FFCP PHASE1:Mm9::chr1:9538130..9538182,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr1:9538130..9538182,+ | |id=chr1:9538130..9538182,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!8.55e-12!47;UBERON:0002365!1.29e-09!25;UBERON:0002330!1.29e-09!25;UBERON:0005172!1.63e-09!49;UBERON:0005173!1.63e-09!49;UBERON:0002417!1.63e-09!49;UBERON:0000916!1.63e-09!49;UBERON:0004111!5.89e-09!122;UBERON:0002107!2.01e-08!22;UBERON:0007499!2.01e-08!22;UBERON:0006925!2.01e-08!22;UBERON:0009497!2.01e-08!22;UBERON:0000015!2.01e-08!22;UBERON:0002423!2.01e-08!22;UBERON:0006235!2.01e-08!22;UBERON:0008835!2.01e-08!22;UBERON:0003894!2.01e-08!22;UBERON:0004161!2.01e-08!22;UBERON:0008836!2.01e-08!22;UBERON:0000025!4.37e-08!114;UBERON:0005177!5.60e-08!85;UBERON:0005256!5.85e-08!47;UBERON:0009854!5.86e-08!23;UBERON:0009856!5.86e-08!23;UBERON:0002100!9.14e-08!98;UBERON:0000468!4.32e-07!333 | |ontology_enrichment_uberon=UBERON:0003914!8.55e-12!47;UBERON:0002365!1.29e-09!25;UBERON:0002330!1.29e-09!25;UBERON:0005172!1.63e-09!49;UBERON:0005173!1.63e-09!49;UBERON:0002417!1.63e-09!49;UBERON:0000916!1.63e-09!49;UBERON:0004111!5.89e-09!122;UBERON:0002107!2.01e-08!22;UBERON:0007499!2.01e-08!22;UBERON:0006925!2.01e-08!22;UBERON:0009497!2.01e-08!22;UBERON:0000015!2.01e-08!22;UBERON:0002423!2.01e-08!22;UBERON:0006235!2.01e-08!22;UBERON:0008835!2.01e-08!22;UBERON:0003894!2.01e-08!22;UBERON:0004161!2.01e-08!22;UBERON:0008836!2.01e-08!22;UBERON:0000025!4.37e-08!114;UBERON:0005177!5.60e-08!85;UBERON:0005256!5.85e-08!47;UBERON:0009854!5.86e-08!23;UBERON:0009856!5.86e-08!23;UBERON:0002100!9.14e-08!98;UBERON:0000468!4.32e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,7.45e-12,47;UBERON:0003104,7.77e-11,61;UBERON:0009142,7.77e-11,61;UBERON:0002365,1.16e-09,25;UBERON:0002330,1.16e-09,25;UBERON:0005172,1.47e-09,49;UBERON:0005173,1.47e-09,49;UBERON:0002417,1.47e-09,49;UBERON:0000916,1.47e-09,49;UBERON:0004111,9.69e-09,122;UBERON:0005256,1.08e-08,45;UBERON:0002107,1.84e-08,22;UBERON:0007499,1.84e-08,22;UBERON:0006925,1.84e-08,22;UBERON:0009497,1.84e-08,22;UBERON:0000015,1.84e-08,22;UBERON:0002423,1.84e-08,22;UBERON:0006235,1.84e-08,22;UBERON:0008835,1.84e-08,22;UBERON:0003894,1.84e-08,22;UBERON:0004161,1.84e-08,22;UBERON:0008836,1.84e-08,22;UBERON:0009854,5.37e-08,23;UBERON:0009856,5.37e-08,23;UBERON:0000025,7.09e-08,114;UBERON:0002100,2.02e-07,90;UBERON:0005177,3.07e-07,79 | |||
|phase1_expression=2.24208385946712,0,0,0.30246421130683,0,0.33575854382378,0,0,0,0,0,0,0,0,0.333109761815663,1.21485160433896,1.39912375625629,0,0.274228867211478,1.27316895539409,57.319177561821,0,0,0,0.45881856213434,1.14846392823004,0,0.215471232685889,0.570070258369122,0.756090389279792,0.221730510655305,0,1.23012957516914,0,0.866554859253824,0.997407872150954,0.612508068787107,4.18531630736908,3.1253413780952,6.28228492768558,3.52938892818609,3.41522742479223,6.311634589405,23.1650145075062,21.086401693659,9.72797786456912,5.47673941043627,22.0205407944251,18.6733255324301,23.9148775861369,15.6784792220406,17.2503077237966,0,0,0,5.40244815675489,18.6246735960192,11.3447860301037,1.41621522601718,4.7609188134483,2.53532561402472,3.38844532069132,2.66788438833342,0.449949858640699,0.988866362566974,0,3.59520132622086,6.53171119046643,0