FFCP PHASE1:Mm9::chr13:40955525..40955556,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14538|HGNC=|MCL_coexpression_id=24|UniProt=Q6T5E4|association_with_transcript=24bp_to_ENSMUST00000110191,uc007qel.1_5end|description=CAGE_peak_4_at_Gcnt2_5end|id=chr13:40955525..40955556,+|ontology_enrichment_celltype=CL:0000066!4.99e-09!25;CL:0000223!1.47e-08!20;CL:0002563!7.74e-07!9;CL:0002251!7.74e-07!9|ontology_enrichment_celltype_v019_2=CL:0000066,1.00e-15,25;CL:0000223,5.92e-14,20;CL:0000239,2.48e-09,6;CL:0000677,2.48e-09,6;CL:0000584,2.48e-09,6;CL:0002563,4.12e-09,9;CL:0002251,4.12e-09,9;CL:0002076,1.09e-08,15;CL:0000075,8.15e-08,7;CL:0000182,3.28e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.03e-11!15;UBERON:0000160!8.04e-11!43;UBERON:0004119!8.36e-11!130;UBERON:0000925!8.36e-11!130;UBERON:0006595!8.36e-11!130;UBERON:0001007!2.93e-10!128;UBERON:0001555!2.93e-10!128;UBERON:0007026!2.93e-10!128;UBERON:0005409!4.92e-10!59;UBERON:0001242!9.99e-10!13;UBERON:0000060!9.99e-10!13;UBERON:0001262!9.99e-10!13;UBERON:0004786!9.99e-10!13;UBERON:0004921!2.28e-09!126;UBERON:0004185!2.28e-09!126;UBERON:0002107!3.57e-09!22;UBERON:0007499!3.57e-09!22;UBERON:0006925!3.57e-09!22;UBERON:0009497!3.57e-09!22;UBERON:0000015!3.57e-09!22;UBERON:0002423!3.57e-09!22;UBERON:0006235!3.57e-09!22;UBERON:0008835!3.57e-09!22;UBERON:0003894!3.57e-09!22;UBERON:0004161!3.57e-09!22;UBERON:0008836!3.57e-09!22;UBERON:0009854!2.11e-08!23;UBERON:0009856!2.11e-08!23;UBERON:0002365!7.00e-08!25;UBERON:0002330!7.00e-08!25;UBERON:0004923!1.91e-07!24;UBERON:0003350!7.74e-07!9;UBERON:0004808!7.74e-07!9;UBERON:0001277!7.74e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.38e-27,31;UBERON:0004119,4.86e-18,118;UBERON:0000925,4.86e-18,118;UBERON:0006595,4.86e-18,118;UBERON:0001007,1.02e-17,116;UBERON:0001555,1.02e-17,116;UBERON:0007026,1.02e-17,116;UBERON:0005409,1.52e-17,47;UBERON:0000344,2.35e-16,15;UBERON:0004921,4.32e-16,114;UBERON:0001242,4.35e-14,13;UBERON:0001262,4.35e-14,13;UBERON:0004786,4.35e-14,13;UBERON:0002107,1.05e-11,22;UBERON:0007499,1.05e-11,22;UBERON:0006925,1.05e-11,22;UBERON:0009497,1.05e-11,22;UBERON:0000015,1.05e-11,22;UBERON:0002423,1.05e-11,22;UBERON:0006235,1.05e-11,22;UBERON:0008835,1.05e-11,22;UBERON:0003894,1.05e-11,22;UBERON:0004161,1.05e-11,22;UBERON:0008836,1.05e-11,22;UBERON:0004923,2.81e-11,24;UBERON:0009854,5.38e-11,23;UBERON:0009856,5.38e-11,23;UBERON:0002365,9.33e-10,25;UBERON:0002330,9.33e-10,25;UBERON:0003350,4.12e-09,9;UBERON:0004808,4.12e-09,9;UBERON:0001277,4.12e-09,9;UBERON:0003929,8.17e-08,55;UBERON:0000485,4.10e-07,11|phase1_expression=0,16.40184415905,12.739978702907,22.9872800593191,22.5403078475856,9.23335995515394,3.50418960893289,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,2.29616883407888,0,0,8.47959840805055,5.96464130774642,14.9300310669905,7.75371593086335,11.2045040996662,9.12112413390595,10.5852654499171,8.42575940490158,0,0,0,1.1554064790051,0.831173226792462,1.83752420636132,1.67412652294763,0,1.0470474879476,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,5.50742528533188,3.44169550792555,11.5595126730318,5.93673510801599,8.4470934268197,8.51251085484938,2.66844398250329,0,0.779358013808606,0.35333957451034,0,0,0,0,2.59789249213457,2.28023878927589,3.0331466700887,7.30776830201984,0.258937883647172,0,0,0,0.230615497256059,0.150722640552623,0,0.251333182659351,4.44950941921873,0.578397427679647,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,5.62005521458901,1.07833612055328,0.599902730993408,1.01656181658452,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0,0,0.101839363850316,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.233530684734339,0,0.32833492815819,0.324275238183423,0.146199987425332,0.219550115291051,0,0.210289948564127