FFCP PHASE1:Mm9::chr19:40148221..40148260,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr19:40148221..40148260,- | |id=chr19:40148221..40148260,- | ||
|ontology_enrichment_celltype=CL:0000181!9.03e-20!5;CL:0000417!9.03e-20!5;CL:0000668!9.03e-20!5;CL:0000412!9.03e-20!5;CL:0000182!9.03e-20!5;CL:0000414!4.07e-09!11;CL:0000057!2.43e-07!1;CL:0000632!2.43e-07!1 | |ontology_enrichment_celltype=CL:0000181!9.03e-20!5;CL:0000417!9.03e-20!5;CL:0000668!9.03e-20!5;CL:0000412!9.03e-20!5;CL:0000182!9.03e-20!5;CL:0000414!4.07e-09!11;CL:0000057!2.43e-07!1;CL:0000632!2.43e-07!1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.73e-24,5;CL:0000057,1.05e-08,1;CL:0000632,1.05e-08,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.30e-44!22;UBERON:0007499!7.30e-44!22;UBERON:0006925!7.30e-44!22;UBERON:0009497!7.30e-44!22;UBERON:0000015!7.30e-44!22;UBERON:0002423!7.30e-44!22;UBERON:0006235!7.30e-44!22;UBERON:0008835!7.30e-44!22;UBERON:0003894!7.30e-44!22;UBERON:0004161!7.30e-44!22;UBERON:0008836!7.30e-44!22;UBERON:0009854!6.70e-42!23;UBERON:0009856!6.70e-42!23;UBERON:0002365!1.91e-38!25;UBERON:0002330!1.91e-38!25;UBERON:0003914!8.48e-20!47;UBERON:0005256!8.48e-20!47;UBERON:0005172!6.26e-19!49;UBERON:0005173!6.26e-19!49;UBERON:0002417!6.26e-19!49;UBERON:0000916!6.26e-19!49;UBERON:0005057!3.96e-18!51;UBERON:0003929!1.06e-16!55;UBERON:0002368!3.49e-15!60;UBERON:0002530!6.76e-14!65;UBERON:0000490!1.16e-13!66;UBERON:0009569!1.16e-13!66;UBERON:0005911!5.33e-13!69;UBERON:0002405!8.60e-13!70;UBERON:0000949!2.16e-12!72;UBERON:0000466!3.75e-11!79;UBERON:0005177!2.99e-10!85;UBERON:0001041!2.41e-09!92;UBERON:0000077!8.91e-09!97;UBERON:0002100!1.14e-08!98;UBERON:0000025!3.27e-07!114 | |ontology_enrichment_uberon=UBERON:0002107!7.30e-44!22;UBERON:0007499!7.30e-44!22;UBERON:0006925!7.30e-44!22;UBERON:0009497!7.30e-44!22;UBERON:0000015!7.30e-44!22;UBERON:0002423!7.30e-44!22;UBERON:0006235!7.30e-44!22;UBERON:0008835!7.30e-44!22;UBERON:0003894!7.30e-44!22;UBERON:0004161!7.30e-44!22;UBERON:0008836!7.30e-44!22;UBERON:0009854!6.70e-42!23;UBERON:0009856!6.70e-42!23;UBERON:0002365!1.91e-38!25;UBERON:0002330!1.91e-38!25;UBERON:0003914!8.48e-20!47;UBERON:0005256!8.48e-20!47;UBERON:0005172!6.26e-19!49;UBERON:0005173!6.26e-19!49;UBERON:0002417!6.26e-19!49;UBERON:0000916!6.26e-19!49;UBERON:0005057!3.96e-18!51;UBERON:0003929!1.06e-16!55;UBERON:0002368!3.49e-15!60;UBERON:0002530!6.76e-14!65;UBERON:0000490!1.16e-13!66;UBERON:0009569!1.16e-13!66;UBERON:0005911!5.33e-13!69;UBERON:0002405!8.60e-13!70;UBERON:0000949!2.16e-12!72;UBERON:0000466!3.75e-11!79;UBERON:0005177!2.99e-10!85;UBERON:0001041!2.41e-09!92;UBERON:0000077!8.91e-09!97;UBERON:0002100!1.14e-08!98;UBERON:0000025!3.27e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.14e-32,22;UBERON:0007499,1.14e-32,22;UBERON:0006925,1.14e-32,22;UBERON:0009497,1.14e-32,22;UBERON:0000015,1.14e-32,22;UBERON:0002423,1.14e-32,22;UBERON:0006235,1.14e-32,22;UBERON:0008835,1.14e-32,22;UBERON:0003894,1.14e-32,22;UBERON:0004161,1.14e-32