FFCP PHASE1:Mm9::chr6:113369311..113369346,-: Difference between revisions
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|id=chr6:113369311..113369346,- | |id=chr6:113369311..113369346,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.42e-08!22;UBERON:0007499!1.42e-08!22;UBERON:0006925!1.42e-08!22;UBERON:0009497!1.42e-08!22;UBERON:0000015!1.42e-08!22;UBERON:0002423!1.42e-08!22;UBERON:0006235!1.42e-08!22;UBERON:0008835!1.42e-08!22;UBERON:0003894!1.42e-08!22;UBERON:0004161!1.42e-08!22;UBERON:0008836!1.42e-08!22;UBERON:0000033!9.14e-08!63;UBERON:0009854!2.00e-07!23;UBERON:0009856!2.00e-07!23;UBERON:0000955!5.39e-07!50;UBERON:0006238!5.39e-07!50;UBERON:0002616!9.24e-07!49 | |ontology_enrichment_uberon=UBERON:0002107!1.42e-08!22;UBERON:0007499!1.42e-08!22;UBERON:0006925!1.42e-08!22;UBERON:0009497!1.42e-08!22;UBERON:0000015!1.42e-08!22;UBERON:0002423!1.42e-08!22;UBERON:0006235!1.42e-08!22;UBERON:0008835!1.42e-08!22;UBERON:0003894!1.42e-08!22;UBERON:0004161!1.42e-08!22;UBERON:0008836!1.42e-08!22;UBERON:0000033!9.14e-08!63;UBERON:0009854!2.00e-07!23;UBERON:0009856!2.00e-07!23;UBERON:0000955!5.39e-07!50;UBERON:0006238!5.39e-07!50;UBERON:0002616!9.24e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.42e-08,22;UBERON:0007499,1.42e-08,22;UBERON:0006925,1.42e-08,22;UBERON:0009497,1.42e-08,22;UBERON:0000015,1.42e-08,22;UBERON:0002423,1.42e-08,22;UBERON:0006235,1.42e-08,22;UBERON:0008835,1.42e-08,22;UBERON:0003894,1.42e-08,22;UBERON:0004161,1.42e-08,22;UBERON:0008836,1.42e-08,22;UBERON:0009854,1.99e-07,23;UBERON:0009856,1.99e-07,23;UBERON:0000073,7.88e-07,54 | |||
|phase1_expression=8.64803774365887,7.32848356042658,5.0049916332849,6.0492842261366,5.50985302940982,6.5472916045637,4.90586545250604,4.13194635013044,1.40788722151667,1.17032263160997,2.91070545983358,4.22792442675283,7.01922992717943,7.43073420561478,4.66353666541928,4.85940641735582,3.49780939064073,7.09789872056035,6.44437837946972,4.66828616977833,8.75945888556019,5.16312946244604,3.13439746966722,5.75972722056264,6.42345986988076,9.18771142584032,6.46142994238612,11.4199753323521,8.36103045608045,7.05684363327806,8.64748991555688,22.8611042445467,31.3683041668131,31.6963362030877,5.77703239502549,10.472782657585,9.80012910059372,2.51118978442145,3.1253413780952,0.523523743973798,1.17646297606203,1.36609096991689,0,3.77690453926732,3.95370031756107,4.40512205188036,14.0830441982647,13.2995345392072,9.44650585758229,11.665793944457,9.23910382727393,10.062679505548,5.20126078778983,1.45072428402269,3.6970317905671,2.57259436035947,5.73066879877513,5.15672092277442,10.1158230429799,6.87688273053643,10.775133859605,7.45457970552091,7.11435836888911,7.64914759689189,10.8775299882367,9.2362414942993,12.2836045312546,19.2109152660777,5.59923906465779,6.61529097825284,6.52007380189284,11.1403883917483,7.95126747425809,5.14461356702807,6.51749202924007,4.5960939330501,8.8092704799511,8.68273898979276,7.68032666281217,8.96826756565318,8.32537556781928,5.2091337055676,7.53794097303729,10.6924895906019,6.57032465440283,6.48182888042069,7.11858403995515,5.03278503728312,2.80186915332781,2.34271836331035,3.47837386442013,25.8127163094416,21.0791113449403,43.1762553310254,25.3412802804591,25.9855594516455,14.4657752735704,4.60161870960756,4.41636207824877,5.3000936176551,9.71819596459095,1.28326477414318,0,0,5.84525810730278,3.29367825117628,2.02209778005913,14.6155366040397,3.6251303710604,5.04703272820404,10.235634279202,5.48037860961854,7.84092690670599,6.0289056221049,5.17390311397101,7.6656620711102,9.39340877390621,8.24216334443496,5.30766331169925,4.85300549842228,5.74187947997023,3.39412677194655,0,13.7606974595427,13.4045892360611,6.89734049063197,2.15667224110656,5.99902730993408,2.79554499560742,9.43681028250383,9.60751265919116,7.79056983099759,10.9509321721134,8.18289463457058,8.72709787150152,8.92326946872667,5.29564692021645,5.97153458928446,11.1198013710817,7.15502310014011,8.19758790665033,10.1156925950728,5.40186389416048,6.48030716693575,6.46346741937615,8.71173297936978,9.27647073141315,13.9699820199068,11.2095356325078,7.37513712654495,6.51019159406611,8.54863356467542,3.33656699070717,3.1342694986995,3.08673204611915,6.76716507182877,4.91549231119264,3.86021860672073,4.54661599032948,4.97101854085205