,0.102904612379284,12.8863325363681,8.72686869989696,0,0.232236671860439,2.19074684247559,1.81515172161008,5.55945109612176,6.08722003560189,8.54152310780121,9.22314146454461,9.80207314321051,11.937388322469,11.307917052909,9.88701349519644,5.83572734661674,6.96994456390285,0.379335801906163,0,0,0.610953983535943,0.193952487167626,0.350679099451593,1.20149420536089,3.09981310757165,3.1399745568275,0.987177311374404,10.3758419480502,0,0.196558995113203,0.224862112384854,0,0.964708639009667,0.763877555344259,2.87696137450811,2.2698931748505,2.47105271869273,4.31304619582064,5.95425516269605,6.86482880852033,3.53610429125956,5.9201146462231,5.78932225636041,0.739012760666419,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0.159454768657487,1.3109065177259,0.690739927463582,0.433947175744535,0,0,0.491764273019036,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,2.84271122485043,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,1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| ||
|EntrezGene=14538 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=Q6T5E4 | |||
|association_with_transcript=24bp_to_ENSMUST00000110191,uc007qel.1_5end | |||
|description=CAGE_peak_4_at_Gcnt2_5end | |||
|id=chr13:40955525..40955556,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.99e-09!25;CL:0000223!1.47e-08!20;CL:0002563!7.74e-07!9;CL:0002251!7.74e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.00e-15,25;CL:0000223,5.92e-14,20;CL:0000239,2.48e-09,6;CL:0000677,2.48e-09,6;CL:0000584,2.48e-09,6;CL:0002563,4.12e-09,9;CL:0002251,4.12e-09,9;CL:0002076,1.09e-08,15;CL:0000075,8.15e-08,7;CL:0000182,3.28e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.03e-11!15;UBERON:0000160!8.04e-11!43;UBERON:0004119!8.36e-11!130;UBERON:0000925!8.36e-11!130;UBERON:0006595!8.36e-11!130;UBERON:0001007!2.93e-10!128;UBERON:0001555!2.93e-10!128;UBERON:0007026!2.93e-10!128;UBERON:0005409!4.92e-10!59;UBERON:0001242!9.99e-10!13;UBERON:0000060!9.99e-10!13;UBERON:0001262!9.99e-10!13;UBERON:0004786!9.99e-10!13;UBERON:0004921!2.28e-09!126;UBERON:0004185!2.28e-09!126;UBERON:0002107!3.57e-09!22;UBERON:0007499!3.57e-09!22;UBERON:0006925!3.57e-09!22;UBERON:0009497!3.57e-09!22;UBERON:0000015!3.57e-09!22;UBERON:0002423!3.57e-09!22;UBERON:0006235!3.57e-09!22;UBERON:0008835!3.57e-09!22;UBERON:0003894!3.57e-09!22;UBERON:0004161!3.57e-09!22;UBERON:0008836!3.57e-09!22;UBERON:0009854!2.11e-08!23;UBERON:0009856!2.11e-08!23;UBERON:0002365!7.00e-08!25;UBERON:0002330!7.00e-08!25;UBERON:0004923!1.91e-07!24;UBERON:0003350!7.74e-07!9;UBERON:0004808!7.74e-07!9;UBERON:0001277!7.74e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.38e-27,31;UBERON:0004119,4.86e-18,118;UBERON:0000925,4.86e-18,118;UBERON:0006595,4.86e-18,118;UBERON:0001007,1.02e-17,116;UBERON:0001555,1.02e-17,116;UBERON:0007026,1.02e-17,116;UBERON:0005409,1.52e-17,47;UBERON:0000344,2.35e-16,15;UBERON:0004921,4.32e-16,114;UBERON:0001242,4.35e-14,13;UBERON:0001262,4.35e-14,13;UBERON:0004786,4.35e-14,13;UBERON:0002107,1.05e-11,22;UBERON:0007499,1.05e-11,22;UBERON:0006925,1.05e-11,22;UBERON:0009497,1.05e-11,22;UBERON:0000015,1.05e-11,22;UBERON:0002423,1.05e-11,22;UBERON:0006235,1.05e-11,22;UBERON:0008835,1.05e-11,22;UBERON:0003894,1.05e-11,22;UBERON:0004161,1.05e-11,22;UBERON:0008836,1.05e-11,22;UBERON:0004923,2.81e-11,24;UBERON:0009854,5.38e-11,23;UBERON:0009856,5.38e-11,23;UBERON:0002365,9.33e-10,25;UBERON:0002330,9.33e-10,25;UBERON:0003350,4.12e-09,9;UBERON:0004808,4.12e-09,9;UBERON:0001277,4.12e-09,9;UBERON:0003929,8.17e-08,55;UBERON:0000485,4.10e-07,11 | |||