,22;UBERON:0008836,1.14e-32,22;UBERON:0009854,3.19e-31,23;UBERON:0009856,3.19e-31,23;UBERON:0002365,1.13e-28,25;UBERON:0002330,1.13e-28,25;UBERON:0005256,1.34e-15,45;UBERON:0003914,6.68e-15,47;UBERON:0005172,2.93e-14,49;UBERON:0005173,2.93e-14,49;UBERON:0002417,2.93e-14,49;UBERON:0000916,2.93e-14,49;UBERON:0003929,1.30e-12,55;UBERON:0002368,1.73e-11,60;UBERON:0003104,2.77e-11,61;UBERON:0009142,2.77e-11,61;UBERON:0002530,1.56e-10,65;UBERON:0000490,2.32e-10,66;UBERON:0009569,2.32e-10,66;UBERON:0005911,7.17e-10,69;UBERON:0000949,2.02e-09,72;UBERON:0005177,1.68e-08,79;UBERON:0001041,2.21e-08,80;UBERON:0002100,2.43e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,2.03991400112325,2.15881276655127,18.1937396885347,9.85659151614138,2.10666630197628,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52195779591728,0,0,0,0,0,0,0,0.162135226775035,0.549122826376163,0,1.11642284300551,0.624075346229121,1.01031551178845,7.89348619496414,11.5786445127208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,2.03991400112325,2.15881276655127,18.1937396885347,9.85659151614138,2.10666630197628,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52195779591728,0,0,0,0,0,0,0,0.162135226775035,0.549122826376163,0,1.11642284300551,0.624075346229121,1.01031551178845,7.89348619496414,11.5786445127208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:40148221..40148260,- | |short_description=p@chr19:40148221..40148260,- | ||
}} | }} |
Revision as of 16:49, 13 November 2012
Short description: | p@chr19:40148221..40148260, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:40148221..40148260, - |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.73e-24 | 5 |
fibroblast | 1.05e-08 | 1 |
hepatic stellate cell | 1.05e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 1.14e-32 | 22 |
epithelial sac | 1.14e-32 | 22 |
digestive gland | 1.14e-32 | 22 |
epithelium of foregut-midgut junction | 1.14e-32 | 22 |
anatomical boundary | 1.14e-32 | 22 |
hepatobiliary system | 1.14e-32 | 22 |
foregut-midgut junction | 1.14e-32 | 22 |
hepatic diverticulum | 1.14e-32 | 22 |
liver primordium | 1.14e-32 | 22 |
septum transversum | 1.14e-32 | 22 |
liver bud | 1.14e-32 | 22 |
digestive tract diverticulum | 3.19e-31 | 23 |
sac | 3.19e-31 | 23 |
exocrine gland | 1.13e-28 | 25 |
exocrine system | 1.13e-28 | 25 |
trunk mesenchyme | 1.34e-15 | 45 |
epithelial tube | 6.68e-15 | 47 |
abdomen element | 2.93e-14 | 49 |
abdominal segment element | 2.93e-14 | 49 |
abdominal segment of trunk | 2.93e-14 | 49 |
abdomen | 2.93e-14 | 49 |
gut epithelium | 1.30e-12 | 55 |
endocrine gland | 1.73e-11 | 60 |
mesenchyme | 2.77e-11 | 61 |
entire embryonic mesenchyme | 2.77e-11 | 61 |
gland | 1.56e-10 | 65 |
unilaminar epithelium | 2.32e-10 | 66 |
subdivision of trunk | 2.32e-10 | 66 |
endo-epithelium | 7.17e-10 | 69 |
endocrine system | 2.02e-09 | 72 |
trunk region element | 1.68e-08 | 79 |
foregut | 2.21e-08 | 80 |
trunk | 2.43e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.