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FFCP PHASE1:Mm9::chr9:54874348..54874406,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=110834|HGNC=|MCL_coexpression_id=114|UniProt=Q0VBK4,E9Q1K5,Q8R4G9|association_with_transcript=0bp_to_ENSMUST00000034851,ENSMUST00000114316,NM_145129,uc009prx.1,uc009pry.1_5end|description=CAGE_peak_1_at_Chrna3_5end|id=chr9:54874348..54874406,-|ontology_enrichment_celltype=CL:0000540!1.11e-12!33;CL:0000047!1.11e-12!33;CL:0000031!1.11e-12!33;CL:0000404!1.11e-12!33;CL:0000393!3.02e-09!39;CL:0000211!3.02e-09!39;CL:0000107!3.83e-08!9;CL:0000221!1.20e-07!44;CL:0000133!1.20e-07!44;CL:0002319!1.35e-07!43;CL:0000117!5.19e-07!23;CL:0000337!5.19e-07!23|ontology_enrichment_celltype_v019_2=CL:0000540,2.94e-13,33;CL:0000047,2.94e-13,33;CL:0000031,2.94e-13,33;CL:0000404,2.94e-13,33;CL:0000107,8.61e-10,9;CL:0000393,1.21e-09,39;CL:0000211,1.21e-09,39;CL:0002319,1.91e-08,43;CL:0000221,4.88e-08,44;CL:0000133,4.88e-08,44;CL:0000117,7.11e-07,23;CL:0000337,7.11e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.02e-14!102;UBERON:0000924!1.02e-14!102;UBERON:0006601!1.02e-14!102;UBERON:0002346!1.33e-11!71;UBERON:0003075!1.33e-11!71;UBERON:0007284!1.33e-11!71;UBERON:0001017!1.48e-09!73;UBERON:0005743!1.48e-09!73;UBERON:0000073!9.67e-09!75;UBERON:0001016!9.67e-09!75;UBERON:0002410!3.83e-08!9;UBERON:0002342!5.15e-08!10;UBERON:0005062!5.15e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002410,8.61e-10,9;UBERON:0004121,2.78e-08,95;UBERON:0000924,2.78e-08,95;UBERON:0006601,2.78e-08,95;UBERON:0001017,1.09e-07,73;UBERON:0000010,2.46e-07,11;UBERON:0001016,3.75e-07,75;UBERON:0002369,7.55e-07,7;UBERON:0006858,7.55e-07,7|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0.699932108126813,1.43752564364972,0,0,0,0,0,0,11.3297218081375,9.52183762689659,13.3104594736298,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0,8.56952953211411,6.62605622854841,0.489963196859816,0.575072826109418,0,3.30347642998166,6.89511625660014,3.5329502648936,7.78129097608144,8.14240028061446,7.8137005583514,4.18774498502071,3.93933827022176,3.0559649555362,12.374400589894,8.96941589034349,12.8615617619457,0,0,0,0,0,0,1.29955283489534,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,0.34255163915718,0,27.0164693097981,8.32729568477452,19.485790611977,12.9144678463393,11.4549206819993,13.5227013206061,11.1843266283411,0,1.15679485535929,0,0,0,0,5.59175283654366,1.17112318804619,0.209446706813455,2.04365644166873,0,0,0.127070227073065,10.9347166765521,0.915001205637253,1.25654352112864,0.173824320192276,1.02286182932132,5.40248915854856,2.59586020908412,0,0,0,0.420883711772948,26.6746908073543,37.4740430226561,41.9544762446464,15.8240058727501,13.6753363294169,13.1957131893395,13.6804517857204,3.88055056108524,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0,0,0.219550115291051,0.268412837520744,0,1.23485534855141,0,2.90895623329899,12.1574302805083,14.6309103272076,12.371276286921,10.0841762311671,6.67134131534611,9.3210556795154,5.21981967698963,9.22314146454461,6.78605063760728,6.56556357735798,6.43381487493096,2.69645822596266,1.72910439899755,2.98711909881551,0.948339504765408,2.28497025219458,0,1.01825663922657,0.581857461502877,0.280543279561274,0,0,0,0,0,0.333690211432188,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,1.51593129416388,0.488894929326078,0.509235257325564,0.469380496577004,0.335012514883631,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0.275936746304732,2.88991061978026,3.04750385139728,0,0,108.219319259776,122.988204453441