FFCP PHASE1:Mm9::chr9:121223244..121223258,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=26|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:121223244..121223258,-|id=chr9:121223244..121223258,-|ontology_enrichment_celltype=CL:0002563!1.69e-07!9;CL:0002251!1.69e-07!9;CL:0000144!3.18e-07!121;CL:0000012!3.18e-07!121|ontology_enrichment_celltype_v019_2=CL:0002563,1.05e-18,9;CL:0002251,1.05e-18,9;CL:0000239,4.54e-18,6;CL:0000677,4.54e-18,6;CL:0000584,4.54e-18,6;CL:0000075,1.54e-15,7;CL:0000066,7.63e-13,25;CL:0000223,5.09e-12,20;CL:0002076,3.07e-11,15;CL:0000213,1.56e-08,1;CL:0002078,1.56e-08,1;CL:0000115,1.56e-08,1;CL:0002262,1.56e-08,1;CL:1000398,1.56e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!1.69e-07!9;UBERON:0004808!1.69e-07!9;UBERON:0001277!1.69e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.05e-18,9;UBERON:0004808,1.05e-18,9;UBERON:0001277,1.05e-18,9;UBERON:0000485,2.56e-15,11;UBERON:0001242,5.75e-13,13;UBERON:0001262,5.75e-13,13;UBERON:0004786,5.75e-13,13;UBERON:0000344,3.07e-11,15;UBERON:0002394,1.56e-08,1;UBERON:0001281,1.56e-08,1;UBERON:0000353,1.56e-08,1;UBERON:0003497,1.56e-08,1;UBERON:0003909,1.56e-08,1;UBERON:0003928,1.56e-08,1;UBERON:0003835,1.56e-08,1;UBERON:0003513,1.56e-08,1;UBERON:0001280,1.56e-08,1;UBERON:0004647,1.56e-08,1;UBERON:0002294,1.56e-08,1;UBERON:0001173,1.56e-08,1;UBERON:0004912,1.56e-08,1;UBERON:0005171,1.56e-08,1;UBERON:0004923,5.26e-07,24|phase1_expression=0.160148847104794,1.04692622291808,0.454999239389536,1.20985684522732,2.50447864973174,1.00727563147134,0.467225281191051,0,0.422366166455,0.468129052643987,0.171217968225505,0,0.171200729931206,0,0,0,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0.0992909512008853,0,0,0,1.14846392823004,0.430761996159075,0.646413698057667,0,0.252030129759931,0.443461021310609,0,0,0,0.866554859253824,0.166234645358492,2.24586291888606,0.837063261473815,0,0,1.76469446409304,0.683045484958446,0,0.377690453926732,0.202753862439029,0,0.782391344348039,0,0.439372365468944,0,0.279972843250725,0,0.335565212115473,0,0,0.257259436035947,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0.270011876663381,0.210324961351382,0,0.441737081903227,0,0.0958454710182364,0.919218786610021,0,0,0.153606533256243,0,0.182975287204819,0,0,0,0.15279824777681,0,0.142371680799103,0,0.302904773332736,0.151143120213571,9.85539261585705,0.860423876981386,0,0.539703191637817,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0.608930956624282,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,1.31796636956512,3.59941638596045,0.508280908292259,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0.702213187313235,0.772043721344145,0.568326998791185,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.486412857275134,0.877199924551994,1.09775057645525,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0,0.234690248288502,0,0.476087281772027,0.195133647857799,0.157635144106191,0,0,0.491589944147214,0.172684981865896,0.144649058581512,0,1.63171705145613,0,0,0,0,0,0.504941854408746,0,0,0.646270193198397,0,0.445597348164788,0.283076530788832,0,0.292255857911312,0.395287777946524,0.642642632843614,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0.16488625294148,0,0,0,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0,0,0,0.228778173206523,0.849892149969277,1.11961161858926,0.138199973804424,0,0.316335993581135,0.203319467126849,0.216010681643603,0,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0.179427713218951,0,0,0,0.183151624267265,0,0,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.320125762024346,0.114870937911227,0.952587382566147,0,0.38581844092741,0.412085900803307,0,0,0,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.365855945745545,0,0,0,0,0.197008964751127,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0|short_description=p@chr9:121223244..121223258,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:121223244..121223258,- | |||
|id=chr9:121223244..121223258,- | |||
|ontology_enrichment_celltype=CL:0002563!1.69e-07!9;CL:0002251!1.69e-07!9;CL:0000144!3.18e-07!121;CL:0000012!3.18e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.05e-18,9;CL:0002251,1.05e-18,9;CL:0000239,4.54e-18,6;CL:0000677,4.54e-18,6;CL:0000584,4.54e-18,6;CL:0000075,1.54e-15,7;CL:0000066,7.63e-13,25;CL:0000223,5.09e-12,20;CL:0002076,3.07e-11,15;CL:0000213,1.56e-08,1;CL:0002078,1.56e-08,1;CL:0000115,1.56e-08,1;CL:0002262,1.56e-08,1;CL:1000398,1.56e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!1.69e-07!9;UBERON:0004808!1.69e-07!9;UBERON:0001277!1.69e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.05e-18,9;UBERON:0004808,1.05e-18,9;UBERON:0001277,1.05e-18,9;UBERON:0000485,2.56e-15,11;UBERON:0001242,5.75e-13,13;UBERON:0001262,5.75e-13,13;UBERON:0004786,5.75e-13,13;UBERON:0000344,3.07e-11,15;UBERON:0002394,1.56e-08,1;UBERON:0001281,1.56e-08,1;UBERON:0000353,1.56e-08,1;UBERON:0003497,1.56e-08,1;UBERON:0003909,1.56e-08,1;UBERON:0003928,1.56e-08,1;UBERON:0003835,1.56e-08,1;UBERON:0003513,1.56e-08,1;UBERON:0001280,1.56e-08,1;UBERON:0004647,1.56e-08,1;UBERON:0002294,1.56e-08,1;UBERON:0001173,1.56e-08,1;UBERON:0004912,1.56e-08,1;UBERON:0005171,1.56e-08,1;UBERON:0004923,5.26e-07,24 | |||
