FFCP PHASE1:Mm9::chr9:95696366..95696380,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2318|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:95696366..95696380,-|id=chr9:95696366..95696380,-|ontology_enrichment_celltype=CL:0002563!6.46e-07!9;CL:0002251!6.46e-07!9|ontology_enrichment_celltype_v019_2=CL:0000682,4.27e-10,3;CL:0000239,2.25e-08,6;CL:0000677,2.25e-08,6;CL:0000584,2.25e-08,6;CL:0000066,2.61e-08,25;CL:0000075,3.51e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.50e-15!59;UBERON:0000160!3.82e-13!43;UBERON:0000344!6.47e-13!15;UBERON:0001242!1.08e-10!13;UBERON:0000060!1.08e-10!13;UBERON:0001262!1.08e-10!13;UBERON:0004786!1.08e-10!13;UBERON:0004119!1.32e-08!130;UBERON:0000925!1.32e-08!130;UBERON:0006595!1.32e-08!130;UBERON:0004923!1.43e-08!24;UBERON:0001007!2.54e-08!128;UBERON:0001555!2.54e-08!128;UBERON:0007026!2.54e-08!128;UBERON:0004921!3.03e-07!126;UBERON:0004185!3.03e-07!126;UBERON:0003350!6.46e-07!9;UBERON:0004808!6.46e-07!9;UBERON:0001277!6.46e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.26e-19,47;UBERON:0000344,1.09e-15,15;UBERON:0000160,1.06e-13,31;UBERON:0001242,7.63e-11,13;UBERON:0001262,7.63e-11,13;UBERON:0004786,7.63e-11,13;UBERON:0001007,2.61e-10,116;UBERON:0001555,2.61e-10,116;UBERON:0007026,2.61e-10,116;UBERON:0004119,4.71e-10,118;UBERON:0000925,4.71e-10,118;UBERON:0006595,4.71e-10,118;UBERON:0004923,3.32e-09,24;UBERON:0004921,3.02e-08,114;UBERON:0001962,7.42e-08,2;UBERON:0001961,7.42e-08,2;UBERON:0001744,7.42e-08,2;UBERON:0001155,7.75e-07,2;UBERON:0000059,7.75e-07,2|phase1_expression=0,2.79180326111489,2.27499619694768,0,0.500895729946347,3.18970616632591,6.77476657727024,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0,14.7193028969934,9.63518980482114,4.01962374880514,4.30761996159075,5.817723282519,1.90023419456374,0.756090389279792,5.76499327703792,0,0,0,0.288851619751275,0.664938581433969,0.612508068787107,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,1.08245520505607,1.52015919285059,0,0.68510327831436,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0,3.72783522436244,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.59963200862735,0.793351699990633,0,0,0.38660238396628,0,0.444756087689741,0.951128130562796,0,0.494096864172033,1.25667604400135,0,0.58489226135736,1.79763881730844,1.51296634912286,2.19055400579804,0,0,0,0.610953983535943,0.581857461502877,0.350679099451593,0.126473074248515,0.295220295959204,0.470996183524124,0.493588655687202,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.538192240565737,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0,1.15479086080775,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,12.4107180341965,0,0,0.756037385752609,1.04544148007234,0.655087691238533,2.29269388854195,6.52962300230154,6.02038666563268,4.92536898508813,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0.579568782096571,9.3841237725591,3.6630324853453,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.50695859978048,0,0.0936415074698824,0,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.532427418478012,0,0.290692833264657,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0,0,0.644613162144895,0,0,0.231867835620421|short_description=p@chr9:95696366..95696380,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2318 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:95696366..95696380,- | |||
|id=chr9:95696366..95696380,- | |||