.311068836925433,0.135005938331691,0.210324961351382,17.7103610330358,27.3876990780001,3.30725157880376,2.87536413054709,3.67687514644008,22.0231761998777,17.2377906415003,13.9781945263182,2.2420668914133,2.8361169516747,3.12548022334056,14.7966989470732,18.5711661310454,24.142123148736,18.2669722993674,18.7930618654816,7.45597783301202,0.37863096666592,0.529000920747499,5.2175607966302,203.060034967607,129.87452473818,196.991664947803,230.670628193923,229.837793080933,139.320864770698,3.06774580640504,3.63700406444016,2.47337702157238,3.66192891419369,1.28326477414318,2.54805239706646,0,0,0.253359865475099,0,163.853867396851,3.88406825470758,55.8142442883741,2.25530924795977,15.2232739156071,14.5287763271317,21.7040602395776,23.1649753057338,74.3946220671679,20.2699873542187,491.49321417078,10.6153266233985,9.38247729694973,16.1214308476087,15.0311328471919,3.72783522436244,8.78342391034641,6.49284791121711,3.83185582812887,0.239630249011841,1.19980546198682,0.127070227073065,38.4961943270394,31.5675415944852,11.5602003943835,25.8998237086492,24.2929684463814,44.2588534911863,24.3361894601636,3.7680564624617,26.3742777693397,43.468314450592,119.530974143517,2.99277018814219,1.60931473103431,1.98068342785884,3.46621081022145,3.12967896096108,4.86832137082429,3.84177070694888,50.7058606648471,0.431135985865684,0.567318240503458,0.351902248327898,0.876782929710299,0.278047249225598,1.0447564995665,1.23469281844766,3.58261680273288,0,0.257347907114715,0.568326998791185,2.89976081549703,2.57978665979206,2.52086886045421,4.97163944728941,17.1184881620241,32.8588950450116,67.4348439776183,63.0442493289105,93.8793352632043,69.9379362132292,69.6070047695364,155.165701470768,182.60378429424,151.270029435534,157.826748462197,35.9595812044658,13.377599609307,1.65209391491899,1.58670339998127,0.853153002140936,1.39342003116263,1.28867461322093,6.45387278794696,3.7804267453628,4.37518940058886,2.37264530772256,1.97638745668813,4.27269854960458,4.77495532898762,2.9244613067868,4.49409704327111,2.16138049874694,2.98711909881551,1.70701110857774,8.11164439529075,34.9393980586549,33.3988177666315,51.0095041250856,59.0543603476482,131.658470292704,367.992098913148,315.096446777639,322.560186491587,247.241490990682,2.50267658574141,1.96558995113203,6.74586337154561,10.3458661908136,32.8000937263287,63.9110887971364,94.3643330838659,79.1219906662173,138.104390833605,152.394298918996,276.500724117698,282.082056495563,290.465709639178,304.616808160207,245.081308852591,17.736306255994,0.568474235311454,0.814824882210129,0.509235257325564,0.469380496577004,6.365237782789,14.9967493758189,9.75668239288994,5.2019597555043,4.65075848262427,6.69710028361446,18.1888279334469,13.9874835311375,17.7918342055259,0,3.80733978673097,69.3387624956841,69.8119968150973,33.7156238974363,25.3177243039159,0.491804836130026,98.2111906825011,2.83957397474631,1.56175497718655,4.52389135238878,3.58453196928828,3.34198011123591,2.26461224631066,4.85772842009873,3.79932615284705,3.95287777946523,26.66966926301,38.7496432618573,3.38324646967785,1.14020871547503,23.2607873391275,46.460798418987,2.18502572539483,4.23252979750651,43.5677734236125,30.4160949667196,29.2063390546731,12.4045580720746,17.8131527443978,26.3808060004694,47