|phase1_expression=0.160148847104794,1.04692622291808,0.454999239389536,1.20985684522732,2.50447864973174,1.00727563147134,0.467225281191051,0,0.422366166455,0.468129052643987,0.171217968225505,0,0.171200729931206,0,0,0,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0.0992909512008853,0,0,0,1.14846392823004,0.430761996159075,0.646413698057667,0,0.252030129759931,0.443461021310609,0,0,0,0.866554859253824,0.166234645358492,2.24586291888606,0.837063261473815,0,0,1.76469446409304,0.683045484958446,0,0.377690453926732,0.202753862439029,0,0.782391344348039,0,0.439372365468944,0,0.279972843250725,0,0.335565212115473,0,0,0.257259436035947,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0.270011876663381,0.210324961351382,0,0.441737081903227,0,0.0958454710182364,0.919218786610021,0,0,0.153606533256243,0,0.182975287204819,0,0,0,0.15279824777681,0,0.142371680799103,0,0.302904773332736,0.151143120213571,9.85539261585705,0.860423876981386,0,0.539703191637817,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0.608930956624282,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,1.31796636956512,3.59941638596045,0.508280908292259,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0.702213187313235,0.772043721344145,0.568326998791185,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.486412857275134,0.877199924551994,1.09775057645525,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0,0.234690248288502,0,0.476087281772027,0.195133647857799,0.157635144106191,0,0,0.491589944147214,0.172684981865896,0.144649058581512,0,1.63171705145613,0,0,0,0,0,0.504941854408746,0,0,0.646270193198397,0,0.445597348164788,0.283076530788832,0,0.292255857911312,0.395287777946524,0.642642632843614,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0.16488625294148,0,0,0,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0,0,0,0.228778173206523,0.849892149969277,1.11961161858926,0.138199973804424,0,0.316335993581135,0.203319467126849,0.216010681643603,0,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0.179427713218951,0,0,0,0.183151624267265,0,0,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.320125762024346,0.114870937911227,0.952587382566147,0,0.38581844092741,0.412085900803307,0,0,0,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.365855945745545,0,0,0,0,0.197008964751127,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr9:121223244..121223258,- | |||
}} |
Revision as of 17:11, 14 September 2013
Short description: | p@chr9:121223244..121223258, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:121223244..121223258, - |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.05e-18 | 9 |
epithelial cell of alimentary canal | 1.05e-18 | 9 |
brush border epithelial cell | 4.54e-18 | 6 |
gut absorptive cell | 4.54e-18 | 6 |
enterocyte | 4.54e-18 | 6 |
columnar/cuboidal epithelial cell | 1.54e-15 | 7 |
epithelial cell | 7.63e-13 | 25 |
endodermal cell | 5.09e-12 | 20 |
endo-epithelial cell | 3.07e-11 | 15 |
lining cell | 1.56e-08 | 1 |
meso-epithelial cell | 1.56e-08 | 1 |
endothelial cell | 1.56e-08 | 1 |
endothelial cell of sinusoid | 1.56e-08 | 1 |
endothelial cell of hepatic sinusoid | 1.56e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.05e-18 | 9 |
gastrointestinal system epithelium | 1.05e-18 | 9 |
intestinal epithelium | 1.05e-18 | 9 |
simple columnar epithelium | 2.56e-15 | 11 |
intestinal mucosa | 5.75e-13 | 13 |
wall of intestine | 5.75e-13 | 13 |
gastrointestinal system mucosa | 5.75e-13 | 13 |
mucosa | 3.07e-11 | 15 |
bile duct | 1.56e-08 | 1 |
hepatic sinusoid | 1.56e-08 | 1 |
parenchyma | 1.56e-08 | 1 |
abdomen blood vessel | 1.56e-08 | 1 |
sinusoid | 1.56e-08 | 1 |
digestive system duct | 1.56e-08 | 1 |
abdominal segment blood vessel | 1.56e-08 | 1 |
trunk blood vessel | 1.56e-08 | 1 |
liver parenchyma | 1.56e-08 | 1 |
liver lobule | 1.56e-08 | 1 |
biliary system | 1.56e-08 | 1 |
biliary tree | 1.56e-08 | 1 |
biliary bud | 1.56e-08 | 1 |
hepatic duct | 1.56e-08 | 1 |
organ component layer | 5.26e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.