FFCP PHASE1:Mm9::chr14:70605792..70605804,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20410|HGNC=|MCL_coexpression_id=2117|UniProt=Q8K0M3|association_with_transcript=24bp_to_uc007unk.1_5end|description=CAGE_peak_9_at_Sorbs3_5end|id=chr14:70605792..70605804,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000128,1.90e-08,6;CL:0000126,1.90e-08,6;CL:0000127,1.90e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!1.56e-12!26;UBERON:0000990!1.56e-12!26;UBERON:0003133!1.29e-11!24;UBERON:0000991!3.24e-10!18;UBERON:0005564!3.24e-10!18;UBERON:0004176!8.51e-10!17;UBERON:0009196!8.51e-10!17;UBERON:0009117!8.51e-10!17;UBERON:0004535!3.86e-09!23;UBERON:0001009!3.86e-09!23;UBERON:0001048!6.21e-09!147;UBERON:0004872!1.16e-08!33;UBERON:0000473!3.77e-08!14;UBERON:0007100!1.12e-07!18;UBERON:0000948!1.12e-07!18;UBERON:0005498!1.12e-07!18;UBERON:0004140!1.12e-07!18;UBERON:0009881!1.12e-07!18;UBERON:0004141!1.12e-07!18;UBERON:0003084!1.12e-07!18;UBERON:0007005!1.12e-07!18;UBERON:0004139!1.12e-07!18;UBERON:0004291!1.12e-07!18;UBERON:0003101!2.22e-07!16;UBERON:0000079!2.22e-07!16;UBERON:0003135!3.83e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0005156,8.54e-17,26;UBERON:0000990,8.54e-17,26;UBERON:0004176,2.99e-16,17;UBERON:0009196,2.99e-16,17;UBERON:0009117,2.99e-16,17;UBERON:0003133,3.41e-16,24;UBERON:0000991,3.75e-15,18;UBERON:0005564,3.75e-15,18;UBERON:0000473,2.11e-12,14;UBERON:0003135,2.08e-11,15;UBERON:0003101,1.54e-10,16;UBERON:0000079,1.54e-10,16;UBERON:0002323,9.45e-09,37;UBERON:0004458,9.45e-09,37;UBERON:0000474,1.83e-08,9;UBERON:0003886,2.05e-08,38;UBERON:0002553,4.24e-08,39;UBERON:0000926,4.33e-08,120;UBERON:0004120,4.33e-08,120;UBERON:0006603,4.33e-08,120;UBERON:0001048,6.35e-08,134;UBERON:0003134,5.41e-07,8|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.506884656097573,0.183546752161682,2.34717403304412,0.872100625521786,8.5677611266444,6.02732687130279,2.93971485413261,2.87505128729943,0,0,0,0.771778308107841,5.44413535883638,3.09403255366465,0,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.307213066512487,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0.151452386666368,0.302286240427142,2.89864488701678,0.860423876981386,0,0.539703191637817,0,1.34408066129201,0.702222100658759,0,0,0,1.12674735821344,0,2.54805239706646,0,0,0,0,0.91347103775248,0.776813650941515,0.742210695324124,0,0.304465478312141,0.922461989024234,0.452167921657868,1.76383060703557,1.25666591329675,0.988779870937496,3.32578520915797,0,0.161766849947409,0.662524555381181,0,0,0,0.209446706813455,0,0,0,0,0.449371918214468,1.37250180845588,0,0.521472960576829,0.511430914660661,0.20778804455956,0.324482526135515,1.42575109390443,0.622034853050465,0,0.841767423545896,0.390361328888111,0,0.360124259610698,0.753524089178575,0.612328492361951,0.640568601424249,0.562210347358373,0.517406741478031,0.215567992932842,0,0,0.219195732427575,0,0.348252166522167,1.4404749548556,0.995171334092466,0,0,0,0.828503090142008,0.234526059981096,0.36012412292203,0.710234206755631,0.590292695242212,1.07986979021165,0.930135779001631,1.60964040839772,1.05088808130453,0.493679549740441,0.492502392237286,1.62137619091711,1.60819986167866,0.878200461164203,1.07365135008297,0.210289948564127,0.205809224758569,0,0.264450566663544,0,0,0,0.403367049246685,0,0,0,0,0,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0,0,0,0.203651327845314,0,0.140271639780637,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,5.35046248357617,0,0,0.744281895337007,0.624075346229121,0.252578877947112,0.358794827043824,6.75420929908714,2.03228509183265,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,3.12213836572478,0.472905432318573,0.8858587585951,0.478364305972461,1.47476983244164,1.03610989119537,1.73578870297814,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0.163934945376675,1.00988370881749,