FFCP PHASE1:Mm9::chr11:54787273..54787303,-: Difference between revisions
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|id=chr11:54787273..54787303,- | |id=chr11:54787273..54787303,- | ||
|ontology_enrichment_celltype=CL:0002563!3.22e-18!9;CL:0002251!3.22e-18!9;CL:0000066!1.45e-13!25;CL:0000239!1.71e-11!6;CL:0000677!1.71e-11!6;CL:0000212!1.71e-11!6;CL:0000584!1.71e-11!6;CL:0000063!2.18e-10!66;CL:0002076!2.32e-10!15;CL:0000075!8.60e-10!7;CL:0000223!1.53e-09!20;CL:0000473!2.32e-09!3;CL:0000627!2.32e-09!3;CL:0000682!2.32e-09!3;CL:0002250!2.12e-08!3 | |ontology_enrichment_celltype=CL:0002563!3.22e-18!9;CL:0002251!3.22e-18!9;CL:0000066!1.45e-13!25;CL:0000239!1.71e-11!6;CL:0000677!1.71e-11!6;CL:0000212!1.71e-11!6;CL:0000584!1.71e-11!6;CL:0000063!2.18e-10!66;CL:0002076!2.32e-10!15;CL:0000075!8.60e-10!7;CL:0000223!1.53e-09!20;CL:0000473!2.32e-09!3;CL:0000627!2.32e-09!3;CL:0000682!2.32e-09!3;CL:0002250!2.12e-08!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.18e-33,3;CL:0000066,6.66e-28,25;CL:0002563,1.15e-19,9;CL:0002251,1.15e-19,9;CL:0000239,5.29e-17,6;CL:0000677,5.29e-17,6;CL:0000584,5.29e-17,6;CL:0000473,8.94e-15,7;CL:0000075,1.11e-14,7;CL:0000223,6.58e-14,20;CL:0000213,1.20e-12,1;CL:0002078,1.20e-12,1;CL:0000115,1.20e-12,1;CL:0002262,1.20e-12,1;CL:1000398,1.20e-12,1;CL:0002076,5.34e-12,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.46e-19!15;UBERON:0003350!3.22e-18!9;UBERON:0004808!3.22e-18!9;UBERON:0001277!3.22e-18!9;UBERON:0004923!1.22e-15!24;UBERON:0001242!3.15e-15!13;UBERON:0000060!3.15e-15!13;UBERON:0001262!3.15e-15!13;UBERON:0004786!3.15e-15!13;UBERON:0000485!1.20e-14!11;UBERON:0002465!2.00e-08!3 | |ontology_enrichment_uberon=UBERON:0000344!2.46e-19!15;UBERON:0003350!3.22e-18!9;UBERON:0004808!3.22e-18!9;UBERON:0001277!3.22e-18!9;UBERON:0004923!1.22e-15!24;UBERON:0001242!3.15e-15!13;UBERON:0000060!3.15e-15!13;UBERON:0001262!3.15e-15!13;UBERON:0004786!3.15e-15!13;UBERON:0000485!1.20e-14!11;UBERON:0002465!2.00e-08!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.15e-19,9;UBERON:0004808,1.15e-19,9;UBERON:0001277,1.15e-19,9;UBERON:0000485,3.45e-16,11;UBERON:0001242,8.96e-14,13;UBERON:0001262,8.96e-14,13;UBERON:0004786,8.96e-14,13;UBERON:0002394,1.20e-12,1;UBERON:0001281,1.20e-12,1;UBERON:0000353,1.20e-12,1;UBERON:0003497,1.20e-12,1;UBERON:0003909,1.20e-12,1;UBERON:0003928,1.20e-12,1;UBERON:0003835,1.20e-12,1;UBERON:0003513,1.20e-12,1;UBERON:0001280,1.20e-12,1;UBERON:0004647,1.20e-12,1;UBERON:0002294,1.20e-12,1;UBERON:0001173,1.20e-12,1;UBERON:0004912,1.20e-12,1;UBERON:0005171,1.20e-12,1;UBERON:0000344,5.34e-12,15;UBERON:0004923,1.20e-07,24 | |||
|phase1_expression=0,0.697950815278722,1.36499771816861,0.30246421130683,0,1.34303417529512,2.10251376535973,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.22940928106717,1.14846392823004,2.15380998079537,2.58565479223067,0,0,0.221730510655305,0,0,0,1.1554064790051,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8121403446973,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0.206386867963223,0,0.188368457004691,0,0,0.509935289981566,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,1.36499771816861,0.30246421130683,0,1.34303417529512,2.10251376535973,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.22940928106717,1.14846392823004,2.15380998079537,2.58565479223067,0,0,0.221730510655305,0,0,0,1.1554064790051,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8121403446973,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0.206386867963223,0,0.188368457004691,0,0,0.509935289981566,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:54787273..54787303,- | |short_description=p@chr11:54787273..54787303,- | ||
}} | }} |
Revision as of 03:31, 15 November 2012
Short description: | p@chr11:54787273..54787303, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:54787273..54787303, - |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.18e-33 | 3 |
epithelial cell | 6.66e-28 | 25 |
intestinal epithelial cell | 1.15e-19 | 9 |
epithelial cell of alimentary canal | 1.15e-19 | 9 |
brush border epithelial cell | 5.29e-17 | 6 |
gut absorptive cell | 5.29e-17 | 6 |
enterocyte | 5.29e-17 | 6 |
defensive cell | 8.94e-15 | 7 |
columnar/cuboidal epithelial cell | 1.11e-14 | 7 |
endodermal cell | 6.58e-14 | 20 |
lining cell | 1.20e-12 | 1 |
meso-epithelial cell | 1.20e-12 | 1 |
endothelial cell | 1.20e-12 | 1 |
endothelial cell of sinusoid | 1.20e-12 | 1 |
endothelial cell of hepatic sinusoid | 1.20e-12 | 1 |
endo-epithelial cell | 5.34e-12 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.15e-19 | 9 |
gastrointestinal system epithelium | 1.15e-19 | 9 |
intestinal epithelium | 1.15e-19 | 9 |
simple columnar epithelium | 3.45e-16 | 11 |
intestinal mucosa | 8.96e-14 | 13 |
wall of intestine | 8.96e-14 | 13 |
gastrointestinal system mucosa | 8.96e-14 | 13 |
bile duct | 1.20e-12 | 1 |
hepatic sinusoid | 1.20e-12 | 1 |
parenchyma | 1.20e-12 | 1 |
abdomen blood vessel | 1.20e-12 | 1 |
sinusoid | 1.20e-12 | 1 |
digestive system duct | 1.20e-12 | 1 |
abdominal segment blood vessel | 1.20e-12 | 1 |
trunk blood vessel | 1.20e-12 | 1 |
liver parenchyma | 1.20e-12 | 1 |
liver lobule | 1.20e-12 | 1 |
biliary system | 1.20e-12 | 1 |
biliary tree | 1.20e-12 | 1 |
biliary bud | 1.20e-12 | 1 |
hepatic duct | 1.20e-12 | 1 |
mucosa | 5.34e-12 | 15 |
organ component layer | 1.20e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.