,232.872692949156,23.1799734013975,43.4457414460669,48.1230102341015,160.709848564933,186.751493205328,210.688385645497,7.06906896127976,0,0.35613120733451,0,0,0,1.21390318077491,0.906970670894253,0.565815239267694,0.885905678642318,0.922305443831782,1.55056975900933,0.363533729477506,0.712994756769443,2.52829406348653,0,0,0.680879211507576,4.68158844481407,1.03486947026204,0.643011105094777,0.354680467284547,0.535106452806212,0.164549020602121,0,0.23467170806371,0,8.15955072803359,0,0.161464426695906,0,0.358117032009409,0.984845398470368,4.66369338607761,3.52308073819968,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,9.96458379780576,6.91286188231286,7.77638453916969,6.48173717644853,6.55087691238533,5.93403124093211,6.28166263512553,3.14107130380836,2.59229946583586,1.24267862617385,0,0,0,0,0.129159823477731,0.337912250981556,0,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0,8.113962949352,0.187682475451182,0,0.643105137237198,0,1.6942555278512,2.30162618253588,0.572895513439397,0.515559547031063,1.37016503954128,0,0,0,0.906284817968409,0,3.42498247027783,4.78829848081237,3.41467211508268,2.43106717068294,2.72497111416377,2.20612210140017,2.66696073361938,2.06035057238894,2.56735367673452,2.52697211763797,3.54871019846336,2.26351609663291,1.591905626988,3.26528277264833,1.83793500657962,2.38146845641537,1.85414921511769,2.31491064556446,0.412085900803307,1.47198920134397,3.42869252385415,1.95223386775271,1.43061713968393,2.76158191601424,2.1645157495526,1.69229215783353,2.19513567447327,3.6829759601298,1.35804113845862,2.24456908663095,2.84724043498018,2.1670986122624,0.818462086339379,2.16911577660352,1.54325288784913,2.24829520144151,1.16965804222704,1.07435527024149,1.91288332068843,1.76473135295612,0.927471342481686|short_description=p1@Chrna3}}
|EntrezGene=110834
|HGNC=
|MCL_coexpression_id=114
|UniProt=Q0VBK4,E9Q1K5,Q8R4G9
|association_with_transcript=0bp_to_ENSMUST00000034851,ENSMUST00000114316,NM_145129,uc009prx.1,uc009pry.1_5end
|description=CAGE_peak_1_at_Chrna3_5end
|id=chr9:54874348..54874406,-
|ontology_enrichment_celltype=CL:0000540!1.11e-12!33;CL:0000047!1.11e-12!33;CL:0000031!1.11e-12!33;CL:0000404!1.11e-12!33;CL:0000393!3.02e-09!39;CL:0000211!3.02e-09!39;CL:0000107!3.83e-08!9;CL:0000221!1.20e-07!44;CL:0000133!1.20e-07!44;CL:0002319!1.35e-07!43;CL:0000117!5.19e-07!23;CL:0000337!5.19e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000540,2.94e-13,33;CL:0000047,2.94e-13,33;CL:0000031,2.94e-13,33;CL:0000404,2.94e-13,33;CL:0000107,8.61e-10,9;CL:0000393,1.21e-09,39;CL:0000211,1.21e-09,39;CL:0002319,1.91e-08,43;CL:0000221,4.88e-08,44;CL:0000133,4.88e-08,44;CL:0000117,7.11e-07,23;CL:0000337,7.11e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.02e-14!102;UBERON:0000924!1.02e-14!102;UBERON:0006601!1.02e-14!102;UBERON:0002346!1.33e-11!71;UBERON:0003075!1.33e-11!71;UBERON:0007284!1.33e-11!71;UBERON:0001017!1.48e-09!73;UBERON:0005743!1.48e-09!73;UBERON:0000073!9.67e-09!75;UBERON:0001016!9.67e-09!75;UBERON:0002410!3.83e-08!9;UBERON:0002342!5.15e-08!10;UBERON:0005062!5.15e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0002410,8.61e-10,9;UBERON:0004121,2.78e-08,95;UBERON:0000924,2.78e-08,95;UBERON:0006601,2.78e-08,95;UBERON:0001017,1.09e-07,73;UBERON:0000010,2.46e-07,11;UBERON:0001016,3.75e-07,75;UBERON:0002369,7.55e-07,7;UBERON:0006858,7.55e-07,7