|phase1_expression=0,16.40184415905,12.739978702907,22.9872800593191,22.5403078475856,9.23335995515394,3.50418960893289,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,2.29616883407888,0,0,8.47959840805055,5.96464130774642,14.9300310669905,7.75371593086335,11.2045040996662,9.12112413390595,10.5852654499171,8.42575940490158,0,0,0,1.1554064790051,0.831173226792462,1.83752420636132,1.67412652294763,0,1.0470474879476,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,5.50742528533188,3.44169550792555,11.5595126730318,5.93673510801599,8.4470934268197,8.51251085484938,2.66844398250329,0,0.779358013808606,0.35333957451034,0,0,0,0,2.59789249213457,2.28023878927589,3.0331466700887,7.30776830201984,0.258937883647172,0,0,0,0.230615497256059,0.150722640552623,0,0.251333182659351,4.44950941921873,0.578397427679647,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,5.62005521458901,1.07833612055328,0.599902730993408,1.01656181658452,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0,0,0.101839363850316,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.233530684734339,0,0.32833492815819,0.324275238183423,0.146199987425332,0.219550115291051,0,0.210289948564127,0.102904612379284,12.8863325363681,8.72686869989696,0,0.232236671860439,2.19074684247559,1.81515172161008,5.55945109612176,6.08722003560189,8.54152310780121,9.22314146454461,9.80207314321051,11.937388322469,11.307917052909,9.88701349519644,5.83572734661674,6.96994456390285,0.379335801906163,0,0,0.610953983535943,0.193952487167626,0.350679099451593,1.20149420536089,3.09981310757165,3.1399745568275,0.987177311374404,10.3758419480502,0,0.196558995113203,0.224862112384854,0,0.964708639009667,0.763877555344259,2.87696137450811,2.2698931748505,2.47105271869273,4.31304619582064,5.95425516269605,6.86482880852033,3.53610429125956,5.9201146462231,5.78932225636041,0.739012760666419,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0.159454768657487,1.3109065177259,0.690739927463582,0.433947175744535,0,0,0.491764273019036,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,2.84271122485043,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,1.27099242518292,0.661585194164886,0.16488625294148,0,0.0603129249281559,0,0.328281799490123,5.82961673259701,0,0.170870880797853,0,0,0,0,0,0.849892149969277,2.09927178485487,0.690999869022119,0.954670618015114,0,0.406638934253697,0.216010681643603,0.627264888043406,1.52853794622324,0.404593039154462,0.909188012978695,0.523511883968059,2.46268449254406,0,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0.221985953374065,0.179427713218951,0.503653849092235,0.386379188064381,0.93841237725591,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666740183404846,0.618105171716683,0,0.505394423527595,0.25347929989024,0.754505365544305,1.40462261204824,0.768301828858431,1.60819313075717,0.952587382566147,0.927074607558844,1.54327376370964,0.824171801606613,0.441596760403192,0.342869252385415,0.70990322463735,1.1921809497366,0.436039249896986,0.752875043322645,0.423073039458382,0.182927972872773,0,0.543216455383447,0,0.474540072496697,1.0835493061312,0.409231043169689,0.309873682371932,0.771626443924566,0,1.40358965067245,1.93383948643468,0,0,0 | |||
|short_description=p4@Gcnt2 | |||
}} |
Revision as of 00:30, 13 September 2013
Short description: | p4@Gcnt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gcnt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 24bp_to_ENSMUST00000110191, uc007qel.1_5end |
EntrezGene: | Gcnt2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.00e-15 | 25 |
endodermal cell | 5.92e-14 | 20 |
brush border epithelial cell | 2.48e-09 | 6 |
gut absorptive cell | 2.48e-09 | 6 |
enterocyte | 2.48e-09 | 6 |
intestinal epithelial cell | 4.12e-09 | 9 |
epithelial cell of alimentary canal | 4.12e-09 | 9 |
endo-epithelial cell | 1.09e-08 | 15 |
columnar/cuboidal epithelial cell | 8.15e-08 | 7 |
hepatocyte | 3.28e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.