FFCP PHASE1:Mm9::chr1:75233152..75233163,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56812|HGNC=|MCL_coexpression_id=0|UniProt=Q9QYI5,Q3TB24|association_with_transcript=112bp_to_ENSMUST00000055223,ENSMUST00000082158,ENSMUST00000116582,ENSMUST00000169680_5end|description=CAGE_peak_6_at_Dnajb2_5end|id=chr1:75233152..75233163,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000333,3.15e-07,10;CL:0000095,3.15e-07,10;CL:0000243,3.15e-07,10;CL:0000123,3.15e-07,10;CL:0000125,3.15e-07,10;CL:0000030,3.15e-07,10;CL:0000339,3.15e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.21e-08!102;UBERON:0000924!4.21e-08!102;UBERON:0006601!4.21e-08!102;UBERON:0007023!3.69e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.16e-07,95;UBERON:0000924,1.16e-07,95;UBERON:0006601,1.16e-07,95;UBERON:0007023,1.40e-07,51;UBERON:0001016,6.24e-07,75|phase1_expression=0.960893082628764,2.09385244583617,0.909998478779072,0.60492842261366,0,0.839396359559449,2.10251376535973,0.516493293766305,0.84473233291,1.40438715793196,0.171217968225505,0,0.342401459862411,0.34968160967599,0,0.404950534779652,0.699561878128147,0.157731082679119,0.137114433605739,1.69755860719212,3.31668831589172,0.198581902401771,0,0.95995453676044,1.37645568640302,3.44539178469012,1.7230479846363,1.29282739611533,0.760093677825496,0,1.55211357458713,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,1.36609096991689,0.971020706062307,1.38486499773135,1.11514624341466,2.20256102594018,0.782391344348039,1.96222640742402,3.07560655828261,2.13872888981712,1.53985063787899,2.87505128729943,4.36234775750115,0,1.00828139742739,0.771778308107841,0,0,0,0,1.90149421051854,2.37191172448392,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,1.79760066311043,5.76327457982332,0.103689612308478,0.135005938331691,0,1.99955689082663,2.42955395046775,0,0.287536413054709,0.919218786610021,2.20231761998777,1.78762273319263,2.4577045320999,0.659431438650969,0.548925861614458,0.52091337055676,2.23346399201105,1.12552522006336,2.59757021220577,0.589257170947335,0.569486723196412,0.559198337475902,2.49896437999507,1.5870027622425,1.73918693221007,0,3.39985666853875,1.07940638327563,0.649776417447669,1.34408066129201,1.26399978118577,1.1930122580464,1.55871602761721,1.41335829804136,0.563373679106722,0,2.54805239706646,0,1.08245520505607,1.26679932737549,0.505524445014783,1.1418387971906,0.258937883647172,1.33597925158342,0.693941307064543,0.304465478312141,0,0.301445281105245,0.352766121407114,1.50799909595611,1.48316980640624,0.433798070759735,0,0.161766849947409,0.441683036920787,0.484875253135222,0,3.22058876712702,2.51336048176146,0.255457055208591,0.599075622529601,0,0,2.09706895166752,2.74500361691176,0.628271760564322,1.04294592115366,0.767146371990992,1.66230435647648,1.29793010454206,0.611036183101898,0.248813941220186,1.76905930903572,1.47309299120532,0,0.229902104433473,0.360124259610698,0.90422890701429,0.680364991513279,0.768682321709099,1.03071897015702,1.81092359517311,0.215567992932842,0.189106080167819,0,0.657587197282725,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.617068451549513,0.465067889500816,0.536546802799238,0.467061369468678,1.31647879930784,0.656669856316381,1.05389452409612,1.90059983652932,1.09775057645525,2.01309628140558,1.89260953707715,0.205809224758569,0,1.05780226665418,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0.570676878337677,0,0.329397909448022,1.00534083520108,0.198956472041151,0,0,0.648414149624083,0.398282546508734,0,0.571242563048644,2.25415471346161,0.814605311381257,1.35766741017338,0.561086559122548,0.632365371242573,0.885660887877613,1.56998727841375,1.85095745882701,2.37162101669719,0,0.196558995113203,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0.823684239564244,0,0.372140947668503,0.312037673114561,1.01031551178845,1.07638448113147,