FFCP PHASE1:Mm9::chr4:88774121..88774141,-: Difference between revisions
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|id=chr4:88774121..88774141,- | |id=chr4:88774121..88774141,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.11e-19,3;CL:0002202,1.11e-19,3;CL:0000069,1.11e-19,3;CL:0002632,1.11e-19,3;CL:0002368,1.11e-19,3;CL:0000307,1.11e-19,3;CL:0000377,1.11e-19,3;CL:0000066,9.47e-09,25;CL:0000223,7.92e-08,20;CL:0000710,1.53e-07,1;CL:0002077,1.53e-07,1;CL:0005014,1.53e-07,1;CL:0002315,1.53e-07,1;CL:0002490,1.53e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.67e-08!22;UBERON:0007499!1.67e-08!22;UBERON:0006925!1.67e-08!22;UBERON:0009497!1.67e-08!22;UBERON:0000015!1.67e-08!22;UBERON:0002423!1.67e-08!22;UBERON:0006235!1.67e-08!22;UBERON:0008835!1.67e-08!22;UBERON:0003894!1.67e-08!22;UBERON:0004161!1.67e-08!22;UBERON:0008836!1.67e-08!22;UBERON:0009854!6.49e-08!23;UBERON:0009856!6.49e-08!23;UBERON:0003914!1.09e-07!47;UBERON:0002365!6.92e-07!25;UBERON:0002330!6.92e-07!25 | |ontology_enrichment_uberon=UBERON:0002107!1.67e-08!22;UBERON:0007499!1.67e-08!22;UBERON:0006925!1.67e-08!22;UBERON:0009497!1.67e-08!22;UBERON:0000015!1.67e-08!22;UBERON:0002423!1.67e-08!22;UBERON:0006235!1.67e-08!22;UBERON:0008835!1.67e-08!22;UBERON:0003894!1.67e-08!22;UBERON:0004161!1.67e-08!22;UBERON:0008836!1.67e-08!22;UBERON:0009854!6.49e-08!23;UBERON:0009856!6.49e-08!23;UBERON:0003914!1.09e-07!47;UBERON:0002365!6.92e-07!25;UBERON:0002330!6.92e-07!25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.11e-19,3;UBERON:0001005,1.11e-19,3;UBERON:0007196,1.11e-19,3;UBERON:0001558,1.11e-19,3;UBERON:0000162,6.72e-10,3;UBERON:0001353,6.72e-10,3;UBERON:0000163,6.72e-10,3;UBERON:0006866,6.72e-10,3;UBERON:0001046,6.72e-10,3;UBERON:0000164,6.72e-10,3;UBERON:0000931,6.72e-10,3;UBERON:0002107,6.86e-10,22;UBERON:0007499,6.86e-10,22;UBERON:0006925,6.86e-10,22;UBERON:0009497,6.86e-10,22;UBERON:0000015,6.86e-10,22;UBERON:0002423,6.86e-10,22;UBERON:0006235,6.86e-10,22;UBERON:0008835,6.86e-10,22;UBERON:0003894,6.86e-10,22;UBERON:0004161,6.86e-10,22;UBERON:0008836,6.86e-10,22;UBERON:0009854,1.91e-09,23;UBERON:0009856,1.91e-09,23;UBERON:0002365,1.15e-08,25;UBERON:0002330,1.15e-08,25;UBERON:0005256,2.91e-08,45;UBERON:0001255,4.65e-08,1;UBERON:0001556,4.65e-08,1;UBERON:0000996,5.41e-08,1;UBERON:0003104,1.86e-07,61;UBERON:0009142,1.86e-07,61;UBERON:0002100,2.74e-07,90;UBERON:0005177,7.07e-07,79;UBERON:0001041,9.56e-07,80;UBERON:0009569,9.68e-07,66 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.839918529752175,0,0,0,0,0.771778308107841,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0.860423876981386,0,1.61910957491345,1.29955283489534,0.896053774194671,0.702222100658759,0.511290967734173,0.519572009205738,1.41335829804136,1.54927761754349,0,0,0,1.5154372870785,1.77351905832569,3.0331466700887,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0.390361328888111,0,0,0.753524089178575,0.136072998302656,0.512454881139399,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,0.621377317606506,0.469052119962192,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0.16455984991348,0.32833492815819,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0,0,0.156998727841375,0.246794327843601,0,0.500535317148282,1.17935397067922,0,0.811440485554012,0.482354319504834,0.50925170356284,0.287696137450811,0,0.274561413188081,0,1.86070473834252,3.12037673114561,0.505157755894224,1.07638448113147,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0.163934945376675,0,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0.170870880797853,0,0.370389054739423,0,0,0,0.169978429993855,0,0,1.90934123603023,0.316335993581135,0.203319467126849,0.108005340821801,0.418176592028937,0.436725127492355,0,0.495920734352016,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0.167884616364078,8.50034213741638,0,0,3.85863082342319,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0.685738504770831,