Personal tools

FFCP PHASE1:Mm9::chr3:96405007..96405062,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr3:96405007..96405062,+
|id=chr3:96405007..96405062,+
|ontology_enrichment_celltype=CL:0000055!3.78e-19!50;CL:0002319!6.10e-16!43;CL:0000221!1.51e-15!44;CL:0000133!1.51e-15!44;CL:0000393!1.54e-14!39;CL:0000211!1.54e-14!39;CL:0000540!4.46e-11!33;CL:0000047!4.46e-11!33;CL:0000031!4.46e-11!33;CL:0000404!4.46e-11!33;CL:0002321!3.03e-08!70;CL:0000220!3.03e-08!70
|ontology_enrichment_celltype=CL:0000055!3.78e-19!50;CL:0002319!6.10e-16!43;CL:0000221!1.51e-15!44;CL:0000133!1.51e-15!44;CL:0000393!1.54e-14!39;CL:0000211!1.54e-14!39;CL:0000540!4.46e-11!33;CL:0000047!4.46e-11!33;CL:0000031!4.46e-11!33;CL:0000404!4.46e-11!33;CL:0002321!3.03e-08!70;CL:0000220!3.03e-08!70
|ontology_enrichment_celltype_v019_2=CL:0002319,5.99e-16,43;CL:0000221,1.49e-15,44;CL:0000133,1.49e-15,44;CL:0000393,1.51e-14,39;CL:0000211,1.51e-14,39;CL:0000540,4.41e-11,33;CL:0000047,4.41e-11,33;CL:0000031,4.41e-11,33;CL:0000404,4.41e-11,33;CL:0002321,2.60e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.53e-09!75;UBERON:0001016!2.53e-09!75;UBERON:0004121!2.82e-09!102;UBERON:0000924!2.82e-09!102;UBERON:0006601!2.82e-09!102;UBERON:0001017!2.94e-09!73;UBERON:0005743!2.94e-09!73
|ontology_enrichment_uberon=UBERON:0000073!2.53e-09!75;UBERON:0001016!2.53e-09!75;UBERON:0004121!2.82e-09!102;UBERON:0000924!2.82e-09!102;UBERON:0006601!2.82e-09!102;UBERON:0001017!2.94e-09!73;UBERON:0005743!2.94e-09!73
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.02e-09,92;UBERON:0001016,2.51e-09,75;UBERON:0001017,2.91e-09,73;UBERON:0004121,1.02e-08,95;UBERON:0000924,1.02e-08,95;UBERON:0006601,1.02e-08,95
|phase1_expression=96.7299036512956,2.44282785347553,0.909998478779072,0,0,0,0.233612640595526,2.7115897922731,0,0,0,0.0797721589953364,0,0.0874204024189974,2.33176833270964,3.03712901084739,0,1.73504190947031,1.37114433605739,2.12194825899015,22.4514285998824,2.28369187762036,1.56719873483361,0.319984845586813,0.45881856213434,0.57423196411502,0.86152399231815,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,5.71527606113668,5.53558308826113,0,0,0,0,0,1.5626706890476,0.523523743973798,0.588231488031014,0,1.45653105909346,120.231461166676,117.293109420978,99.4823396716314,395.10762889576,83.7216600500915,179.044238928595,158.654797644615,121.788186814065,163.877923376068,1.00669563634642,1.45072428402269,0.336093799142464,90.2980620486174,98.2809698989936,104.681434732321,80.1173185004007,77.7616739529888,89.3702278943713,107.413716665915,124.50127145556,61.6431306337758,56.3653826663175,64.6536904600951,157.290058022162,142.160772968975,105.037577268488,96.5292459071588,115.67872874326,89.9800600871981,81.2796230701938,94.3179153955146,95.4620891341634,68.0221902091416,23.1243350098716,22.6006588410782,21.6585211891303,73.9882074166387,60.5648200647952,69.2814782840491,25.1264699101243,26.449842671489,27.1980881042722,77.7819465650483,61.7893094668107,73.0685827635178,24.686739026618,54.260380156672,51.8857434776003,24.0918685554788,3.39985666853875,3.2382191498269,5.19821133958135,7.16843019355737,14.8871085339657,77.7162270955943,79.4945174084778,80.2080834138472,26.4785629180159,102.661181931454,168.171458206386,199.098676882933,0.432982082022428,1.52015919285059,0.505524445014783,9.1347103775248,12.4290184150642,50.6187694211052,44.0652729985985,40.7983740938269,34.8229400856648,35.1183752487611,45.7420070757892,43.1036408260787,21.5059621928905,39.9094225098956,16.8076004870476,53.7065941825398,22.9675179198809,23.7588874036259,20.5030937339934,27.2286141220739,27.8564120061895,12.0064815948038,2.99537811264801,2.39961092397363,1.77898317902291,22.6183865501282,21.0450277296568,54.7852975212089,20.3374454624963,18.6672283851141,26.3890816590641,18.9822277789276,73.3243419722277,29.484452034592,13.6470289554184,17.8875577503503,48.0144434532377,62.7632745103381,59