.0894769324366,29.5172104009997,34.0347292719017,5.10659408630682,1.08036656418786,0.388076051348264,1.07168517515796,2.12808280370728,1.60531935841864,2.63278432963394,2.74018454203139,2.3467170806371,10.8034356140548,73.4359565523023,22.0947578941583,19.3757312035087,26.0551835689633,16.2346387844266,9.84845398470368,3.20628920292836,33.1911290598812,2.22132145037209,3.09580301944834,3.1483069652851,2.82552685507037,2.05041341581538,3.20289442489132,0,0.139951452323658,0.138199973804424,62.0535901709824,1.26534397432454,3.65975040828328,1.94409613479242,2.09088296014469,2.83871332870031,6.87808166562586,24.2174625275234,34.2900283999079,8.81381818384192,33.552322906694,11.837551712368,8.52244312450679,6.28742263736971,5.25018208528929,4.77891346867605,8.10989402355735,12.0877955805127,9.37471570876441,6.08184197669123,4.34851417486811,18.4339204005034,18.9606672376907,0.810900861160657,1.33524244314275,5.3267537420896,3.93858730468459,5.96044064343795,5.16840432935866,3.98761723371358,7.06765149637033,4.19137436602499,6.35204966362095,4.58052039476836,2.69393156592922,6.19447581562315,43.7589640377358,0,0.269141569828427,0.839423081820392,21.6372345316053,10.1348536743638,10.6227942075014,4.07299920250225,50.1572104035363,23.7195773899168,22.5559365888517,28.0718801585304,15.6386395932756,17.8121455140367,23.4172108190807,19.5756525067224,19.8141329418657,22.203978040226,16.0505696643064,0.207574695168353,0.798049746802062,2.04880326904961,7.05009479498053,6.07878171621149,21.5096904886517,45.5605791993311,39.1466608753899,48.1378814387723,37.9045817645696,44.6123567806822,35.4617521805823,37.0820369580734,38.4150914429216,37.8499740417491,30.0065025508336,34.1858761537324,33.9520228016121,42.8569336835439,36.7997300335993,38.7442255195519,39.3996289673729,33.1426304026776,37.9354147410377,35.291017655749,36.7227398249876,35.8538826830634,42.0911538300549,39.2473889014541,47.13595081925,34.9973303466314,29.551344712669,24.5538625901814,37.1848418846318,29.7076180910958,8.24374907195222,45.3827320384092,38.2470476205971,55.2823279678957,44.3388752430226,71.6471612067102 | |phase1_expression=2.24208385946712,0,0,0.30246421130683,0,0.33575854382378,0,0,0,0,0,0,0,0,0.333109761815663,1.21485160433896,1.39912375625629,0,0.274228867211478,1.27316895539409,57.319177561821,0,0,0,0.45881856213434,1.14846392823004,0,0.215471232685889,0.570070258369122,0.756090389279792,0.221730510655305,0,1.23012957516914,0,0.866554859253824,0.997407872150954,0.612508068787107,4.18531630736908,3.1253413780952,6.28228492768558,3.52938892818609,3.41522742479223,6.311634589405,23.1650145075062,21.086401693659,9.72797786456912,5.47673941043627,22.0205407944251,18.6733255324301,23.9148775861369,15.6784792220406,17.2503077237966,0,0,0,5.40244815675489,18.6246735960192,11.3447860301037,1.41621522601718,4.7609188134483,2.53532561402472,3.38844532069132,2.66788438833342,0.449949858640699,0.988866362566974,0,3.59520132622086,6.53171119046643,0.311068836925433,0.135005938331691,0.210324961351382,17.7103610330358,27.3876990780001,3.30725157880376,2.87536413054709,3.67687514644008,22.0231761998777,17.2377906415003,13.9781945263182,2.2420668914133,2.8361169516747,3.12548022334056,14.7966989470732,18.5711661310454,24.142