FFCP PHASE1:Mm9::chr11:16814742..16814746,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=8|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:16814742..16814746,+|id=chr11:16814742..16814746,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,5.55e-07,3;CL:0000359,5.55e-07,3;CL:0002539,5.55e-07,3;CL:0000514,5.55e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.39e-11,23;UBERON:0009856,1.39e-11,23;UBERON:0002107,1.95e-10,22;UBERON:0007499,1.95e-10,22;UBERON:0006925,1.95e-10,22;UBERON:0009497,1.95e-10,22;UBERON:0000015,1.95e-10,22;UBERON:0002423,1.95e-10,22;UBERON:0006235,1.95e-10,22;UBERON:0008835,1.95e-10,22;UBERON:0003894,1.95e-10,22;UBERON:0004161,1.95e-10,22;UBERON:0008836,1.95e-10,22;UBERON:0002365,8.06e-09,25;UBERON:0002330,8.06e-09,25;UBERON:0001135,5.55e-07,3;UBERON:0004237,5.55e-07,3;UBERON:0004695,5.55e-07,3;UBERON:0002111,5.55e-07,3;UBERON:0004178,5.55e-07,3|phase1_expression=0.480446541314382,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0.234064526321993,0,0.0797721589953364,0,0,0.333109761815663,0,0,0,0,0,0.340173160604279,0,0,0.639969691173627,1.14704640533585,0,0.430761996159075,0.430942465371778,0.950117097281869,0.504060259519861,0.665191531965914,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,7.80560271448579,6.38674666682942,5.87349606917381,1.56478268869608,0,0,0.388859798148567,0.55994568650145,0,0,0,0,0.514518872071894,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0,0,0.52091337055676,0,0.56276261003168,0.15279824777681,0,0.284743361598206,0,0,0.0755715601067855,0.289864488701678,2.58127163094416,0,12.4131734076698,7.79731700937203,2.24013443548668,6.31999890592883,0.681721290312231,0.259786004602869,0,0,3.84979432242953,0,0,3.89683873820185,3.04031838570118,2.02209778005913,5.1382745873577,0.258937883647172,0,0.867426633830679,0.608930956624282,0.230615497256059,0.753613202763113,0.587943535678524,0,0.494389935468748,0,0,0.808834249737046,0,1.45462575940567,1.86391761218122,0,0.209446706813455,0.766371165625774,0,0,0,0,0,0.502617408451458,0,0.255715457330331,0,0.324482526135515,0.407357455401265,0.622034853050465,0.252722758433675,0.210441855886474,0.780722657776222,0.229902104433473,0.180062129805349,0.150704817835715,0.408218994907967,0.512454881139399,0.374806898238915,1.03481348295606,0.215567992932842,0.567318240503458,0.879755620819744,1.97276159184817,2.22437799380478,1.0447564995665,2.26360350048738,0.995171334092466,0,0,0,0,0,0,0,0,0.308534225774757,0,0.268273401399619,0,0,0.164167464079095,0.162137619091711,0.292399974850665,0.439100230582101,0.134206418760372,0,0.205809224758569,0.330418782983798,0,0.426576501070468,1.85789337488351,0.644337306610467,0.201683524623343,0.444756087689741,0,0,0.494096864172033,0.502670417600539,0,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0.799739588268102,0,0.203651327845314,0.193952487167626,0.140271639780637,0.569128834118316,1.03327103585722,0.941992367048249,0.123397163921801,9.19003143970162,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0.287696137450811,2.10775794807546,2.47105271869273,8.62609239164127,1.86070473834252,3.12037673114561,0.757736633841335,13.9929982547091,1.92977408545347,0.369506380333209,0,0,0.339490171550376,0.234690248288502,0.502518772325447,0.476087281772027,0.390267295715598,0.788175720530955,0.221464689648775,0.159454768657487,0.81931657357869,0.690739927463582,0.433947175744535,1.50791283939272,0,0.491764273019036,0,0.160550589987792,0,0.491804836130026,1.00988370881749,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0,0,0.567760340833074,0.534196811001766,1.14020871547503,0.164970122972535,0,0.242780636154981,0.906970670894253,0.188605079755898,0,0.614870295887855,0.258428293168221,0,1.42598951