.0603785761545,51.6917525176503,57.3547687845694,58.2917427296067,50.2241243640146,28.9747775227698,41.8201906289714,52.0041720461503,54.5448484908241,55.8949117690316,65.0630563187899,62.68538997399,54.1207018752891,64.4871024491918,0.702213187313235,0.51469581422943,1.42081749697796,44.3249153225974,47.6087901761625,45.3756394881757,52.5573312999167,53.3231068035464,48.7484076724115,53.9478751820946,51.5084930687269,45.3049528384618,54.798430021189,44.817717693593,45.1553269170416,44.1523962024504,41.2754216747175,42.1408154907567,27.9685631590289,76.0465085482912,1.32167513193519,7.1401652999157,49.269585873639,49.4664111062734,40.3355153938152,28.840744021138,29.131523743678,23.0173007596197,16.6085171540579,18.1168850196412,33.9302531880364,22.6810378126912,24.9554031512474,21.5716658077013,13.6166971421057,13.7407478545513,50.2619937525666,29.47611625331,34.9393980586549,34.0097717501675,32.9719228184964,34.787366665598,24.6622494784603,13.5801336141234,11.1469096767376,11.9695249004147,8.00422093135302,13.5144535630036,15.9212786041694,6.2961391467759,6.6943840058206,11.0941493486112,9.16653066413111,12.6586300478357,14.9164408633033,8.23684239564244,107.826154895516,23.4448797031157,17.4741096944154,8.5876818502018,6.99649912735457,10.1313139486307,42.3084805481525,53.0575952957357,55.4080919902888,48.2076043601534,41.3054836987764,40.3690080434776,44.9902481274566,40.3926651065644,69.2018282626178,78.3985001356663,70.3195529779518,40.638102049503,43.8619853939375,40.3570873442417,37.6978209848181,14.1415477792864,15.2446924635901,14.6246475541508,24.0825884981688,22.1530087659264,97.7052274444986,32.0638077549554,78.8770548540642,77.3068713707344,103.834077707209,97.2603007666887,91.3474563737816,108.418311292123,90.6775971751763,85.3387105101031,79.0575555893047,35.6666661228206,59.3309556170563,101.141262883001,82.5836883922631,81.8251809943776,9.2921596837974,27.9197731578229,24.4882081141448,16.9744571780308,25.6912646806272,25.2096821314021,25.3259727304857,18.5402202033528,26.7373033788541,12.009396801561,8.4334886859999,6.18813259489121,34.0439605753788,38.3530130286691,39.0663225023919,33.4365774649284,31.0345408873979,49.9432689285798,41.9600002535408,27.4018454203139,17.835049812842,11.4389318266463,34.1819016985191,33.4719093471204,48.1163991553799,31.1817821878566,30.3205753767967,15.9216672752709,18.9462543809403,25.0324157714188,7.68918963590337,60.4713523132242,30.3719024886327,7.34636982318295,7.10809984149331,6.63456702298916,3.73952545986482,2.93898049879682,3.04039942369732,29.5947891584685,45.8687190692646,37.4107819513402,41.6900615572153,28.6450965539822,34.9380101993884,34.1206796353596,40.4175398496893,21.9874991266585,17.1091764745167,10.5627683224777,18.0381740378941,50.2375594707769,55.924969774499,62.0299290817512,63.5466331510437,61.8379419296248,52.6934001519435,39.5821329925608,34.1841462827817,22.7089073576446,23.0424005006292,7.2682557744481,23.3133997583689,19.1042380326579,12.7322406518239,12.5318686967237,12.715606706001,7.69250876927801,7.82754494025259,5.95702054694071,5.86792411243499,4.63800451629466,4.48306251402861,4.32953287381483,4.67507608726276,17.2315091547561,7.10355050797007,6.9976808155391,8.05846158547577,68.7754954754598,48.7974436173073,50.3666966734979,27.2247841430414,22.069172577556,27.6728402882363,23.9369122983732,32.0821487526062,25.0905646221784,21.2375581128899,18.8848474347425,16.8755625057951,18.463169332193,22.6571204492102,22.7814537170801,53.0353346155143,56.6615320229464,53.439618601044,45.2178493747027,50.9359985185997,59.1976097209046,44.8938390159263,42.2371867339733,57.7654577265267,45.2328009057197,45.6262739802432,47.1565853465191,43.5433009734953,46.4182354935302,41.7555859307308,45.247900671892,42.8772005995965,40.8967547383055,41.2085900803307,41.6572943980344,39.0870947719374,39.0446773550542,40.2957161010972,42.0051144067429,42.6315493281448,40.8688556116797,41.1587938963738,36.0405504669845,44.4079452275968,38.718816744384,40.9290812528401,40.6823512211077,32.3292524104055,37.4947155670038,48.8053725782288,76.6918474269494,40.9380314779465,56.2962161606542,74.4111611747801,47.8683379489349,40.3450033979533