123148736,18.2669722993674,18.7930618654816,7.45597783301202,0.37863096666592,0.529000920747499,5.2175607966302,203.060034967607,129.87452473818,196.991664947803,230.670628193923,229.837793080933,139.320864770698,3.06774580640504,3.63700406444016,2.47337702157238,3.66192891419369,1.28326477414318,2.54805239706646,0,0,0.253359865475099,0,163.853867396851,3.88406825470758,55.8142442883741,2.25530924795977,15.2232739156071,14.5287763271317,21.7040602395776,23.1649753057338,74.3946220671679,20.2699873542187,491.49321417078,10.6153266233985,9.38247729694973,16.1214308476087,15.0311328471919,3.72783522436244,8.78342391034641,6.49284791121711,3.83185582812887,0.239630249011841,1.19980546198682,0.127070227073065,38.4961943270394,31.5675415944852,11.5602003943835,25.8998237086492,24.2929684463814,44.2588534911863,24.3361894601636,3.7680564624617,26.3742777693397,43.468314450592,119.530974143517,2.99277018814219,1.60931473103431,1.98068342785884,3.46621081022145,3.12967896096108,4.86832137082429,3.84177070694888,50.7058606648471,0.431135985865684,0.567318240503458,0.351902248327898,0.876782929710299,0.278047249225598,1.0447564995665,1.23469281844766,3.58261680273288,0,0.257347907114715,0.568326998791185,2.89976081549703,2.57978665979206,2.52086886045421,4.97163944728941,17.1184881620241,32.8588950450116,67.4348439776183,63.0442493289105,93.8793352632043,69.9379362132292,69.6070047695364,155.165701470768,182.60378429424,151.270029435534,157.826748462197,35.9595812044658,13.377599609307,1.65209391491899,1.58670339998127,0.853153002140936,1.39342003116263,1.28867461322093,6.45387278794696,3.7804267453628,4.37518940058886,2.37264530772256,1.97638745668813,4.27269854960458,4.77495532898762,2.9244613067868,4.49409704327111,2.16138049874694,2.98711909881551,1.70701110857774,8.11164439529075,34.9393980586549,33.3988177666315,51.0095041250856,59.0543603476482,131.658470292704,367.992098913148,315.096446777639,322.560186491587,247.241490990682,2.50267658574141,1.96558995113203,6.74586337154561,10.3458661908136,32.8000937263287,63.9110887971364,94.3643330838659,79.1219906662173,138.104390833605,152.394298918996,276.500724117698,282.082056495563,290.465709639178,304.616808160207,245.081308852591,17.736306255994,0.568474235311454,0.814824882210129,0.509235257325564,0.469380496577004,6.365237782789,14.9967493758189,9.75668239288994,5.2019597555043,4.65075848262427,6.69710028361446,18.1888279334469,13.9874835311375,17.7918342055259,0,3.80733978673097,69.3387624956841,69.8119968150973,33.7156238974363,25.3177243039159,0.491804836130026,98.2111906825011,2.83957397474631,1.56175497718655,4.52389135238878,3.58453196928828,3.34198011123591,2.26461224631066,4.85772842009873,3.79932615284705,3.95287777946523,26.66966926301,38.7496432618573,3.38324646967785,1.14020871547503,23.2607873391275,46.460798418987,2.18502572539483,4.23252979750651,43.5677734236125,30.4160949667196,29.2063390546731,12.4045580720746,17.8131527443978,26.3808060004694,47.0894769324366,29.5172104009997,34.0347292719017,5.10659408630682,1.08036656418786,0.388076051348264,1.07168517515796,2.12808280370728,1.60531935841864,2.63278432963394,2.74018454203139,2.3467170806371,10.8034356140548,73.4359565523023,22.0947578941583,19.3757312035087,26.0551