353889,0.316036757935816,1.05418608574999,0,0.340439605753788,0.900305470156551,0.129358683782755,0.857348140126369,0.177340233642274,1.96205699362278,2.46823530903181,0,0.469343416127421,1.0591603543191,0.441056796109924,2.63818004706368,1.93757312035087,1.02531972377865,2.02932984805332,0.984845398470368,0.582961673259701,0,0,0.619160603889667,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,1.90934123603023,0,0,0.648032044930808,1.46361807210128,0.87345025498471,1.61837215661785,0.661227645802687,1.57053565190418,0.388844919875379,0,0,0.598066184175915,0.496375471371293,0.388902376688095,0.904118764344118,0.675824501963113,0.352071715937262,0.13020438484395,0.209718688851422,0,0.864090018773596,0.316011120628178,0.608175645870493,1.02710957164827,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0.358855426437903,0.167884616364078,0.386379188064381,0.563047426353546,0.73260649706906,0.214368379079066,0,0,0.920650473014354,0,0.343706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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:16814742..16814746,+ | |||
|id=chr11:16814742..16814746,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,5.55e-07,3;CL:0000359,5.55e-07,3;CL:0002539,5.55e-07,3;CL:0000514,5.55e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.39e-11,23;UBERON:0009856,1.39e-11,23;UBERON:0002107,1.95e-10,22;UBERON:0007499,1.95e-10,22;UBERON:0006925,1.95e-10,22;UBERON:0009497,1.95e-10,22;UBERON:0000015,1.95e-10,22;UBERON:0002423,1.95e-10,22;UBERON:0006235,1.95e-10,22;UBERON:0008835,1.95e-10,22;UBERON:0003894,1.95e-10,22;UBERON:0004161,1.95e-10,22;UBERON:0008836,1.95e-10,22;UBERON:0002365,8.06e-09,25;UBERON:0002330,8.06e-09,25;UBERON:0001135,5.55e-07,3;UBERON:0004237,5.55e-07,3;UBERON:0004695,5.55e-07,3;UBERON:0002111,5.55e-07,3;UBERON:0004178,5.55e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0.234064526321993,0,0.0797721589953364,0,0,0.333109761815663,0,0,0,0,0,0.340173160604279,0,0,0.639969691173627,1.14704640533585,0,0.430761996159075,0.430942465371778,0.950117097281869,0.504060259519861,0.665191531965914,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,7.80560271448579,6.38674666682942,5.87349606917381,1.56478268869608,0,0,0.388859798148567,0.55994568650145,0,0,0,0,0.514518872071894,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0,0,0.52091337055676,0,0.56276261003168,0.15279824777681,0,0.284743361598206,0,0,0.0755715601067855,0.289864488701678,2.58127163094416,0,12.4131734076698,7.79731700937203,2.24013443548668,6.31999890592883,0.681721290312231,0.259786004602869,0,0,3.84979432242953,0,0,3.89683873820185,3.04031838570118,2.02209778005913,5.1382745873577,0.258937883647172,0,0.867426633830679,0.608930956624282,0.230615497256059,0.753613202763113,0.587943535678524,0,0.494389935468748,0,0,0.808834249737046,0,1.45462575940567,1.86391761218122,0,0.209446706813455,0.766371165625774,0,0,0,0,0,0.502617408451458,0,0.255715457330331,0,0.324482526135515,0.407357455401265,0.622034853050465,0.252722758433675,0.210441855886474,0.780722657776222,0.229902104433473,0.180062129805349,0.150704817835715,0.408218994907967,0.512454881139399,0.374806898238915,1.03481348295606,0.215567992932842,0.567318240503458,0.879755620819744,1.97276159184817,2.22437799380478,1.0447564995665,2.26360350048738,0.995171334092466,0,0,0,0,0,0,0,0,0.308534225774757,0,0.268273401399619,0,0,0.164167464079095,0.162137619091711,0.292399974850665,0.439100230582101,0.134206418760372,0,0.205809224758569,0.330418782983798,0,0.426576501070468,1.85789337488351,0.644337306610467,0.201683524623343,0.444756087689741,0,0,0.494096864172033,0.502670417600539,0,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0.799739588268102,0,0.203651327845314