|phase1_expression=96.7299036512956,2.44282785347553,0.909998478779072,0,0,0,0.233612640595526,2.7115897922731,0,0,0,0.0797721589953364,0,0.0874204024189974,2.33176833270964,3.03712901084739,0,1.73504190947031,1.37114433605739,2.12194825899015,22.4514285998824,2.28369187762036,1.56719873483361,0.319984845586813,0.45881856213434,0.57423196411502,0.86152399231815,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,5.71527606113668,5.53558308826113,0,0,0,0,0,1.5626706890476,0.523523743973798,0.588231488031014,0,1.45653105909346,120.231461166676,117.293109420978,99.4823396716314,395.10762889576,83.7216600500915,179.044238928595,158.654797644615,121.788186814065,163.877923376068,1.00669563634642,1.45072428402269,0.336093799142464,90.2980620486174,98.2809698989936,104.681434732321,80.1173185004007,77.7616739529888,89.3702278943713,107.413716665915,124.50127145556,61.6431306337758,56.3653826663175,64.6536904600951,157.290058022162,142.160772968975,105.037577268488,96.5292459071588,115.67872874326,89.9800600871981,81.2796230701938,94.3179153955146,95.4620891341634,68.0221902091416,23.1243350098716,22.6006588410782,21.6585211891303,73.9882074166387,60.5648200647952,69.2814782840491,25.1264699101243,26.449842671489,27.1980881042722,77.7819465650483,61.7893094668107,73.0685827635178,24.686739026618,54.260380156672,51.8857434776003,24.0918685554788,3.39985666853875,3.2382191498269,5.19821133958135,7.16843019355737,14.8871085339657,77.7162270955943,79.4945174084778,80.2080834138472,26.4785629180159,102.661181931454,168.171458206386,199.098676882933,0.432982082022428,1.52015919285059,0.505524445014783,9.1347103775248,12.4290184150642,50.6187694211052,44.0652729985985,40.7983740938269,34.8229400856648,35.1183752487611,45.7420070757892,43.1036408260787,21.5059621928905,39.9094225098956,16.8076004870476,53.7065941825398,22.9675179198809,23.7588874036259,20.5030937339934,27.2286141220739,27.8564120061895,12.0064815948038,2.99537811264801,2.39961092397363,1.77898317902291,22.6183865501282,21.0450277296568,54.7852975212089,20.3374454624963,18.6672283851141,26.3890816590641,18.9822277789276,73.3243419722277,29.484452034592,13.6470289554184,17.8875577503503,48.0144434532377,62.7632745103381,59.0603785761545,51.6917525176503,57.3547687845694,58.2917427296067,50.2241243640146,28.9747775227698,41.8201906289714,52.0041720461503,54.5448484908241,55.8949117690316,65.0630563187899,62.68538997399,54.1207018752891,64.4871024491918,0.702213187313235,0.51469581422943,1.42081749697796,44.3249153225974,47.6087901761625,45.3756394881757,52.5573312999167,53.3231068035464,48.7484076724115,53.9478751820946,51.5084930687269,45.3049528384618,54.798430021189,44.817717693593,45.1553269170416,44.1523962024504,41.2754216747175,42.1408154907567,27.9685631590289,76.0465085482912,1.32167513193519,7.1401652999157,49.269585873639,49.4664111062734,40.3355153938152,28.840744021138,29.131523743678,23.0173007596197,16.6085171540579,18.1168850196412,33.9302531880364,22.6810378126912,24.9554031512474,21.5716658077013,13.6166971421057,13.7407478545513,50.2619937525666,29.47611625331,34.9393980586549,34.0097717501675,32.9719228184964,34.787366665598,24.6622494784603,13.5801336141234,11.1469096767376,11.9695249004147,8.00422093135302,13.5144535630036,15.9212786041694,6.2961391467759,6.6943840058206,11.0941493486112,9.16653066413111,12.6586300478357,14.9164408633033,8.23684239564244,107.826154895516,23.4448797031157,17.4741096944154,8.5876818502018,6.99649912735457,10.1313139486307,42.3084805481525,53.0575952957357,55.4080919902888,48.2076043601534,41.3054836987764,40.3690080434776,44.9902481274566,40.3926651065