|ontology_enrichment_celltype=CL:0002563!6.46e-07!9;CL:0002251!6.46e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.27e-10,3;CL:0000239,2.25e-08,6;CL:0000677,2.25e-08,6;CL:0000584,2.25e-08,6;CL:0000066,2.61e-08,25;CL:0000075,3.51e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.50e-15!59;UBERON:0000160!3.82e-13!43;UBERON:0000344!6.47e-13!15;UBERON:0001242!1.08e-10!13;UBERON:0000060!1.08e-10!13;UBERON:0001262!1.08e-10!13;UBERON:0004786!1.08e-10!13;UBERON:0004119!1.32e-08!130;UBERON:0000925!1.32e-08!130;UBERON:0006595!1.32e-08!130;UBERON:0004923!1.43e-08!24;UBERON:0001007!2.54e-08!128;UBERON:0001555!2.54e-08!128;UBERON:0007026!2.54e-08!128;UBERON:0004921!3.03e-07!126;UBERON:0004185!3.03e-07!126;UBERON:0003350!6.46e-07!9;UBERON:0004808!6.46e-07!9;UBERON:0001277!6.46e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.26e-19,47;UBERON:0000344,1.09e-15,15;UBERON:0000160,1.06e-13,31;UBERON:0001242,7.63e-11,13;UBERON:0001262,7.63e-11,13;UBERON:0004786,7.63e-11,13;UBERON:0001007,2.61e-10,116;UBERON:0001555,2.61e-10,116;UBERON:0007026,2.61e-10,116;UBERON:0004119,4.71e-10,118;UBERON:0000925,4.71e-10,118;UBERON:0006595,4.71e-10,118;UBERON:0004923,3.32e-09,24;UBERON:0004921,3.02e-08,114;UBERON:0001962,7.42e-08,2;UBERON:0001961,7.42e-08,2;UBERON:0001744,7.42e-08,2;UBERON:0001155,7.75e-07,2;UBERON:0000059,7.75e-07,2 | |||
|phase1_expression=0,2.79180326111489,2.27499619694768,0,0.500895729946347,3.18970616632591,6.77476657727024,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0,14.7193028969934,9.63518980482114,4.01962374880514,4.30761996159075,5.817723282519,1.90023419456374,0.756090389279792,5.76499327703792,0,0,0,0.288851619751275,0.664938581433969,0.612508068787107,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,1.08245520505607,1.52015919285059,0,0.68510327831436,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0,3.72783522436244,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.59963200862735,0.793351699990633,0,0,0.38660238396628,0,0.444756087689741,0.951128130562796,0,0.494096864172033,1.25667604400135,0,0.58489226135736,1.79763881730844,1.51296634912286,2.19055400579804,0,0,0,0.610953983535943,0.581857461502877,0.350679099451593,0.126473074248515,0.295220295959204,0.470996183524124,0.493588655687202,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.538192240565737,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0,1.15479086080775,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,12.4107180341965,0,0,0.756037385752609,1.04544148007234,0.655087691238533,2.29269388854195,6.52962300230154,6.02038666563268,4.92536898508813,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0.579568782096571,9.3841237725591,3.6630324853453,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.50695859978048,0,0.0936415074698824,0,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.532427418478012,0,0.290692833264657,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0,0,0.644613162144895,0,0,0.231867835620421 | |||
|short_description=p@chr9:95696366..95696380,- | |||
}} |
Revision as of 19:01, 14 September 2013
Short description: | p@chr9:95696366..95696380, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:95696366..95696380, - |
Coexpression cluster: | MCL_coexpression_mm9:2318 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.27e-10 | 3 |
brush border epithelial cell | 2.25e-08 | 6 |
gut absorptive cell | 2.25e-08 | 6 |
enterocyte | 2.25e-08 | 6 |
epithelial cell | 2.61e-08 | 25 |
columnar/cuboidal epithelial cell | 3.51e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.26e-19 | 47 |
mucosa | 1.09e-15 | 15 |
intestine | 1.06e-13 | 31 |
intestinal mucosa | 7.63e-11 | 13 |
wall of intestine | 7.63e-11 | 13 |
gastrointestinal system mucosa | 7.63e-11 | 13 |
digestive system | 2.61e-10 | 116 |
digestive tract | 2.61e-10 | 116 |
primitive gut | 2.61e-10 | 116 |
endoderm-derived structure | 4.71e-10 | 118 |
endoderm | 4.71e-10 | 118 |
presumptive endoderm | 4.71e-10 | 118 |
organ component layer | 3.32e-09 | 24 |
subdivision of digestive tract | 3.02e-08 | 114 |
gut-associated lymphoid tissue | 7.42e-08 | 2 |
mucosa-associated lymphoid tissue | 7.42e-08 | 2 |
lymphoid tissue | 7.42e-08 | 2 |
colon | 7.75e-07 | 2 |
large intestine | 7.75e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.