FFCP PHASE1:Mm9::chr6:136608017..136608028,+: Difference between revisions
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|id=chr6:136608017..136608028,+ | |id=chr6:136608017..136608028,+ | ||
|ontology_enrichment_celltype=CL:0000553!9.80e-12!6;CL:0000556!9.80e-12!6;CL:0000414!1.03e-08!11;CL:0000050!1.04e-07!9 | |ontology_enrichment_celltype=CL:0000553!9.80e-12!6;CL:0000556!9.80e-12!6;CL:0000414!1.03e-08!11;CL:0000050!1.04e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.53e-12,1;CL:0000236,5.53e-12,1;CL:0000826,5.53e-12,1;CL:0000355,1.41e-11,9 | |||
|ontology_enrichment_disease=DOID:0060100!6.21e-10!3;DOID:4045!6.21e-10!3 | |ontology_enrichment_disease=DOID:0060100!6.21e-10!3;DOID:4045!6.21e-10!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.61e-33,3;DOID:4045,3.61e-33,3;DOID:0050686,5.29e-17,6 | |||
|ontology_enrichment_uberon=UBERON:0002465!2.29e-09!3;UBERON:0002193!1.99e-08!48;UBERON:0002106!1.51e-07!6;UBERON:0004457!1.51e-07!6;UBERON:0000042!1.51e-07!6;UBERON:0004854!1.51e-07!6;UBERON:0009034!1.51e-07!6;UBERON:0002095!1.51e-07!6;UBERON:0004782!1.51e-07!6;UBERON:0003281!1.51e-07!6;UBERON:0009664!1.51e-07!6;UBERON:0002296!1.51e-07!6;UBERON:0005602!1.51e-07!6;UBERON:0001179!1.51e-07!6;UBERON:0006293!1.51e-07!6 | |ontology_enrichment_uberon=UBERON:0002465!2.29e-09!3;UBERON:0002193!1.99e-08!48;UBERON:0002106!1.51e-07!6;UBERON:0004457!1.51e-07!6;UBERON:0000042!1.51e-07!6;UBERON:0004854!1.51e-07!6;UBERON:0009034!1.51e-07!6;UBERON:0002095!1.51e-07!6;UBERON:0004782!1.51e-07!6;UBERON:0003281!1.51e-07!6;UBERON:0009664!1.51e-07!6;UBERON:0002296!1.51e-07!6;UBERON:0005602!1.51e-07!6;UBERON:0001179!1.51e-07!6;UBERON:0006293!1.51e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,7.11e-12,1;UBERON:0001097,7.11e-12,1;UBERON:0003968,7.11e-12,1;UBERON:0001467,7.11e-12,1;UBERON:0001134,1.41e-11,9;UBERON:0002036,1.41e-11,9;UBERON:0002385,1.41e-11,9;UBERON:0000486,1.41e-11,9;UBERON:0007503,1.41e-11,9;UBERON:0001015,1.41e-11,9;UBERON:0002329,1.41e-11,9;UBERON:0003082,1.41e-11,9;UBERON:0003059,1.41e-11,9;UBERON:0007282,1.41e-11,9;UBERON:0004290,1.41e-11,9;UBERON:0009618,1.41e-11,9;UBERON:0000383,1.74e-10,10;UBERON:0007524,1.36e-09,11;UBERON:0003077,1.36e-09,11;UBERON:0007285,1.36e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0.788655413395594,0.548457734422955,0.42438965179803,0,0,0,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,8.37063261473815,4.6880120671428,11.5175223674236,25.2939539853336,17.0761371239611,16.9928623560904,0,0,0,0,0,0,0,0,0,3.6912173332702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0,0,0.341741761595705,0,0.555583582109135,0,0.136694227721025,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0.788655413395594,0.548457734422955,0.42438965179803,0,0,0,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,8.37063261473815,4.6880120671428,11.5175223674236,25.2939539853336,17.0761371239611,16.9928623560904,0,0,0,0,0,0,0,0,0,3.6912173332702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0,0,0.341741761595705,0,0.555583582109135,0,0.136694227721025,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr6:136608017..136608028,+ | |short_description=p@chr6:136608017..136608028,+ | ||
}} | }} |
Revision as of 00:32, 15 November 2012
Short description: | p@chr6:136608017..136608028, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:136608017..136608028, + |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.53e-12 | 1 |
B cell | 5.53e-12 | 1 |
pro-B cell | 5.53e-12 | 1 |
multi-potent skeletal muscle stem cell | 1.41e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
lymph node | 7.11e-12 | 1 |
axillary lymph node | 7.11e-12 | 1 |
peripheral lymph node | 7.11e-12 | 1 |
shoulder | 7.11e-12 | 1 |
skeletal muscle tissue | 1.41e-11 | 9 |
striated muscle tissue | 1.41e-11 | 9 |
muscle tissue | 1.41e-11 | 9 |
multilaminar epithelium | 1.41e-11 | 9 |
epithelial vesicle | 1.41e-11 | 9 |
musculature | 1.41e-11 | 9 |
somite | 1.41e-11 | 9 |
myotome | 1.41e-11 | 9 |
presomitic mesoderm | 1.41e-11 | 9 |
presumptive segmental plate | 1.41e-11 | 9 |
dermomyotome | 1.41e-11 | 9 |
trunk paraxial mesoderm | 1.41e-11 | 9 |
musculature of body | 1.74e-10 | 10 |
dense mesenchyme tissue | 1.36e-09 | 11 |
paraxial mesoderm | 1.36e-09 | 11 |
presumptive paraxial mesoderm | 1.36e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.61e-33 | 3 |
muscle cancer | 3.61e-33 | 3 |
organ system cancer | 5.29e-17 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.