644,69.2018282626178,78.3985001356663,70.3195529779518,40.638102049503,43.8619853939375,40.3570873442417,37.6978209848181,14.1415477792864,15.2446924635901,14.6246475541508,24.0825884981688,22.1530087659264,97.7052274444986,32.0638077549554,78.8770548540642,77.3068713707344,103.834077707209,97.2603007666887,91.3474563737816,108.418311292123,90.6775971751763,85.3387105101031,79.0575555893047,35.6666661228206,59.3309556170563,101.141262883001,82.5836883922631,81.8251809943776,9.2921596837974,27.9197731578229,24.4882081141448,16.9744571780308,25.6912646806272,25.2096821314021,25.3259727304857,18.5402202033528,26.7373033788541,12.009396801561,8.4334886859999,6.18813259489121,34.0439605753788,38.3530130286691,39.0663225023919,33.4365774649284,31.0345408873979,49.9432689285798,41.9600002535408,27.4018454203139,17.835049812842,11.4389318266463,34.1819016985191,33.4719093471204,48.1163991553799,31.1817821878566,30.3205753767967,15.9216672752709,18.9462543809403,25.0324157714188,7.68918963590337,60.4713523132242,30.3719024886327,7.34636982318295,7.10809984149331,6.63456702298916,3.73952545986482,2.93898049879682,3.04039942369732,29.5947891584685,45.8687190692646,37.4107819513402,41.6900615572153,28.6450965539822,34.9380101993884,34.1206796353596,40.4175398496893,21.9874991266585,17.1091764745167,10.5627683224777,18.0381740378941,50.2375594707769,55.924969774499,62.0299290817512,63.5466331510437,61.8379419296248,52.6934001519435,39.5821329925608,34.1841462827817,22.7089073576446,23.0424005006292,7.2682557744481,23.3133997583689,19.1042380326579,12.7322406518239,12.5318686967237,12.715606706001,7.69250876927801,7.82754494025259,5.95702054694071,5.86792411243499,4.63800451629466,4.48306251402861,4.32953287381483,4.67507608726276,17.2315091547561,7.10355050797007,6.9976808155391,8.05846158547577,68.7754954754598,48.7974436173073,50.3666966734979,27.2247841430414,22.069172577556,27.6728402882363,23.9369122983732,32.0821487526062,25.0905646221784,21.2375581128899,18.8848474347425,16.8755625057951,18.463169332193,22.6571204492102,22.7814537170801,53.0353346155143,56.6615320229464,53.439618601044,45.2178493747027,50.9359985185997,59.1976097209046,44.8938390159263,42.2371867339733,57.7654577265267,45.2328009057197,45.6262739802432,47.1565853465191,43.5433009734953,46.4182354935302,41.7555859307308,45.247900671892,42.8772005995965,40.8967547383055,41.2085900803307,41.6572943980344,39.0870947719374,39.0446773550542,40.2957161010972,42.0051144067429,42.6315493281448,40.8688556116797,41.1587938963738,36.0405504669845,44.4079452275968,38.718816744384,40.9290812528401,40.6823512211077,32.3292524104055,37.4947155670038,48.8053725782288,76.6918474269494,40.9380314779465,56.2962161606542,74.4111611747801,47.8683379489349,40.3450033979533
|short_description=p1@Lix1l
|short_description=p1@Lix1l
}}
}}

Revision as of 00:43, 14 November 2012

Short description:p1@Lix1l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lix1l_5end
Coexpression cluster:MCL_coexpression_mm9:1231
Association with transcript: 0bp_to_ENSMUST00000062058, NM_001163170, uc008qnh.1_5end
EntrezGene:Lix1l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lix1l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G796.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A322.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8120.23
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9117.29
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B399.48
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7395.11
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C283.72
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8179.04
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3158.65
Mouse Astrocytes, donor2.CNhs12078.11552-120C4121.79
Mouse Astrocytes, donor3.CNhs12107.11633-122C4163.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C190.30