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0.321321316421807,1.13552068166615,1.42452482933804,1.62886959353576,2.8044920905331,0,0.242780636154981,0,0.565815239267694,1.18120757152309,0.307435147943927,1.29214146584111,0,1.06949213515416,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0.913394847343798,1.40803024838226,1.0591603543191,0.661585194164886,0.98931751764888,0.645857706783622,0.301564624640779,0.596861720015682,0.328281799490123,0,0.18542530201051,0.512612642393558,0,0,0,0.136694227721025,0.457556346413045,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0.165306911450672,0,0,0,1.69107881605257,1.19613236835183,0.827292452285488,1.36115831840833,1.42075805825504,1.18269287843545,1.76035857968631,1.43224823328345,1.46803082195995,1.20792060413003,2.30424005006292,0.316011120628178,0.405450430580328,0.205421914329655,0.25984164595559,0.895133478337407,0.39736270956253,0,0,0.1009664499481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| ||
|EntrezGene=20410 | |||
|HGNC= | |||
|MCL_coexpression_id=2117 | |||
|UniProt=Q8K0M3 | |||
|association_with_transcript=24bp_to_uc007unk.1_5end | |||
|description=CAGE_peak_9_at_Sorbs3_5end | |||
|id=chr14:70605792..70605804,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.90e-08,6;CL:0000126,1.90e-08,6;CL:0000127,1.90e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!1.56e-12!26;UBERON:0000990!1.56e-12!26;UBERON:0003133!1.29e-11!24;UBERON:0000991!3.24e-10!18;UBERON:0005564!3.24e-10!18;UBERON:0004176!8.51e-10!17;UBERON:0009196!8.51e-10!17;UBERON:0009117!8.51e-10!17;UBERON:0004535!3.86e-09!23;UBERON:0001009!3.86e-09!23;UBERON:0001048!6.21e-09!147;UBERON:0004872!1.16e-08!33;UBERON:0000473!3.77e-08!14;UBERON:0007100!1.12e-07!18;UBERON:0000948!1.12e-07!18;UBERON:0005498!1.12e-07!18;UBERON:0004140!1.12e-07!18;UBERON:0009881!1.12e-07!18;UBERON:0004141!1.12e-07!18;UBERON:0003084!1.12e-07!18;UBERON:0007005!1.12e-07!18;UBERON:0004139!1.12e-07!18;UBERON:0004291!1.12e-07!18;UBERON:0003101!2.22e-07!16;UBERON:0000079!2.22e-07!16;UBERON:0003135!3.83e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,8.54e-17,26;UBERON:0000990,8.54e-17,26;UBERON:0004176,2.99e-16,17;UBERON:0009196,2.99e-16,17;UBERON:0009117,2.99e-16,17;UBERON:0003133,3.41e-16,24;UBERON:0000991,3.75e-15,18;UBERON:0005564,3.75e-15,18;UBERON:0000473,2.11e-12,14;UBERON:0003135,2.08e-11,15;UBERON:0003101,1.54e-10,16;UBERON:0000079,1.54e-10,16;UBERON:0002323,9.45e-09,37;UBERON:0004458,9.45e-09,37;UBERON:0000474,1.83e-08,9;UBERON:0003886,2.05e-08,38;UBERON:0002553,4.24e-08,39;UBERON:0000926,4.33e-08,120;UBERON:0004120,4.33e-08,120;UBERON:0006603,4.33e-08,120;UBERON:0001048,6.35e-08,134;UBERON:0003134,5.41e-07,8 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.506884656097573,0.183546752161682,2.34717403304412,0.872100625521786,8.5677611266444,6.02732687130279,2.93971485413261,2.87505128729943,0,0,0,0.771778308107841,5.44413535883638,3.09403255366465,0,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.307213066512487,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0.151452386666368,0.302286240427142,2.89864488701678,0.860423876981386,0,0.539703191637817,0,1.34408066129201,0.702222100658759,0,0,0,1.12674735821344,0,2.54805239706646,0,0,0,0,0.91347103775248,0.776813650941515,0.742210695324124,0,0.304465478312141,0.922461989024234,0.452167921657868,1.76383060703557,1.25666591329675,0.988779870937496,3.32578520915797,0,0.161766849947409,0.662524555381181,0,0,0,0.209446706813455,0,0,0,0,0.449371918214468,1.37250180845588,0,0.521472960576829,0.511430914660661,0.20778804455956,0.324482526135515,1.42575109390443,0.622034853050465,0,0.841767423545896,0.390361328888111,0,0.360124259610698,0.753524089178575,0.612328492361951,0.640568601424249,0.562210347358373,0.517406741478031,0.215567992932842,0,0,0.219195732427575,0,0.348252166522167,1.4404749548556,0.995171334092466,0,0,0,0