FFCP PHASE1:Mm9::chr7:149585483..149585519,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:149585483..149585519,+|id=chr7:149585483..149585519,+|ontology_enrichment_celltype=CL:0002194!2.14e-10!4;CL:0000766!2.14e-10!4;CL:0000576!2.14e-10!4;CL:0000235!2.14e-10!4;CL:0002009!2.14e-10!4;CL:0000040!2.14e-10!4;CL:0000559!2.14e-10!4;CL:0000864!1.64e-09!2;CL:0000878!1.64e-09!2;CL:0000129!1.64e-09!2|ontology_enrichment_celltype_v019_2=CL:0000355,5.44e-13,9;CL:0002476,1.76e-07,2|ontology_enrichment_disease=DOID:0060100!4.02e-14!3;DOID:4045!4.02e-14!3;DOID:0050686!2.75e-07!6|ontology_enrichment_disease_v019_2=DOID:0060100,2.80e-37,3;DOID:4045,2.80e-37,3;DOID:0050686,4.31e-19,6|ontology_enrichment_uberon=UBERON:0002204!1.00e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.44e-13,9;UBERON:0002036,5.44e-13,9;UBERON:0002385,5.44e-13,9;UBERON:0000486,5.44e-13,9;UBERON:0007503,5.44e-13,9;UBERON:0001015,5.44e-13,9;UBERON:0002329,5.44e-13,9;UBERON:0003082,5.44e-13,9;UBERON:0003059,5.44e-13,9;UBERON:0007282,5.44e-13,9;UBERON:0004290,5.44e-13,9;UBERON:0009618,5.44e-13,9;UBERON:0000383,9.13e-12,10;UBERON:0007524,9.23e-11,11;UBERON:0003077,9.23e-11,11;UBERON:0007285,9.23e-11,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,5.4693474116666,1.0470474879476,27.0586484494267,10.2456822743767,5.82612423637384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433947175744535,0,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:149585483..149585519,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:149585483..149585519,+ | |||
|id=chr7:149585483..149585519,+ | |||
|ontology_enrichment_celltype=CL:0002194!2.14e-10!4;CL:0000766!2.14e-10!4;CL:0000576!2.14e-10!4;CL:0000235!2.14e-10!4;CL:0002009!2.14e-10!4;CL:0000040!2.14e-10!4;CL:0000559!2.14e-10!4;CL:0000864!1.64e-09!2;CL:0000878!1.64e-09!2;CL:0000129!1.64e-09!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,5.44e-13,9;CL:0002476,1.76e-07,2 | |||
|ontology_enrichment_disease=DOID:0060100!4.02e-14!3;DOID:4045!4.02e-14!3;DOID:0050686!2.75e-07!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.80e-37,3;DOID:4045,2.80e-37,3;DOID:0050686,4.31e-19,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.00e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.44e-13,9;UBERON:0002036,5.44e-13,9;UBERON:0002385,5.44e-13,9;UBERON:0000486,5.44e-13,9;UBERON:0007503,5.44e-13,9;UBERON:0001015,5.44e-13,9;UBERON:0002329,5.44e-13,9;UBERON:0003082,5.44e-13,9;UBERON:0003059,5.44e-13,9;UBERON:0007282,5.44e-13,9;UBERON:0004290,5.44e-13,9;UBERON:0009618,5.44e-13,9;UBERON:0000383,9.13e-12,10;UBERON:0007524,9.23e-11,11;UBERON:0003077,9.23e-11,11;UBERON:0007285,9.23e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,5.4693474116666,1.0470474879476,27.0586484494267,10.2456822743767,5.82612423637384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433947175744535,0,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:149585483..149585519,+ | |||
}} |
Revision as of 12:24, 14 September 2013
Short description: | p@chr7:149585483..149585519, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:149585483..149585519, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 5.44e-13 | 9 |
bone marrow macrophage | 1.76e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 5.44e-13 | 9 |
striated muscle tissue | 5.44e-13 | 9 |
muscle tissue | 5.44e-13 | 9 |
multilaminar epithelium | 5.44e-13 | 9 |
epithelial vesicle | 5.44e-13 | 9 |
musculature | 5.44e-13 | 9 |
somite | 5.44e-13 | 9 |
myotome | 5.44e-13 | 9 |
presomitic mesoderm | 5.44e-13 | 9 |
presumptive segmental plate | 5.44e-13 | 9 |
dermomyotome | 5.44e-13 | 9 |
trunk paraxial mesoderm | 5.44e-13 | 9 |
musculature of body | 9.13e-12 | 10 |
dense mesenchyme tissue | 9.23e-11 | 11 |
paraxial mesoderm | 9.23e-11 | 11 |
presumptive paraxial mesoderm | 9.23e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.80e-37 | 3 |
muscle cancer | 2.80e-37 | 3 |
organ system cancer | 4.31e-19 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.