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E198.28
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5104.68
Mouse Granule cells, donor1.CNhs12131.11713-123C380.12
Mouse Granule cells, donor2.CNhs12357.11731-123E377.76
Mouse Granule cells, donor3.CNhs12108.11636-122C789.37
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6107.41
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1124.50
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C761.64
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E756.37
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D264.65
Mouse Microglia, donor1.CNhs12629.11718-123C8157.29
Mouse Microglia, donor2.CNhs12634.11736-123E8142.16
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5105.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F596.53
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9115.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F189.98
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D581.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D294.32
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F295.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D668.02
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F322.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.66
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D473.99
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F460.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D869.28
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.13
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E526.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I627.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D677.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F661.79
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E173.07
Mouse Schwann, donor1.CNhs12507.11728-123D924.69
Mouse Schwann, donor2.CNhs12573.11746-123F954.26
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G351.89
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.09
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.17
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A714.89
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I777.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E379.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I880.21
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G626.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1102.66
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8168.17
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6199.10
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.13
accessory axillary lymph node, adult.CNhs10475.1063-29H912.43
adrenal gland, adult.CNhs10508.49-24D750.62
adrenal gland, embryo E14.CNhs11038.406-44C544.07
adrenal gland, embryo E16.CNhs11004.1254-43D640.80
adrenal gland, embryo E17.CNhs11043.1263-45I134.82
adrenal gland, embryo E18.CNhs11026.1262-18F535.12
adrenal gland, neonate N00.CNhs11191.1311-23C145.74
adrenal gland, neonate N25.CNhs11223.1377-27I343.10
amnion, adult pregnant day17.5.CNhs10488.583-22A821.51
aorta, adult.CNhs10498.46-23H139.91
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F553.71
bone (os femoris), neonate N16.CNhs11225.1525-43A622.97
bone (os femoris), neonate N20.CNhs11195.1350-25C323.76
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B227.23
cerebellum, neonate N30.CNhs11135.1395-42I227.86
colon, adult.CNhs10468.36-18H712.01
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A422.62
corpus striatum, adult.CNhs10487.19-21D821.05
corpus striatum, neonate N00.CNhs11226.630-43F154.79
cortex, adult.CNhs10473.12-14D520.34
cortex, neonate N30.CNhs11107.1392-42F218.67
diencephalon, adult.CNhs10482.20-12F226.39
diencephalon, neonate N30.CNhs11201.1388-42B218.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B173.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A229.48
