FFCP PHASE1:Mm9::chr5:135422309..135422313,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=72|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:135422309..135422313,-|id=chr5:135422309..135422313,-|ontology_enrichment_celltype=CL:0000068!8.96e-08!3;CL:0002202!8.96e-08!3;CL:0000069!8.96e-08!3;CL:0002632!8.96e-08!3;CL:0002368!8.96e-08!3;CL:0000307!8.96e-08!3;CL:0000377!8.96e-08!3;CL:0000349!3.91e-07!3;CL:0000351!3.91e-07!3|ontology_enrichment_celltype_v019_2=CL:0000068,1.16e-30,3;CL:0002202,1.16e-30,3;CL:0000069,1.16e-30,3;CL:0002632,1.16e-30,3;CL:0002368,1.16e-30,3;CL:0000307,1.16e-30,3;CL:0000377,1.16e-30,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.10e-09!15;UBERON:0004923!2.51e-08!24;UBERON:0003126!8.96e-08!3;UBERON:0001005!8.96e-08!3;UBERON:0007196!8.96e-08!3;UBERON:0001558!8.96e-08!3;UBERON:0000358!3.91e-07!3;UBERON:0000307!3.91e-07!3;UBERON:0000331!5.39e-07!3;UBERON:0002116!5.39e-07!3;UBERON:0001204!5.39e-07!3;UBERON:0001168!5.39e-07!3;UBERON:0001242!8.19e-07!13;UBERON:0000060!8.19e-07!13;UBERON:0001262!8.19e-07!13;UBERON:0004786!8.19e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.16e-30,3;UBERON:0001005,1.16e-30,3;UBERON:0007196,1.16e-30,3;UBERON:0001558,1.16e-30,3;UBERON:0000305,4.58e-11,1;UBERON:0000998,1.12e-10,1;UBERON:0007194,1.12e-10,1;UBERON:0006868,1.12e-10,1|phase1_expression=0,0.348975407639361,0,0.30246421130683,0,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.95995453676044,0.91763712426868,1.14846392823004,0,0.430942465371778,0.950117097281869,0.252030129759931,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.36069539438128,7.60079596425296,9.60496445528088,0,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0.329397909448022,0,0.596869416123452,0.38992817423824,0,0.216138049874694,0,0.569003702859245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0,0.63549621259146,0.220528398054962,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.15241361331,0,0,0,0.116876902181569,0.226730383615211,0.887943813496259,0.62799699626633,1.00730769818447,0,0,0,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:135422309..135422313,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:135422309..135422313,- | |||
|id=chr5:135422309..135422313,- | |||
|ontology_enrichment_celltype=CL:0000068!8.96e-08!3;CL:0002202!8.96e-08!3;CL:0000069!8.96e-08!3;CL:0002632!8.96e-08!3;CL:0002368!8.96e-08!3;CL:0000307!8.96e-08!3;CL:0000377!8.96e-08!3;CL:0000349!3.91e-07!3;CL:0000351!3.91e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.16e-30,3;CL:0002202,1.16e-30,3;CL:0000069,1.16e-30,3;CL:0002632,1.16e-30,3;CL:0002368,1.16e-30,3;CL:0000307,1.16e-30,3;CL:0000377,1.16e-30,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.10e-09!15;UBERON:0004923!2.51e-08!24;UBERON:0003126!8.96e-08!3;UBERON:0001005!8.96e-08!3;UBERON:0007196!8.96e-08!3;UBERON:0001558!8.96e-08!3;UBERON:0000358!3.91e-07!3;UBERON:0000307!3.91e-07!3;UBERON:0000331!5.39e-07!3;UBERON:0002116!5.39e-07!3;UBERON:0001204!5.39e-07!3;UBERON:0001168!5.39e-07!3;UBERON:0001242!8.19e-07!13;UBERON:0000060!8.19e-07!13;UBERON:0001262!8.19e-07!13;UBERON:0004786!8.19e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.16e-30,3;UBERON:0001005,1.16e-30,3;UBERON:0007196,1.16e-30,3;UBERON:0001558,1.16e-30,3;UBERON:0000305,4.58e-11,1;UBERON:0000998,1.12e-10,1;UBERON:0007194,1.12e-10,1;UBERON:0006868,1.12e-10,1 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,0,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.95995453676044,0.91763712426868,1.14846392823004,0,0.430942465371778,0.950117097281869,0.252030129759931,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.36069539438128,7.60079596425296,9.60496445528088,0,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0.329397909448022,0,0.596869416123452,0.38992817423824,0,0.216138049874694,0,0.569003702859245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,0,0.63549621259146,0.220528398054962,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.15241361331,0,0,0,0.116876902181569,0.226730383615211,0.887943813496259,0.62799699626633,1.00730769818447,0,0,0,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:135422309..135422313,- | |||
}} |
Revision as of 06:37, 14 September 2013
Short description: | p@chr5:135422309..135422313, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:135422309..135422313, - |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.16e-30 | 3 |
epithelial cell of tracheobronchial tree | 1.16e-30 | 3 |
branched duct epithelial cell | 1.16e-30 | 3 |
epithelial cell of lower respiratory tract | 1.16e-30 | 3 |
respiratory epithelial cell | 1.16e-30 | 3 |
tracheal epithelial cell | 1.16e-30 | 3 |
tracheoblast | 1.16e-30 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.16e-30 | 3 |
respiratory airway | 1.16e-30 | 3 |
tracheobronchial tree | 1.16e-30 | 3 |
lower respiratory tract | 1.16e-30 | 3 |
amnion | 4.58e-11 | 1 |
seminal vesicle | 1.12e-10 | 1 |
vesicular gland | 1.12e-10 | 1 |
seminal fluid secreting gland | 1.12e-10 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.