,0.193952487167626,0.140271639780637,0.569128834118316,1.03327103585722,0.941992367048249,0.123397163921801,9.19003143970162,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0.287696137450811,2.10775794807546,2.47105271869273,8.62609239164127,1.86070473834252,3.12037673114561,0.757736633841335,13.9929982547091,1.92977408545347,0.369506380333209,0,0,0.339490171550376,0.234690248288502,0.502518772325447,0.476087281772027,0.390267295715598,0.788175720530955,0.221464689648775,0.159454768657487,0.81931657357869,0.690739927463582,0.433947175744535,1.50791283939272,0,0.491764273019036,0,0.160550589987792,0,0.491804836130026,1.00988370881749,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0,0,0.567760340833074,0.534196811001766,1.14020871547503,0.164970122972535,0,0.242780636154981,0.906970670894253,0.188605079755898,0,0.614870295887855,0.258428293168221,0,1.42598951353889,0.316036757935816,1.05418608574999,0,0.340439605753788,0.900305470156551,0.129358683782755,0.857348140126369,0.177340233642274,1.96205699362278,2.46823530903181,0,0.469343416127421,1.0591603543191,0.441056796109924,2.63818004706368,1.93757312035087,1.02531972377865,2.02932984805332,0.984845398470368,0.582961673259701,0,0,0.619160603889667,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,1.90934123603023,0,0,0.648032044930808,1.46361807210128,0.87345025498471,1.61837215661785,0.661227645802687,1.57053565190418,0.388844919875379,0,0,0.598066184175915,0.496375471371293,0.388902376688095,0.904118764344118,0.675824501963113,0.352071715937262,0.13020438484395,0.209718688851422,0,0.864090018773596,0.316011120628178,0.608175645870493,1.02710957164827,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0.358855426437903,0.167884616364078,0.386379188064381,0.563047426353546,0.73260649706906,0.214368379079066,0,0,0.920650473014354,0,0.343706364687375,0,0.755393897389701,0,0,0,0,0.103787347584177,0,0.341467211508268,0.972426868273176,0,0.551530525350042,0,0.824140228955577,0,0.252697211763798,0.760437899670719,0.377252682772152,0.561849044819294,0.384150914429216,0.689225627467359,0,1.39061191133827,0.578727661391115,1.64834360321323,0.588795680537589,0.342869252385415,1.06485483695602,0.715308569841963,0.581385666529314,0.846984423737976,0.592302255241736,0.73171189149109,0,0.407412341537585,1.12228454331548,0.237270036248348,0.591026894253381,0,0.154936841185966,0.771626443924566,0.499621155875892,0.701794825336225,0,0.765153328275374,0.220591419119515,0 | |||
|short_description=p@chr11:16814742..16814746,+ | |||
}} |
Revision as of 19:11, 12 September 2013
Short description: | p@chr11:16814742..16814746, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:16814742..16814746, + |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 5.55e-07 | 3 |
vascular associated smooth muscle cell | 5.55e-07 | 3 |
aortic smooth muscle cell | 5.55e-07 | 3 |
smooth muscle myoblast | 5.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 1.39e-11 | 23 |
sac | 1.39e-11 | 23 |
liver | 1.95e-10 | 22 |
epithelial sac | 1.95e-10 | 22 |
digestive gland | 1.95e-10 | 22 |
epithelium of foregut-midgut junction | 1.95e-10 | 22 |
anatomical boundary | 1.95e-10 | 22 |
hepatobiliary system | 1.95e-10 | 22 |
foregut-midgut junction | 1.95e-10 | 22 |
hepatic diverticulum | 1.95e-10 | 22 |
liver primordium | 1.95e-10 | 22 |
septum transversum | 1.95e-10 | 22 |
liver bud | 1.95e-10 | 22 |
exocrine gland | 8.06e-09 | 25 |
exocrine system | 8.06e-09 | 25 |
smooth muscle tissue | 5.55e-07 | 3 |
blood vessel smooth muscle | 5.55e-07 | 3 |
arterial system smooth muscle | 5.55e-07 | 3 |
artery smooth muscle tissue | 5.55e-07 | 3 |
aorta smooth muscle tissue | 5.55e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.