epididymis, adult.CNhs10490.58-23B213.65
eyeball, adult.CNhs10484.31-12G417.89
eyeball, embryo E12.CNhs11016.345-16C648.01
eyeball, embryo E14.CNhs10521.399-16E262.76
eyeball, embryo E15.CNhs10593.426-16C959.06
eyeball, embryo E17.CNhs11023.1261-18D451.69
eyeball, neonate N00.CNhs11207.633-15C657.35
eyeball, neonate N01.CNhs11140.1532-43E758.29
eyeball, neonate N02.CNhs11205.1551-44G850.22
eyeball, neonate N16.CNhs11188.777-19A228.97
forelimb, embryo E11.CNhs10596.335-25E241.82
forelimb, embryo E12.CNhs10600.359-14H252.00
forelimb, embryo E13.CNhs10589.384-1E254.54
forelimb, embryo E14.CNhs10577.413-26A855.89
forelimb, embryo E15.CNhs11007.437-20E765.06
forelimb, embryo E17.CNhs10598.1517-43C462.69
forelimb, embryo E18.CNhs11008.1520-43B554.12
gonad, embryo E13.CNhs11044.1564-45I664.49
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E944.32
heart, embryo E12.CNhs11015.353-12F547.61
heart, embryo E13.CNhs11013.376-3I945.38
heart, embryo E14.CNhs10597.403-26D452.56
heart, embryo E15.CNhs11017.431-16C853.32
heart, embryo E16.CNhs11021.457-17C648.75
heart, embryo E17.CNhs11025.479-18E553.95
heart, embryo E18.CNhs11030.1283-20G351.51
heart, neonate N00.CNhs11213.639-21E345.30
heart, neonate N03.CNhs11221.1349-25I254.80
heart, neonate N10.CNhs11118.749-24G144.82
heart, neonate N16.CNhs11209.782-15G145.16
heart, neonate N20.CNhs11127.821-26I644.15
heart, neonate N25.CNhs11196.1351-25D341.28
heart, neonate N30.CNhs11202.1390-42D242.14
hippocampus, adult.CNhs10478.13-16E827.97
hippocampus, neonate N00.CNhs11228.627-43G176.05
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A37.14
intestine, embryo E12.CNhs11019.1251-16I549.27
intestine, embryo E13.CNhs11010.381-16D549.47
intestine, embryo E15.CNhs10602.976-16D840.34
intestine, embryo E16.CNhs10585.463-22H428.84
intestine, embryo E17.CNhs10582.482-18D329.13
intestine, embryo E18.CNhs10526.1289-20F723.02
intestine, neonate N00.CNhs11126.644-26D116.61
intestine, neonate N01.CNhs11192.1322-23E918.12
intestine, neonate N06.CNhs11102.688-20B833.93
intestine, neonate N07.CNhs11095.720-20F222.68
intestine, neonate N10.CNhs11098.755-23A524.96
intestine, neonate N20.CNhs11187.827-18D121.57
intestine, neonate N25.CNhs11121.1352-25E313.62
intestine, neonate N30.CNhs11131.1384-42G113.74
kidney, embryo E14.CNhs10606.411-4I950.26
kidney, embryo E15.CNhs10997.434-16F829.48
kidney, embryo E16.CNhs10584.464-22A534.94
kidney, embryo E17.CNhs11028.483-18I234.01
kidney, embryo E18.CNhs11001.1288-20C732.97
kidney, neonate N00.CNhs11214.646-21G734.79
kidney, neonate N10.CNhs11206.758-6D524.66
kidney, neonate N20.CNhs11113.832-19I113.58
kidney, neonate N25.CNhs11122.1353-25F311.15
kidney, neonate N30.CNhs11203.1385-42H111.97
liver, adult pregnant day01.CNhs10466.508-5B28.00
liver, embryo E12.CNhs10601.355-15F813.51
liver, embryo E13.CNhs10524.378-3H615.92
liver, embryo E14.CNhs10594.409-16E16.30
liver, embryo E15.CNhs10520.433-16D76.69
liver, embryo E16.CNhs10523.462-17F511.09
liver, embryo E17.CNhs10510.481-18A39.17
liver, embryo E18.CNhs10579.499-43G412.66
liver, neonate N00.CNhs11117.641-24F414.92
liver, neonate N03.CNhs11123.1345-25G28.24
liver, neonate N06.CNhs11101.684-20A8107.83
liver, neonate N07.CNhs11103.716-20H223.44
liver, neonate N10.CNhs11115.751-24B917.47
liver, neonate N20.CNhs11220.823-25A38.59
liver, neonate N25.CNhs11198.1368-26H17.00
liver, neonate N30.CNhs11106.1382-42D110.13
lung, adult.CNhs10474.28-22B142.31
lung, embryo E12.CNhs10522.354-16G253.06
lung, embryo E14.CNhs10604.404-26F855.41
lung, embryo E15.CNhs11020.432-17C548.21
lung, embryo E16.CNhs10998.458-17B641.31
lung, embryo E17.CNhs10605.480-44A640.37
lung, embryo E18.CNhs10583.1287-20I644.99
lung, neonate N00.CNhs11224.640-42C640.39
lung, neonate N06.CNhs11212.683-20E569.20
lung, neonate N07.CNhs11111.715-19A378.40
lung, neonate N10.CNhs11219.750-23E670.32
lung, neonate N20.CNhs11109.822-18A440.64
lung, neonate N25.CNhs11119.1359-25C743.86