835689633,16.2346387844266,9.84845398470368,3.20628920292836,33.1911290598812,2.22132145037209,3.09580301944834,3.1483069652851,2.82552685507037,2.05041341581538,3.20289442489132,0,0.139951452323658,0.138199973804424,62.0535901709824,1.26534397432454,3.65975040828328,1.94409613479242,2.09088296014469,2.83871332870031,6.87808166562586,24.2174625275234,34.2900283999079,8.81381818384192,33.552322906694,11.837551712368,8.52244312450679,6.28742263736971,5.25018208528929,4.77891346867605,8.10989402355735,12.0877955805127,9.37471570876441,6.08184197669123,4.34851417486811,18.4339204005034,18.9606672376907,0.810900861160657,1.33524244314275,5.3267537420896,3.93858730468459,5.96044064343795,5.16840432935866,3.98761723371358,7.06765149637033,4.19137436602499,6.35204966362095,4.58052039476836,2.69393156592922,6.19447581562315,43.7589640377358,0,0.269141569828427,0.839423081820392,21.6372345316053,10.1348536743638,10.6227942075014,4.07299920250225,50.1572104035363,23.7195773899168,22.5559365888517,28.0718801585304,15.6386395932756,17.8121455140367,23.4172108190807,19.5756525067224,19.8141329418657,22.203978040226,16.0505696643064,0.207574695168353,0.798049746802062,2.04880326904961,7.05009479498053,6.07878171621149,21.5096904886517,45.5605791993311,39.1466608753899,48.1378814387723,37.9045817645696,44.6123567806822,35.4617521805823,37.0820369580734,38.4150914429216,37.8499740417491,30.0065025508336,34.1858761537324,33.9520228016121,42.8569336835439,36.7997300335993,38.7442255195519,39.3996289673729,33.1426304026776,37.9354147410377,35.291017655749,36.7227398249876,35.8538826830634,42.0911538300549,39.2473889014541,47.13595081925,34.9973303466314,29.551344712669,24.5538625901814,37.1848418846318,29.7076180910958,8.24374907195222,45.3827320384092,38.2470476205971,55.2823279678957,44.3388752430226,71.6471612067102 | ||
|short_description=p1@Adhfe1 | |short_description=p1@Adhfe1 | ||
}} | }} |
Revision as of 22:32, 13 November 2012
Short description: | p1@Adhfe1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Adhfe1_5end |
Coexpression cluster: | MCL_coexpression_mm9:511 |
Association with transcript: | 0bp_to_ENSMUST00000027044, ENSMUST00000130927_5end |
EntrezGene: | Adhfe1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 7.45e-12 | 47 |
mesenchyme | 7.77e-11 | 61 |
entire embryonic mesenchyme | 7.77e-11 | 61 |
exocrine gland | 1.16e-09 | 25 |
exocrine system | 1.16e-09 | 25 |
abdomen element | 1.47e-09 | 49 |
abdominal segment element | 1.47e-09 | 49 |
abdominal segment of trunk | 1.47e-09 | 49 |
abdomen | 1.47e-09 | 49 |
anatomical conduit | 9.69e-09 | 122 |
trunk mesenchyme | 1.08e-08 | 45 |
liver | 1.84e-08 | 22 |
epithelial sac | 1.84e-08 | 22 |
digestive gland | 1.84e-08 | 22 |
epithelium of foregut-midgut junction | 1.84e-08 | 22 |
anatomical boundary | 1.84e-08 | 22 |
hepatobiliary system | 1.84e-08 | 22 |
foregut-midgut junction | 1.84e-08 | 22 |
hepatic diverticulum | 1.84e-08 | 22 |
liver primordium | 1.84e-08 | 22 |
septum transversum | 1.84e-08 | 22 |
liver bud | 1.84e-08 | 22 |
digestive tract diverticulum | 5.37e-08 | 23 |
sac | 5.37e-08 | 23 |
tube | 7.09e-08 | 114 |
trunk | 2.02e-07 | 90 |
trunk region element | 3.07e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.