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0.699932108126813,1.43752564364972,0,0,0,0,0,0,11.3297218081375,9.52183762689659,13.3104594736298,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0,8.56952953211411,6.62605622854841,0.489963196859816,0.575072826109418,0,3.30347642998166,6.89511625660014,3.5329502648936,7.78129097608144,8.14240028061446,7.8137005583514,4.18774498502071,3.93933827022176,3.0559649555362,12.374400589894,8.96941589034349,12.8615617619457,0,0,0,0,0,0,1.29955283489534,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,0.34255163915718,0,27.0164693097981,8.32729568477452,19.485790611977,12.9144678463393,11.4549206819993,13.5227013206061,11.1843266283411,0,1.15679485535929,0,0,0,0,5.59175283654366,1.17112318804619,0.209446706813455,2.04365644166873,0,0,0.127070227073065,10.9347166765521,0.915001205637253,1.25654352112864,0.173824320192276,1.02286182932132,5.40248915854856,2.59586020908412,0,0,0,0.420883711772948,26.6746908073543,37.4740430226561,41.9544762446464,15.8240058727501,13.6753363294169,13.1957131893395,13.6804517857204,3.88055056108524,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0,0,0.219550115291051,0.268412837520744,0,1.23485534855141,0,2.90895623329899,12.1574302805083,14.6309103272076,12.371276286921,10.0841762311671,6.67134131534611,9.3210556795154,5.21981967698963,9.22314146454461,6.78605063760728,6.56556357735798,6.43381487493096,2.69645822596266,1.72910439899755,2.98711909881551,0.948339504765408,2.28497025219458,0,1.01825663922657,0.581857461502877,0.280543279561274,0,0,0,0,0,0.333690211432188,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,1.51593129416388,0.488894929326078,0.509235257325564,0.469380496577004,0.335012514883631,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0,0,0,0,0.275936746304732,2.88991061978026,3.04750385139728,0,0,108.219319259776,122.988204453441,232.872692949156,23.1799734013975,43.4457414460669,48.1230102341015,160.709848564933,186.751493205328,210.688385645497,7.06906896127976,0,0.35613120733451,0,0,0,1.21390318077491,0.906970670894253,0.565815239267694,0.885905678642318,0.922305443831782,1.55056975900933,0.363533729477506,0.712994756769443,2.52829406348653,0,0,0.680879211507576,4.68158844481407,1.03486947026204,0.643011105094777,0.354680467284547,0.535106452806212,0.164549020602121,0,0.23467170806371,0,8.15955072803359,0,0.161464426695906,0,0.358117032009409,0.984845398470368,4.66369338607761,3.52308073819968,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,9.96458379780576,6.91286188231286,7.77638453916969,6.48173717644853,6.55087691238533,5.93403124093211,6.28166263512553,3.14107130380836,2.59229946583586,1.24267862617385,0,0,0,0,0.129159823477731,0.337912250981556,0,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0,8.113962949352,0.187682475451182,0,0.643105137237198,0,1.6942555278512,2.30162618253588,0.572895513439397,0.515559547031063,1.37016503954128,0,0,0,0.906284817968409,0,3.42498247027783,4.78829848081237,3.41467211508268,2.43106717068294,2.72497111416377,2.20612210140017,2.66696073361938,2.06035057238894,2.56735367673452,2.52697211763797,3.54871019846336,2.26351609663291,1.591905626988,3.26528277264833,1.83793500657962,2.38146845641537,1.85414921511769,2.31491064556446,0.412085900803307,1.47198920134397,3.42869252385415,1.95223386775271,1.43061713968393,2.76158191601424,2.1645157495526,1.69229215783353,2.19513567447327,3.6829759601298,1.35804113845862,2.24456908663095,2.84724043498018,2.1670986122624,0.818462086339379,2.16911577660352,1.54325288784913,2.24829520144151,1.16965804222704,1.07435527024149,1.91288332068843,1.76473135295612,0.927471342481686
|short_description=p1@Chrna3
}}

Revision as of 18:15, 14 September 2013

