FFCP PHASE1:Mm9::chr1:132748202..132748234,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=430|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:132748202..132748234,+|id=chr1:132748202..132748234,+|ontology_enrichment_celltype=CL:0000066!7.90e-11!25;CL:0000223!7.29e-10!20;CL:0002563!1.08e-09!9;CL:0002251!1.08e-09!9;CL:0000239!3.22e-07!6;CL:0000677!3.22e-07!6;CL:0000212!3.22e-07!6;CL:0000584!3.22e-07!6;CL:0002076!5.76e-07!15|ontology_enrichment_celltype_v019_2=CL:0000066,3.36e-14,25;CL:0002563,3.79e-14,9;CL:0002251,3.79e-14,9;CL:0000223,3.28e-12,20;CL:0000239,2.51e-10,6;CL:0000677,2.51e-10,6;CL:0000584,2.51e-10,6;CL:0000075,9.99e-09,7;CL:0002076,9.59e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!1.73e-19!128;UBERON:0001555!1.73e-19!128;UBERON:0007026!1.73e-19!128;UBERON:0004119!6.92e-19!130;UBERON:0000925!6.92e-19!130;UBERON:0006595!6.92e-19!130;UBERON:0004921!8.06e-18!126;UBERON:0004185!8.06e-18!126;UBERON:0000344!3.18e-16!15;UBERON:0000160!5.14e-16!43;UBERON:0001242!5.33e-14!13;UBERON:0000060!5.33e-14!13;UBERON:0001262!5.33e-14!13;UBERON:0004786!5.33e-14!13;UBERON:0005409!1.61e-13!59;UBERON:0003350!1.08e-09!9;UBERON:0004808!1.08e-09!9;UBERON:0001277!1.08e-09!9;UBERON:0004923!3.11e-08!24;UBERON:0007023!7.26e-08!51;UBERON:0000485!1.81e-07!11;UBERON:0003929!9.54e-07!55;UBERON:0002365!9.84e-07!25;UBERON:0002330!9.84e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.27e-31,31;UBERON:0000344,2.85e-24,15;UBERON:0005409,1.49e-21,47;UBERON:0001242,8.09e-21,13;UBERON:0001262,8.09e-21,13;UBERON:0004786,8.09e-21,13;UBERON:0001007,1.78e-16,116;UBERON:0001555,1.78e-16,116;UBERON:0007026,1.78e-16,116;UBERON:0004119,5.09e-16,118;UBERON:0000925,5.09e-16,118;UBERON:0006595,5.09e-16,118;UBERON:0004921,1.61e-14,114;UBERON:0003350,3.79e-14,9;UBERON:0004808,3.79e-14,9;UBERON:0001277,3.79e-14,9;UBERON:0004923,1.22e-13,24;UBERON:0000485,3.14e-11,11;UBERON:0007023,1.09e-08,51;UBERON:0002108,5.84e-08,4;UBERON:0002365,1.64e-07,25;UBERON:0002330,1.64e-07,25|phase1_expression=0,12.2141392673776,5.91499011206397,34.4809200889786,22.0394121176393,3.18970616632591,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,35.9982951285165,20.8762445771125,3.44539178469012,3.87685796543167,10.9890328669803,53.0165340283283,19.1542898617547,6.43018480900384,0,0,0,3.17736781726402,5.65197794218874,6.53341940039581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16254326188832,8.15965600449301,25.9057531986152,29.2399387851451,18.8171292580881,6.03911006566533,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,12.6744106488157,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,20.5030937339934,0,0,56.2005521458901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,62.4491499839378,19.0404407997752,0,0,0,0.201683524623343,0,0.380451252225118,28.4717436926707,2.30578536613615,3.2673577144035,3.78017296878187,3.50935356814416,51.2327062932906,67.867347660654,38.4342657380929,0,0,0,0,0,0,0,0.442830443938806,0.156998727841375,0,8.89357881261447,0,0,0,0,0,0,0,0.162135226775035,0,5.75072826109418,0,0.624075346229121,1.51547326768267,0.717589654087649,12.0610880340842,0.554259570499814,0,0,0,0,0,0,0,0,0,0.478364305972461,0.491589944147214,1.20879487306127,0.289298117163023,0,0,24.0964493779328,2.75936746304733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,1.15479086080775,2.65490276679926,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882113592219848,0,0,0,0,0,21.569581910609,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.108005340821801,0,0,0,0.0826534557253359,0.785267825952089,28.2560641776108,8.69875038321696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.680191150845634,0,0,0,0.19318959403219,6.00583921443782,4.39563898241436,1.2862102744744,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0|short_description=p@chr1:132748202..132748234,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=430 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:132748202..132748234,+ | |||