,4.69052119962192,5.76198596675248,3.55117103377815,4.72234156193769,6.63348585415727,7.20855228726264,5.90201483079162,4.90414437942112,6.25327429671226,5.91002870684743,5.91802309684747,8.33339928324394,8.12335426576887,4.96563749413376,15.5614561937454,6.27718135513635,3.96502539580558,6.08236303326152,6.82522401712749,5.57368012465052,6.57224052742676,5.44545516483025,10.0070119730192,7.98947629672748,8.54152310780121,15.152303834609,9.80207314321051,7.16243299348143,10.9179888786707,8.08937467788799,4.75503709724327,5.57595565112228,7.96605184002943,7.19765629441292,6.76246414038483,5.90588850751411,7.75809948670503,7.85521182771568,9.48548056863859,11.6612016903886,13.815888050041,21.7179008502369,30.5346205899763,7.17433954579204,8.64859578498093,6.97072548393047,6.08580364165509,9.64708639009667,10.4396599230382,12.6586300478357,11.6737363278025,18.9447375099776,7.18841032636773,12.6527922207291,16.5379966750717,22.4795201372929,32.2915344339442,30.3939418458921,3.8798169934987,11.1799932944586,7.00749398700711,6.11082308790677,5.63256595892405,4.18765643604539,5.47500374037832,5.65887578787617,5.04432461139811,3.10050565508285,6.37819074629948,3.60499292374624,4.83517949224508,7.08780387049407,0,3.26343410291226,4.91764273019036,3.31124095565679,8.66973185934077,7.2671245687166,2.13115428989678,11.8661335786055,4.41711507182759,2.34263246577983,3.66219776145758,4.77937595905104,3.34198011123591,4.52922449262132,6.47697122679831,3.79932615284705,3.95287777946523,8.9969968598106,3.97432238583152,8.72521457969551,4.88660878060728,4.94910368917606,11.9470624505967,8.25454162926937,10.2790009368015,5.65815239267694,4.72483028609236,9.22305443831782,9.30341855405596,5.08947221268508,4.63446591900138,6.32073515871632,7.37930260024991,9.28219889233682,3.40439605753788,9.00305470156551,11.6422815404479,7.28745919107414,6.20690817747958,5.52943334566419,7.40470592709544,9.13394847343798,9.62154003061212,6.99045833850607,3.74898276693435,3.79238381765404,5.32832608096488,5.12659861889325,5.61050016814741,5.74493149107714,6.12109756922687,8.52956389248344,5.12612642393558,4.74689796315412,4.62986318424279,5.08594833912666,3.14396723758358,5.26189798375002,3.90950388985867,4.05859211738608,3.04039942369732,6.68269432610579,8.69923982348122,6.30290348093231,5.40026704109006,6.48173717644853,4.36725127492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|phase1_expression=8.64803774365887,7.32848356042658,5.0049916332849,6.0492842261366,5.50985302940982,6.5472916045637,4.90586545250604,4.13194635013044,1.40788722151667,1.17032263160997,2.91070545983358,4.22792442675283,7.01922992717943,7.43073420561478,4.66353666541928,4.85940641735582,3.49780939064073,7.09789872056035,6.44437837946972,4.66828616977833,8.75945888556019,5.16312946244604,3.13439746966722,5.75972722056264,6.42345986988076,9.18771142584032,6.46142994238612,11.4199753323521,8.36103045608045,7.05684363327806,8.64748991555688,22.8611042445467,31.3683041668131,31.6963362030877,5.77703239502549,10.472782657585,9.80012910059372,2.51118978442145,3.1253413780952,0.523523743973798,1.17646297606203,1.36609096991689,0,3.77690453926732,3.95370031756107,4.40512205188036,14.0830441982647,13.2995345392072,9.44650585758229,11.665793944457,9.23910382727393,10.062679505548,5.20126078778983,1.45072428402269,3.6970317905671,2.57259436035947,5.73066879877513,5.15672092277442,10.1158230429799,6.87688273053643,10.775133859605,7.45457970552091,7.11435836888911,7.64914759689189,10.8775299882367,9.2362414942993,12.2836045312546,19.2109152660777,5.59923906465779,6.61529097825284,6.52007380189284,11.1403883917483,7.95126747425809,5.14461356702807,6.51749202924007,4.5960939330501,8.8092704799511,8.68273898979276,7.68032666281217,8.96826756565318,8.32537556781928,5.2091337055676,7.53794097303729,10.6924895906019,6.57032465440283,6.48182888042069,7.11858403995515,5.03278503728312,2.80186915332781,2.34271836331035,3.47837386442013,25.8127163094416,21.0791113449403,43.1762553310254,25.3412802804591,25.9855594516455,14.4657752735704,4.60161870960756,4.41636207824877,5.3000936176551,9.71819596459095,1.28326477414318,0,0,5.84525810730278,3.29367825117628,2.02209778005913,14.6155366040397,3.6251303710604,5.04703272820404,10.235634279202,5.48037860961