6.13e-09!182;CL:0000738!1.43e-08!140;CL:0002032!2.36e-08!165;CL:0000837!2.36e-08!165;CL:0002031!6.62e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000623;8.98e-23;3!CL:0002127;3.16e-18;1!CL:0000911;3.16e-18;1!CL:0000814;3.16e-18;1 | |ontology_enrichment_celltype_v019=CL:0000623;8.98e-23;3!CL:0002127;3.16e-18;1!CL:0000911;3.16e-18;1!CL:0000814;3.16e-18;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,7.20e-23,3;CL:0000825,7.20e-23,3;CL:0002127,3.16e-18,1;CL:0000914,3.16e-18,1;CL:0000911,3.16e-18,1;CL:0000814,3.16e-18,1;CL:0002042,3.16e-18,1;CL:0002039,3.16e-18,1;CL:0002040,3.16e-18,1;CL:0002041,3.16e-18,1;CL:0000893,8.69e-10,2;CL:0002489,8.69e-10,2;CL:0000809,8.69e-10,2;CL:0000808,8.69e-10,2;CL:0000894,8.69e-10,2;CL:0000806,8.69e-10,2;CL:0000807,8.69e-10,2;CL:0000805,8.69e-10,2;CL:0002425,8.69e-10,2 | |||
|ontology_enrichment_development_v019=CL:0002425;8.69e-10;2!UBERON:0009117;1.42e-07;10!UBERON:0005564;1.42e-07;10 | |ontology_enrichment_development_v019=CL:0002425;8.69e-10;2!UBERON:0009117;1.42e-07;10!UBERON:0005564;1.42e-07;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;4.44e-18;1!DOID:3350;1.03e-09;2 | |ontology_enrichment_disease_v019=DOID:6193;4.44e-18;1!DOID:3350;1.03e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:6193,3.75e-18,1;DOID:3350,9.46e-10,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.01e-09;8!UBERON:0003135;5.81e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0000473;3.01e-09;8!UBERON:0003135;5.81e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.01e-09,8;UBERON:0003135,5.81e-07,11 | |||
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| ||
|short_description=p@chr17:74610496..74610501,- | |short_description=p@chr17:74610496..74610501,- | ||
}} | }} |
Revision as of 12:29, 19 November 2012
Short description: | p@chr17:74610496..74610501, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:74610496..74610501, - |
Coexpression cluster: | C3683_embryonic_NK_Natural_Hodgkin_CD8_mesothelioma_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 7.20e-23 | 3 |
pro-NK cell | 7.20e-23 | 3 |
innate effector T cell | 3.16e-18 | 1 |
immature NK T cell | 3.16e-18 | 1 |
effector T cell | 3.16e-18 | 1 |
mature NK T cell | 3.16e-18 | 1 |
immature NK T cell stage IV | 3.16e-18 | 1 |
immature NK T cell stage I | 3.16e-18 | 1 |
immature NK T cell stage II | 3.16e-18 | 1 |
immature NK T cell stage III | 3.16e-18 | 1 |
thymocyte | 8.69e-10 | 2 |
double negative thymocyte | 8.69e-10 | 2 |
double-positive, alpha-beta thymocyte | 8.69e-10 | 2 |
DN4 thymocyte | 8.69e-10 | 2 |
DN1 thymic pro-T cell | 8.69e-10 | 2 |
DN2 thymocyte | 8.69e-10 | 2 |
DN3 thymocyte | 8.69e-10 | 2 |
immature single positive thymocyte | 8.69e-10 | 2 |
early T lineage precursor | 8.69e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 3.01e-09 | 8 |
male reproductive organ | 5.81e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 3.75e-18 | 1 |
mesenchymal cell neoplasm | 9.46e-10 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.