lung, neonate N30.CNhs11133.1394-42H240.36
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A137.70
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.14
mammary gland, adult lactating day02.CNhs10480.595-22B615.24
mammary gland, adult pregnant day19.CNhs10476.588-5H214.62
medulla oblongata, adult.CNhs10477.17-12C224.08
medulla oblongata, neonate N30.CNhs11200.1396-42A322.15
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C797.71
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C232.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E178.88
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E277.31
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3103.83
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D797.26
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D891.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9108.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D490.68
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D585.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D679.06
olfactory brain, adult.CNhs10489.18-22I935.67
ovary, adult.CNhs10507.91-2I759.33
ovary, embryo E18.CNhs11040.505-44H7101.14
ovary, neonate N00.CNhs11217.1299-22I482.58
oviduct, adult pregnant day01.CNhs10500.988-6G681.83
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F427.92
pancreas, embryo E15.CNhs11042.1556-45F224.49
pancreas, embryo E16.CNhs11003.460-26E516.97
pancreas, embryo E17.CNhs10599.1558-45G325.69
pancreas, embryo E18.CNhs10580.1535-43I725.21
pancreas, neonate N00.CNhs11105.645-26G925.33
pancreas, neonate N01.CNhs11138.1531-43D718.54
pancreas, neonate N02.CNhs11139.1539-43D826.74
pancreas, neonate N16.CNhs11136.787-43B612.01
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G834.04
pituitary gland, embryo E12.CNhs11018.346-16E638.35
pituitary gland, embryo E13.CNhs11009.370-44C739.07
pituitary gland, embryo E14.CNhs11037.398-44A533.44
pituitary gland, embryo E15.CNhs10592.427-16B931.03
pituitary gland, embryo E16.CNhs11036.449-43F649.94
pituitary gland, embryo E17.CNhs11039.1265-44F541.96
pituitary gland, neonate N00.CNhs11190.1308-22E927.40
placenta, adult pregnant day10.CNhs10472.539-13I717.84
placenta, adult pregnant day17.CNhs10464.577-18G311.44
prostate, adult.CNhs10470.859-1F834.18
skin, adult.CNhs10492.30-1C333.47
skin, neonate N00.CNhs11124.650-25G448.12
skin, neonate N03.CNhs11215.662-22H331.18
skin, neonate N06.CNhs11097.693-20I530.32
skin, neonate N10.CNhs11108.762-6C415.92
small intestine, neonate N16.CNhs11114.790-21I118.95
spinal cord, adult.CNhs10505.24-13C925.03
spleen, adult.CNhs10465.25-2G27.69
spleen, embryo E16.CNhs11035.461-43C160.47
spleen, embryo E18.CNhs11011.1271-21F230.37
spleen, neonate N10.CNhs11116.752-24D17.35
spleen, neonate N20.CNhs11112.824-19H17.11
spleen, neonate N25.CNhs11099.1354-25G36.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H629.59
stomach, embryo E12.CNhs10588.356-43E345.87
stomach, embryo E15.CNhs10603.1252-16G837.41
stomach, embryo E16.CNhs11022.459-17D441.69
stomach, embryo E17.CNhs11006.1035-18D528.65
stomach, embryo E18.CNhs10999.1286-20C634.94
stomach, neonate N03.CNhs11193.1340-24B834.12
stomach, neonate N07.CNhs11210.718-18A940.42
stomach, neonate N25.CNhs11104.1355-25E421.99
stomach, neonate N30.CNhs11134.1386-42I117.11
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G518.04
testis, embryo E13.CNhs11031.389-23F550.24
testis, embryo E15.CNhs11034.443-27C555.92
testis, embryo E16.CNhs11033.470-26G562.03
testis, embryo E17.CNhs11029.486-18I563.55
testis, embryo E18.CNhs11027.503-18G561.84
testis, neonate N00.CNhs11189.1300-22B752.69
testis, neonate N07.CNhs11222.726-26I439.58
testis, neonate N10.CNhs11204.763-44D934.18
testis, neonate N20.CNhs11110.839-18H322.71
testis, neonate N30.CNhs11130.1391-42E223.04
thymus, adult.CNhs10471.38-12B57.27
thymus, embryo E14.CNhs11041.402-44I423.31
thymus, embryo E15.CNhs11005.430-45I219.10