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0,0,0,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.839918529752175,0,0,0,0,0.771778308107841,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0.860423876981386,0,1.61910957491345,1.29955283489534,0.896053774194671,0.702222100658759,0.511290967734173,0.519572009205738,1.41335829804136,1.54927761754349,0,0,0,1.5154372870785,1.77351905832569,3.0331466700887,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0.390361328888111,0,0,0.753524089178575,0.136072998302656,0.512454881139399,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,0.621377317606506,0.469052119962192,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0.16455984991348,0.32833492815819,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0,0,0.156998727841375,0.246794327843601,0,0.500535317148282,1.17935397067922,0,0.811440485554012,0.482354319504834,0.50925170356284,0.287696137450811,0,0.274561413188081,0,1.86070473834252,3.12037673114561,0.505157755894224,1.07638448113147,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0.163934945376675,0,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0.170870880797853,0,0.370389054739423,0,0,0,0.169978429993855,0,0,1.90934123603023,0.316335993581135,0.203319467126849,0.108005340821801,0.418176592028937,0.436725127492355,0,0.495920734352016,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0.167884616364078,8.50034213741638,0,0,3.85863082342319,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0.685738504770831,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0,0,0,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p1@ENSMUST00000154352 | |short_description=p1@ENSMUST00000154352 | ||
}} | }} |
Revision as of 21:48, 14 November 2012
Short description: | p1@ENSMUST00000154352 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000154352_5end |
Coexpression cluster: | MCL_coexpression_mm9:1339 |
Association with transcript: | 0bp_to_ENSMUST00000154352_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.11e-19 | 3 |
epithelial cell of tracheobronchial tree | 1.11e-19 | 3 |
branched duct epithelial cell | 1.11e-19 | 3 |
epithelial cell of lower respiratory tract | 1.11e-19 | 3 |
respiratory epithelial cell | 1.11e-19 | 3 |
tracheal epithelial cell | 1.11e-19 | 3 |
tracheoblast | 1.11e-19 | 3 |
epithelial cell | 9.47e-09 | 25 |
endodermal cell | 7.92e-08 | 20 |
neurecto-epithelial cell | 1.53e-07 | 1 |
ecto-epithelial cell | 1.53e-07 | 1 |
auditory epithelial support cell | 1.53e-07 | 1 |
supporting cell of cochlea | 1.53e-07 | 1 |
organ of Corti supporting cell | 1.53e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.11e-19 | 3 |
respiratory airway | 1.11e-19 | 3 |
tracheobronchial tree | 1.11e-19 | 3 |
lower respiratory tract | 1.11e-19 | 3 |
cloaca | 6.72e-10 | 3 |
anal region | 6.72e-10 | 3 |
embryonic cloaca | 6.72e-10 | 3 |
terminal part of digestive tract | 6.72e-10 | 3 |
hindgut | 6.72e-10 | 3 |
primitive urogenital sinus | 6.72e-10 | 3 |
proctodeum | 6.72e-10 | 3 |
liver | 6.86e-10 | 22 |
epithelial sac | 6.86e-10 | 22 |
digestive gland | 6.86e-10 | 22 |
epithelium of foregut-midgut junction | 6.86e-10 | 22 |
anatomical boundary | 6.86e-10 | 22 |
hepatobiliary system | 6.86e-10 | 22 |
foregut-midgut junction | 6.86e-10 | 22 |
hepatic diverticulum | 6.86e-10 | 22 |
liver primordium | 6.86e-10 | 22 |
septum transversum | 6.86e-10 | 22 |
liver bud | 6.86e-10 | 22 |
digestive tract diverticulum | 1.91e-09 | 23 |
sac | 1.91e-09 | 23 |
exocrine gland | 1.15e-08 | 25 |
exocrine system | 1.15e-08 | 25 |
trunk mesenchyme | 2.91e-08 | 45 |
urinary bladder | 4.65e-08 | 1 |
lower urinary tract | 4.65e-08 | 1 |
vagina | 5.41e-08 | 1 |
mesenchyme | 1.86e-07 | 61 |
entire embryonic mesenchyme | 1.86e-07 | 61 |
trunk | 2.74e-07 | 90 |
trunk region element | 7.07e-07 | 79 |
foregut | 9.56e-07 | 80 |
subdivision of trunk | 9.68e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.