854,7.84092690670599,6.0289056221049,5.17390311397101,7.6656620711102,9.39340877390621,8.24216334443496,5.30766331169925,4.85300549842228,5.74187947997023,3.39412677194655,0,13.7606974595427,13.4045892360611,6.89734049063197,2.15667224110656,5.99902730993408,2.79554499560742,9.43681028250383,9.60751265919116,7.79056983099759,10.9509321721134,8.18289463457058,8.72709787150152,8.92326946872667,5.29564692021645,5.97153458928446,11.1198013710817,7.15502310014011,8.19758790665033,10.1156925950728,5.40186389416048,6.48030716693575,6.46346741937615,8.71173297936978,9.27647073141315,13.9699820199068,11.2095356325078,7.37513712654495,6.51019159406611,8.54863356467542,3.33656699070717,3.1342694986995,3.08673204611915,6.76716507182877,4.91549231119264,3.86021860672073,4.54661599032948,4.97101854085205,4.69052119962192,5.76198596675248,3.55117103377815,4.72234156193769,6.63348585415727,7.20855228726264,5.90201483079162,4.90414437942112,6.25327429671226,5.91002870684743,5.91802309684747,8.33339928324394,8.12335426576887,4.96563749413376,15.5614561937454,6.27718135513635,3.96502539580558,6.08236303326152,6.82522401712749,5.57368012465052,6.57224052742676,5.44545516483025,10.0070119730192,7.98947629672748,8.54152310780121,15.152303834609,9.80207314321051,7.16243299348143,10.9179888786707,8.08937467788799,4.75503709724327,5.57595565112228,7.96605184002943,7.19765629441292,6.76246414038483,5.90588850751411,7.75809948670503,7.85521182771568,9.48548056863859,11.6612016903886,13.815888050041,21.7179008502369,30.5346205899763,7.17433954579204,8.64859578498093,6.97072548393047,6.08580364165509,9.64708639009667,10.4396599230382,12.6586300478357,11.6737363278025,18.9447375099776,7.18841032636773,12.6527922207291,16.5379966750717,22.4795201372929,32.2915344339442,30.3939418458921,3.8798169934987,11.1799932944586,7.00749398700711,6.11082308790677,5.63256595892405,4.18765643604539,5.47500374037832,5.65887578787617,5.04432461139811,3.10050565508285,6.37819074629948,3.60499292374624,4.83517949224508,7.08780387049407,0,3.26343410291226,4.91764273019036,3.31124095565679,8.66973185934077,7.2671245687166,2.13115428989678,11.8661335786055,4.41711507182759,2.34263246577983,3.66219776145758,4.77937595905104,3.34198011123591,4.52922449262132,6.47697122679831,3.79932615284705,3.95287777946523,8.9969968598106,3.97432238583152,8.72521457969551,4.88660878060728,4.94910368917606,11.9470624505967,8.25454162926937,10.2790009368015,5.65815239267694,4.72483028609236,9.22305443831782,9.30341855405596,5.08947221268508,4.63446591900138,6.32073515871632,7.37930260024991,9.28219889233682,3.40439605753788,9.00305470156551,11.6422815404479,7.28745919107414,6.20690817747958,5.52943334566419,7.40470592709544,9.13394847343798,9.62154003061212,6.99045833850607,3.74898276693435,3.79238381765404,5.32832608096488,5.12659861889325,5.61050016814741,5.74493149107714,6.12109756922687,8.52956389248344,5.12612642393558,4.74689796315412,4.62986318424279,5.08594833912666,3.14396723758358,5.26189798375002,3.90950388985867,4.05859211738608,3.04039942369732,6.68269432610579,8.69923982348122,6.30290348093231,5.40026704109006,6.48173717644853,4.36725127492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| ||
|short_description=p1@Rpusd3 | |short_description=p1@Rpusd3 | ||
}} | }} |
Revision as of 13:02, 13 November 2012
Short description: | p1@Rpusd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rpusd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000060634, ENSMUST00000113092, ENSMUST00000124078, ENSMUST00000129047, ENSMUST00000129560, ENSMUST00000150452, NM_001033204, uc009dfy.2, uc009dfz.2, uc009dga.1_5end |
EntrezGene: | Rpusd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.42e-08 | 22 |
epithelial sac | 1.42e-08 | 22 |
digestive gland | 1.42e-08 | 22 |
epithelium of foregut-midgut junction | 1.42e-08 | 22 |
anatomical boundary | 1.42e-08 | 22 |
hepatobiliary system | 1.42e-08 | 22 |
foregut-midgut junction | 1.42e-08 | 22 |
hepatic diverticulum | 1.42e-08 | 22 |
liver primordium | 1.42e-08 | 22 |
septum transversum | 1.42e-08 | 22 |
liver bud | 1.42e-08 | 22 |
digestive tract diverticulum | 1.99e-07 | 23 |
sac | 1.99e-07 | 23 |
regional part of nervous system | 7.88e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.