thymus, embryo E16.CNhs11002.456-26C512.73
thymus, embryo E17.CNhs10581.478-18C112.53
thymus, embryo E18.CNhs10595.1273-19G412.72
thymus, neonate N02.CNhs11181.1541-43F87.69
thymus, neonate N03.CNhs11137.2104-43C77.83
thymus, neonate N06.CNhs11197.681-26C45.96
thymus, neonate N07.CNhs11211.713-19D35.87
thymus, neonate N10.CNhs11194.748-24E44.64
thymus, neonate N20.CNhs11186.820-7A24.48
thymus, neonate N25.CNhs11125.1362-25G74.33
thymus, neonate N30.CNhs11132.1393-42G24.68
tongue, adult.CNhs10499.32-1B417.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.06
urinary bladder, adult.CNhs10481.879-12E468.78
uterus, adult pregnant day19.CNhs10497.590-15F548.80
uterus, adult.CNhs10509.92-27E550.37
vagina, adult.CNhs10502.89-27D527.22
vesicular gland, adult.CNhs10491.51-27F822.07
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A127.67
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.94
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A332.08
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.24
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A822.66
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A922.78
whole body, embryo E11.CNhs11014.324-5I853.04
whole body, embryo E12.CNhs10587.857-27C956.66
whole body, embryo E13.CNhs10512.372-23H253.44
whole body, embryo E14.5.CNhs10578.420-27D245.22
whole body, embryo E14.CNhs10519.395-14B150.94
whole body, embryo E16.CNhs10514.453-14F259.20
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G544.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G542.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G557.77
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G545.23
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G545.63
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G547.16
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G543.54
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G546.42
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G541.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G545.25
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G542.88
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G540.90
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G541.21
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G541.66
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G539.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G539.04
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G540.30
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G542.01
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G542.63
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G540.87
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G541.16
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G536.04
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G544.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G538.72
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G540.93
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G540.68
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G532.33
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G537.49
whole body, embryo E17.5.CNhs10513.490-9F948.81
whole body, embryo E17.CNhs10517.475-3I576.69
whole body, embryo E18.CNhs10516.493-3B340.94
whole body, neonate N00.CNhs10525.657-19C256.30
whole body, neonate N01.CNhs10576.659-23C674.41
whole body, neonate N06.CNhs10515.692-21D147.87
whole body, neonate N10.CNhs10518.761-6B440.35





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell5.99e-1643
ectodermal cell1.49e-1544
neurectodermal cell1.49e-1544
electrically responsive cell1.51e-1439
electrically active cell1.51e-1439
neuron4.41e-1133
neuronal stem cell4.41e-1133
neuroblast4.41e-1133
electrically signaling cell4.41e-1133
embryonic cell2.60e-0870







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:96405007..96405062,%2B&oldid=2287873"