FFCP PHASE1:Mm9::chr12:112659739..112659750,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74190|HGNC=|MCL_coexpression_id=24|UniProt=|association_with_transcript=29bp_to_uc011yuw.1_5end|description=CAGE_peak_10_at_1200009I06Rik_5end|id=chr12:112659739..112659750,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,7.10e-11,6;CL:0000677,7.10e-11,6;CL:0000584,7.10e-11,6;CL:0000075,2.45e-09,7;CL:0002563,2.80e-07,9;CL:0002251,2.80e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.81e-14!43;UBERON:0004923!1.03e-12!24;UBERON:0000344!5.45e-12!15;UBERON:0005409!1.16e-10!59;UBERON:0001242!1.57e-09!13;UBERON:0000060!1.57e-09!13;UBERON:0001262!1.57e-09!13;UBERON:0004786!1.57e-09!13;UBERON:0004119!7.22e-07!130;UBERON:0000925!7.22e-07!130;UBERON:0006595!7.22e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.44e-33,31;UBERON:0005409,5.48e-21,47;UBERON:0001242,3.26e-14,13;UBERON:0001262,3.26e-14,13;UBERON:0004786,3.26e-14,13;UBERON:0000344,3.29e-12,15;UBERON:0004923,1.51e-09,24;UBERON:0002108,4.14e-09,4;UBERON:0004119,1.26e-08,118;UBERON:0000925,1.26e-08,118;UBERON:0006595,1.26e-08,118;UBERON:0004921,7.28e-08,114;UBERON:0001007,1.13e-07,116;UBERON:0001555,1.13e-07,116;UBERON:0007026,1.13e-07,116;UBERON:0003350,2.80e-07,9;UBERON:0004808,2.80e-07,9;UBERON:0001277,2.80e-07,9|phase1_expression=0,1.39590163055744,2.27499619694768,4.23449895829562,7.01254021924886,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0.639969691173627,0.91763712426868,4.59385571292016,0.86152399231815,0.646413698057667,1.52018735565099,2.52030129759931,0.221730510655305,5.08024538767705,3.69038872550742,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,1.51633655060205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,1.05780226665418,0,0,0,0,0.22237804384487,1.52180500890047,3.79623249235609,2.14108641141214,1.75934646160189,0.795825888164603,2.33956904542944,0,2.16138049874694,2.78797782556114,0,0,0,0,0,0.140271639780637,0,0,0.156998727841375,0,0,0,0,0,0.405720242777006,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,3.1774810629573,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0.376736914009382,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358855426437903,0.671538465456314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p10@1200009I06Rik}} | ||
|EntrezGene=74190 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt= | |||
|association_with_transcript=29bp_to_uc011yuw.1_5end | |||
|description=CAGE_peak_10_at_1200009I06Rik_5end | |||
|id=chr12:112659739..112659750,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.10e-11,6;CL:0000677,7.10e-11,6;CL:0000584,7.10e-11,6;CL:0000075,2.45e-09,7;CL:0002563,2.80e-07,9;CL:0002251,2.80e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.81e-14!43;UBERON:0004923!1.03e-12!24;UBERON:0000344!5.45e-12!15;UBERON:0005409!1.16e-10!59;UBERON:0001242!1.57e-09!13;UBERON:0000060!1.57e-09!13;UBERON:0001262!1.57e-09!13;UBERON:0004786!1.57e-09!13;UBERON:0004119!7.22e-07!130;UBERON:0000925!7.22e-07!130;UBERON:0006595!7.22e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.44e-33,31;UBERON:0005409,5.48e-21,47;UBERON:0001242,3.26e-14,13;UBERON:0001262,3.26e-14,13;UBERON:0004786,3.26e-14,13;UBERON:0000344,3.29e-12,15;UBERON:0004923,1.51e-09,24;UBERON:0002108,4.14e-09,4;UBERON:0004119,1.26e-08,118;UBERON:0000925,1.26e-08,118;UBERON:0006595,1.26e-08,118;UBERON:0004921,7.28e-08,114;UBERON:0001007,1.13e-07,116;UBERON:0001555,1.13e-07,116;UBERON:0007026,1.13e-07,116;UBERON:0003350,2.80e-07,9;UBERON:0004808,2.80e-07,9;UBERON:0001277,2.80e-07,9 | |||
|phase1_expression=0,1.39590163055744,2.27499619694768,4.23449895829562,7.01254021924886,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0.639969691173627,0.91763712426868,4.59385571292016,0.86152399231815,0.646413698057667,1.52018735565099,2.52030129759931,0.221730510655305,5.08024538767705,3.69038872550742,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,1.51633655060205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,1.05780226665418,0,0,0,0,0.22237804384487,1.52180500890047,3.79623249235609,2.14108641141214,1.75934646160189,0.795825888164603,2.33956904542944,0,2.16138049874694,2.78797782556114,0,0,0,0,0,0.140271639780637,0,0,0.156998727841375,0,0,0,0,0,0.405720242777006,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,3.1774810629573,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0.376736914009382,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358855426437903,0.671538465456314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p10@1200009I06Rik | |||
}} |
Revision as of 22:18, 12 September 2013
Short description: | p10@1200009I06Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_1200009I06Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 29bp_to_uc011yuw.1_5end |
EntrezGene: | 1200009I06Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.10e-11 | 6 |
gut absorptive cell | 7.10e-11 | 6 |
enterocyte | 7.10e-11 | 6 |
columnar/cuboidal epithelial cell | 2.45e-09 | 7 |
intestinal epithelial cell | 2.80e-07 | 9 |
epithelial cell of alimentary canal | 2.80e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.44e-33 | 31 |
gastrointestinal system | 5.48e-21 | 47 |
intestinal mucosa | 3.26e-14 | 13 |
wall of intestine | 3.26e-14 | 13 |
gastrointestinal system mucosa | 3.26e-14 | 13 |
mucosa | 3.29e-12 | 15 |
organ component layer | 1.51e-09 | 24 |
small intestine | 4.14e-09 | 4 |
endoderm-derived structure | 1.26e-08 | 118 |
endoderm | 1.26e-08 | 118 |
presumptive endoderm | 1.26e-08 | 118 |
subdivision of digestive tract | 7.28e-08 | 114 |
digestive system | 1.13e-07 | 116 |
digestive tract | 1.13e-07 | 116 |
primitive gut | 1.13e-07 | 116 |
epithelium of mucosa | 2.80e-07 | 9 |
gastrointestinal system epithelium | 2.80e-07 | 9 |
intestinal epithelium | 2.80e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.