.828503090142008,0.234526059981096,0.36012412292203,0.710234206755631,0.590292695242212,1.07986979021165,0.930135779001631,1.60964040839772,1.05088808130453,0.493679549740441,0.492502392237286,1.62137619091711,1.60819986167866,0.878200461164203,1.07365135008297,0.210289948564127,0.205809224758569,0,0.264450566663544,0,0,0,0.403367049246685,0,0,0,0,0,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0,0,0,0.203651327845314,0,0.140271639780637,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,5.35046248357617,0,0,0.744281895337007,0.624075346229121,0.252578877947112,0.358794827043824,6.75420929908714,2.03228509183265,0,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,3.12213836572478,0.472905432318573,0.8858587585951,0.478364305972461,1.47476983244164,1.03610989119537,1.73578870297814,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0.163934945376675,1.00988370881749,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0.321321316421807,1.13552068166615,1.42452482933804,1.62886959353576,2.8044920905331,0,0.242780636154981,0,0.565815239267694,1.18120757152309,0.307435147943927,1.29214146584111,0,1.06949213515416,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0.913394847343798,1.40803024838226,1.0591603543191,0.661585194164886,0.98931751764888,0.645857706783622,0.301564624640779,0.596861720015682,0.328281799490123,0,0.18542530201051,0.512612642393558,0,0,0,0.136694227721025,0.457556346413045,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0.165306911450672,0,0,0,1.69107881605257,1.19613236835183,0.827292452285488,1.36115831840833,1.42075805825504,1.18269287843545,1.76035857968631,1.43224823328345,1.46803082195995,1.20792060413003,2.30424005006292,0.316011120628178,0.405450430580328,0.205421914329655,0.25984164595559,0.895133478337407,0.39736270956253,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0.233753804363138,4.0811469050738,0,0,0,0.579568782096571,3.37828455812128,0.915758121336325,0.857473516316263,0.501572104035363,0,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0.505394423527595,0,0,0.468207537349412,0.192075457214608,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0.588795680537589,0.685738504770831,0.532427418478012,0.476872379894642,0.290692833264657,0.470546902076653,0.338458431566706,0,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0.394017929502254,0.409231043169689,0.464810523557898,0.192906610981141,0.749431733813838,0.233931608445408,0.859484216193193,1.14772999241306,0.441182838239031,0.463735671240843 | |||
|short_description=p9@Sorbs3 | |||
}} |
Revision as of 02:59, 13 September 2013
Short description: | p9@Sorbs3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Sorbs3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2117 |
Association with transcript: | 24bp_to_uc007unk.1_5end |
EntrezGene: | Sorbs3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.90e-08 | 6 |
macroglial cell | 1.90e-08 | 6 |
astrocyte | 1.90e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
reproductive structure | 8.54e-17 | 26 |
reproductive system | 8.54e-17 | 26 |
external genitalia | 2.99e-16 | 17 |
indifferent external genitalia | 2.99e-16 | 17 |
indifferent gonad | 2.99e-16 | 17 |
reproductive organ | 3.41e-16 | 24 |
gonad | 3.75e-15 | 18 |
gonad primordium | 3.75e-15 | 18 |
testis | 2.11e-12 | 14 |
male reproductive organ | 2.08e-11 | 15 |
male organism | 1.54e-10 | 16 |
male reproductive system | 1.54e-10 | 16 |
body cavity | 9.45e-09 | 37 |
body cavity or lining | 9.45e-09 | 37 |
female reproductive system | 1.83e-08 | 9 |
body cavity precursor | 2.05e-08 | 38 |
anatomical cavity | 4.24e-08 | 39 |
mesoderm | 4.33e-08 | 120 |
mesoderm-derived structure | 4.33e-08 | 120 |
presumptive mesoderm | 4.33e-08 | 120 |
primordium | 6.35e-08 | 134 |
female reproductive organ | 5.41e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.