Short description:p1@Chrna3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Chrna3_5end
Coexpression cluster:MCL_coexpression_mm9:114
Association with transcript: 0bp_to_ENSMUST00000034851, ENSMUST00000114316, NM_145129, uc009prx.1, uc009pry.1_5end
EntrezGene:Chrna3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Chrna3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C311.33
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.78
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.14
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D727.02
adrenal gland, embryo E14.CNhs11038.406-44C58.33
adrenal gland, embryo E16.CNhs11004.1254-43D619.49
adrenal gland, embryo E17.CNhs11043.1263-45I112.91
adrenal gland, embryo E18.CNhs11026.1262-18F511.45
adrenal gland, neonate N00.CNhs11191.1311-23C113.52
adrenal gland, neonate N25.CNhs11223.1377-27I311.18
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A410.93
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F25.40
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C626.67
eyeball, embryo E14.CNhs10521.399-16E237.47
eyeball, embryo E15.CNhs10593.426-16C941.95
eyeball, embryo E17.CNhs11023.1261-18D415.82
eyeball, neonate N00.CNhs11207.633-15C613.68
eyeball, neonate N01.CNhs11140.1532-43E713.20
eyeball, neonate N02.CNhs11205.1551-44G813.68
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I512.16
intestine, embryo E13.CNhs11010.381-16D514.63
intestine, embryo E15.CNhs10602.976-16D812.37
intestine, embryo E16.CNhs10585.463-22H410.08
intestine, embryo E17.CNhs10582.482-18D36.67
intestine, embryo E18.CNhs10526.1289-20F79.32
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E99.22
intestine, neonate N06.CNhs11102.688-20B86.79
intestine, neonate N07.CNhs11095.720-20F26.57
intestine, neonate N10.CNhs11098.755-23A56.43
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1108.22
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2122.99
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3232.87
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D723.18
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D843.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D948.12
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4160.71
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5186.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6210.69
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E64.68
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F88.16
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C93.52
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E39.96
stomach, embryo E15.CNhs10603.1252-16G86.91
stomach, embryo E16.CNhs11022.459-17D47.78
stomach, embryo E17.CNhs11006.1035-18D56.48
stomach, embryo E18.CNhs10999.1286-20C66.55
stomach, neonate N03.CNhs11193.1340-24B85.93
stomach, neonate N07.CNhs11210.718-18A96.28
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I12.59
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E48.11
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I83.42
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.93





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
autonomic nervous system8.61e-109
ectoderm-derived structure2.78e-0895
ectoderm2.78e-0895
presumptive ectoderm2.78e-0895
central nervous system1.09e-0773
peripheral nervous system2.46e-0711
nervous system3.75e-0775
adrenal gland7.55e-077
adrenal/interrenal gland7.55e-077







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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