|id=chr1:132748202..132748234,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.90e-11!25;CL:0000223!7.29e-10!20;CL:0002563!1.08e-09!9;CL:0002251!1.08e-09!9;CL:0000239!3.22e-07!6;CL:0000677!3.22e-07!6;CL:0000212!3.22e-07!6;CL:0000584!3.22e-07!6;CL:0002076!5.76e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.36e-14,25;CL:0002563,3.79e-14,9;CL:0002251,3.79e-14,9;CL:0000223,3.28e-12,20;CL:0000239,2.51e-10,6;CL:0000677,2.51e-10,6;CL:0000584,2.51e-10,6;CL:0000075,9.99e-09,7;CL:0002076,9.59e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.73e-19!128;UBERON:0001555!1.73e-19!128;UBERON:0007026!1.73e-19!128;UBERON:0004119!6.92e-19!130;UBERON:0000925!6.92e-19!130;UBERON:0006595!6.92e-19!130;UBERON:0004921!8.06e-18!126;UBERON:0004185!8.06e-18!126;UBERON:0000344!3.18e-16!15;UBERON:0000160!5.14e-16!43;UBERON:0001242!5.33e-14!13;UBERON:0000060!5.33e-14!13;UBERON:0001262!5.33e-14!13;UBERON:0004786!5.33e-14!13;UBERON:0005409!1.61e-13!59;UBERON:0003350!1.08e-09!9;UBERON:0004808!1.08e-09!9;UBERON:0001277!1.08e-09!9;UBERON:0004923!3.11e-08!24;UBERON:0007023!7.26e-08!51;UBERON:0000485!1.81e-07!11;UBERON:0003929!9.54e-07!55;UBERON:0002365!9.84e-07!25;UBERON:0002330!9.84e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.27e-31,31;UBERON:0000344,2.85e-24,15;UBERON:0005409,1.49e-21,47;UBERON:0001242,8.09e-21,13;UBERON:0001262,8.09e-21,13;UBERON:0004786,8.09e-21,13;UBERON:0001007,1.78e-16,116;UBERON:0001555,1.78e-16,116;UBERON:0007026,1.78e-16,116;UBERON:0004119,5.09e-16,118;UBERON:0000925,5.09e-16,118;UBERON:0006595,5.09e-16,118;UBERON:0004921,1.61e-14,114;UBERON:0003350,3.79e-14,9;UBERON:0004808,3.79e-14,9;UBERON:0001277,3.79e-14,9;UBERON:0004923,1.22e-13,24;UBERON:0000485,3.14e-11,11;UBERON:0007023,1.09e-08,51;UBERON:0002108,5.84e-08,4;UBERON:0002365,1.64e-07,25;UBERON:0002330,1.64e-07,25 | |||
|phase1_expression=0,12.2141392673776,5.91499011206397,34.4809200889786,22.0394121176393,3.18970616632591,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,35.9982951285165,20.8762445771125,3.44539178469012,3.87685796543167,10.9890328669803,53.0165340283283,19.1542898617547,6.43018480900384,0,0,0,3.17736781726402,5.65197794218874,6.53341940039581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16254326188832,8.15965600449301,25.9057531986152,29.2399387851451,18.8171292580881,6.03911006566533,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,12.6744106488157,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,20.5030937339934,0,0,56.2005521458901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,62.4491499839378,19.0404407997752,0,0,0,0.201683524623343,0,0.380451252225118,28.4717436926707,2.30578536613615,3.2673577144035,3.78017296878187,3.50935356814416,51.2327062932906,67.867347660654,38.4342657380929,0,0,0,0,0,0,0,0.442830443938806,0.156998727841375,0,8.89357881261447,0,0,0,0,0,0,0,0.162135226775035,0,5.75072826109418,0,0.624075346229121,1.51547326768267,0.717589654087649,12.0610880340842,0.554259570499814,0,0,0,0,0,0,0,0,0,0.478364305972461,0.491589944147214,1.20879487306127,0.289298117163023,0,0,24.0964493779328,2.75936746304733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,1.15479086080775,2.65490276679926,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882113592219848,0,0,0,0,0,21.569581910609,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.108005340821801,0,0,0,0.0826534557253359,0.785267825952089,28.2560641776108,8.69875038321696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.680191150845634,0,0,0,0.19318959403219,6.00583921443782,4.39563898241436,1.2862102744744,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr1:132748202..132748234,+ | |||
}} |
Revision as of 18:46, 13 September 2013
Short description: | p@chr1:132748202..132748234, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:132748202..132748234, + |
Coexpression cluster: | MCL_coexpression_mm9:430 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.36e-14 | 25 |
intestinal epithelial cell | 3.79e-14 | 9 |
epithelial cell of alimentary canal | 3.79e-14 | 9 |
endodermal cell | 3.28e-12 | 20 |
brush border epithelial cell | 2.51e-10 | 6 |
gut absorptive cell | 2.51e-10 | 6 |
enterocyte | 2.51e-10 | 6 |
columnar/cuboidal epithelial cell | 9.99e-09 | 7 |
endo-epithelial cell | 9.59e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.27e-31 | 31 |
mucosa | 2.85e-24 | 15 |
gastrointestinal system | 1.49e-21 | 47 |
intestinal mucosa | 8.09e-21 | 13 |
wall of intestine | 8.09e-21 | 13 |
gastrointestinal system mucosa | 8.09e-21 | 13 |
digestive system | 1.78e-16 | 116 |
digestive tract | 1.78e-16 | 116 |
primitive gut | 1.78e-16 | 116 |
endoderm-derived structure | 5.09e-16 | 118 |
endoderm | 5.09e-16 | 118 |
presumptive endoderm | 5.09e-16 | 118 |
subdivision of digestive tract | 1.61e-14 | 114 |
epithelium of mucosa | 3.79e-14 | 9 |
gastrointestinal system epithelium | 3.79e-14 | 9 |
intestinal epithelium | 3.79e-14 | 9 |
organ component layer | 1.22e-13 | 24 |
simple columnar epithelium | 3.14e-11 | 11 |
adult organism | 1.09e-08 | 51 |
small intestine | 5.84e-08 | 4 |
exocrine gland | 1.64e-07 | 25 |
exocrine system | 1.64e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.