1.4473305640901,2.58654466233247,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.670025029767263,1.90434912708811,1.17080188714679,1.10344600874334,0.44292937929755,0.956728611944923,1.14704320301017,0.863424909329478,1.01254341007058,0,0,0.983528546038072,0.551873492609465,2.56880943980467,2.57865710502847,0.819674726883377,0.252470927204373,0,0.390438744296638,0.430846795465598,0.955875191810208,0.668396022247182,0.566153061577665,0,0.292255857911312,0.395287777946524,0.642642632843614,1.13552068166615,0.890328018336276,0.325773918707152,0.989820737835213,1.32745138339963,0.242780636154981,0.302323556964751,0.943025398779491,1.47650946440386,0.614870295887855,1.55056975900933,1.09060118843252,1.06949213515416,0,0,1.03135543248187,2.04263763452273,0,0.517434735131018,1.50035924522115,1.06404140185364,0.713475270408282,1.48094118541909,0.608929898229199,1.40803024838226,1.0591603543191,0.882113592219848,2.14352128823924,0.968786560175433,0.784068024066026,1.55184047204077,1.64140899745061,0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| ||
|EntrezGene=56812 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q9QYI5,Q3TB24 | |||
|association_with_transcript=112bp_to_ENSMUST00000055223,ENSMUST00000082158,ENSMUST00000116582,ENSMUST00000169680_5end | |||
|description=CAGE_peak_6_at_Dnajb2_5end | |||
|id=chr1:75233152..75233163,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,3.15e-07,10;CL:0000095,3.15e-07,10;CL:0000243,3.15e-07,10;CL:0000123,3.15e-07,10;CL:0000125,3.15e-07,10;CL:0000030,3.15e-07,10;CL:0000339,3.15e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.21e-08!102;UBERON:0000924!4.21e-08!102;UBERON:0006601!4.21e-08!102;UBERON:0007023!3.69e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.16e-07,95;UBERON:0000924,1.16e-07,95;UBERON:0006601,1.16e-07,95;UBERON:0007023,1.40e-07,51;UBERON:0001016,6.24e-07,75 | |||
|phase1_expression=0.960893082628764,2.09385244583617,0.909998478779072,0.60492842261366,0,0.839396359559449,2.10251376535973,0.516493293766305,0.84473233291,1.40438715793196,0.171217968225505,0,0.342401459862411,0.34968160967599,0,0.404950534779652,0.699561878128147,0.157731082679119,0.137114433605739,1.69755860719212,3.31668831589172,0.198581902401771,0,0.95995453676044,1.37645568640302,3.44539178469012,1.7230479846363,1.29282739611533,0.760093677825496,0,1.55211357458713,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,1.36609096991689,0.971020706062307,1.38486499773135,1.11514624341466,2.20256102594018,0.782391344348039,1.96222640742402,3.07560655828261,2.13872888981712,1.53985063787899,2.87505128729943,4.36234775750115,0,1.00828139742739,0.771778308107841,0,0,0,0,1.90149421051854,2.37191172448392,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,1.79760066311043,5.76327457982332,0.103689612308478,0.135005938331691,0,1.99955689082663,2.42955395046775,0,0.287536413054709,0.919218786610021,2.20231761998777,1.78762273319263,2.4577045320999,0.659431438650969,0.548925861614458,0.52091337055676,2.23346399201105,1.12552522006336,2.59757021220577,0.589257170947335,0.569486723196412,0.559198337475902,2.49896437999507,1.5870027622425,1.73918693221007,0,3.39985666853875,1.07940638327563,0.649776417447669,1.34408066129201,1.26399978118577,1.1930122580464,1.55871602761721,1.41335829804136,0.563373679106722,0,2.54805239706646,0,1.08245520505607,1.26679932737549,0.505524445014783,1.1418387971906,0.258937883647172,1.33597925158342,0.693941307064543,0.304465478312141,0,0.301445281105245,0.352766121407114,1.50799909595611,1.48316980640624,0.433798070759735,0,0.161766849947409,0.441683036920787,0.484875253135222,0,3.22058876712702,2.51336048176146,0.255457055208591,0.599075622529601,0,0,2.09706895166752,2.74500361691176,0.628271760564322,1.04294592115366,0.767146371990992,1.66230435647648,1.29793010454206,0.611036183101898,0.248813941220186,1.76905930903572,1.47309299120532,0,0.229902104433473,0.360124259610698,0.90422890701429,0.680364991513279,0.768682321709099,1.03071897015702,1.81092359517311,0.215567992932842,0.189106080167819,0,0.657587197282725,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.617068451549513,0.465067889500816,0.536546802799238,0.467061369468678,1.31647879930784,0.656669856316381,1.05389452409612,1.90059983652932,1.09775057645525,2.01309628140558,1.89260953707715,0.205809224758569,0,1.05780226665418,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0.570676878337677,0,0.329397909448022,1.00534083520108,0.198956472041151,0,0,0.648414149624083,0.398282546508734,0,0.571242563048644,2.25415471346161,0.814605311381257,1.35766741017338,0.561086559122548,0.632365371242573,0.885660887877613,1.56998727841375,1.85095745882701,2.37162101669719,0,0.196558995113203,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0.823684239564244,0,0.372140947668503,0.312037673114561,1.01031551178845,1.07638448113147,1.4473305640901,2.58654466233247,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.670025029767263,1.90434912708811,1.17080188714679,1.10344600874334,0.44292937929755,0.956728611944923,1.14704320301017,0.863424909329478,1.01254341007058,0,0,0.983528546038072,0.551873492609465,2.56880943980467,2.57865710502847,0.819674726883377,0.252470927204373,0,0.390438744296638,0.430846795465598,0.955875191810208,0.668396022247182,0.566153061577665,0,0.292255857911312,0.395287777946524,0.642642632843614,1.13552068166615,0.890328018336276,0.325773918707152,0.989820737835213,1.32745138339963,0.242780636154981,0.302323556964751,0.943025398779491,1.47650946440386,0.614870295887855,1.55056975900933,1.09060118843252,1.06949213515416,0,0,1.03135543248187,2.04263763452273,0,0.517434735131018,1.50035924522115,1.06404140185364,0.713475270408282,1.48094118541909,0.608929898229199,1.40803024838226,1.0591603543191,0.882113592219848,2.14352128823924,0.968786560175433,0.784068024066026,1.55184047204077,1.64140899745061,0.291480836629851,1.48340241608408,0.341741761595705,0,0.185194527369712,0.188368457004691,0.136694227721025,0.686334519619568,0.509935289981566,0.69975726161829,1.10559979043539,0.954670618015114,0.316335993581135,0.203319467126849,0.216010681643603,0.418176592028937,0.218362563746178,0.134864346384821,0.578574190077352,0.785267825952089,0.90730481304255,1.86401793926078,13.5286305284206,0.299033092087958,0.165458490457098,0.194451188344048,0.774958940866387,0.168956125490778,0.117357238645754,0.5208175393758,0.734015410979976,6.76435538312817,6.62469014393091,0,0,0,0,0.179026695667481,0,0,0,0.201932899896295,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,1.36038230169127,0,0.358855426437903,1.00730769818447,1.15913756419314,0.750729901804728,0.549454872801795,1.92931541171159,3.00943262421218,1.12950368523413,0,1.145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| |||
|short_description=p6@Dnajb2 | |||
}} |
Revision as of 20:58, 13 September 2013
Short description: | p6@Dnajb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Dnajb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 112bp_to_ENSMUST00000055223, ENSMUST00000082158, ENSMUST00000116582, ENSMUST00000169680_5end |
EntrezGene: | Dnajb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 3.15e-07 | 10 |
neuron associated cell | 3.15e-07 | 10 |
glial cell (sensu Vertebrata) | 3.15e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 3.15e-07 | 10 |
glial cell | 3.15e-07 | 10 |
glioblast | 3.15e-07 | 10 |
glioblast (sensu Vertebrata) | 3.15e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.16e-07 | 95 |
ectoderm | 1.16e-07 | 95 |
presumptive ectoderm | 1.16e-07 | 95 |
adult organism | 1.40e-07 | 51 |
nervous system | 6.24e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.