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FFCP PHASE1:Mm9::chr10:61111335..61111384,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=67895|HGNC=|MCL_coexpression_id=207|UniProt=E9Q5Z3,Q4FK49,Q9D819|association_with_transcript=0bp_to_ENSMUST00000160470,ENSMUST00000170726,NM_026438,uc007fge.1_5end|description=CAGE_peak_1_at_Ppa1_5end|id=chr10:61111335..61111384,+|ontology_enrichment_celltype=CL:0000066!5.08e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,5.08e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.20e-14!43;UBERON:0001007!2.15e-11!128;UBERON:0001555!2.15e-11!128;UBERON:0007026!2.15e-11!128;UBERON:0005409!4.99e-11!59;UBERON:0004119!5.62e-11!130;UBERON:0000925!5.62e-11!130;UBERON:0006595!5.62e-11!130;UBERON:0004921!1.70e-10!126;UBERON:0004185!1.70e-10!126;UBERON:0000344!2.15e-09!15;UBERON:0009854!3.25e-09!23;UBERON:0009856!3.25e-09!23;UBERON:0002107!8.37e-09!22;UBERON:0007499!8.37e-09!22;UBERON:0006925!8.37e-09!22;UBERON:0009497!8.37e-09!22;UBERON:0000015!8.37e-09!22;UBERON:0002423!8.37e-09!22;UBERON:0006235!8.37e-09!22;UBERON:0008835!8.37e-09!22;UBERON:0003894!8.37e-09!22;UBERON:0004161!8.37e-09!22;UBERON:0008836!8.37e-09!22;UBERON:0002365!2.48e-08!25;UBERON:0002330!2.48e-08!25;UBERON:0001242!3.28e-08!13;UBERON:0000060!3.28e-08!13;UBERON:0001262!3.28e-08!13;UBERON:0004786!3.28e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.31e-14,31;UBERON:0005409,7.39e-10,47;UBERON:0001007,9.31e-10,116;UBERON:0001555,9.31e-10,116;UBERON:0007026,9.31e-10,116;UBERON:0000344,2.15e-09,15;UBERON:0004119,2.33e-09,118;UBERON:0000925,2.33e-09,118;UBERON:0006595,2.33e-09,118;UBERON:0009854,3.25e-09,23;UBERON:0009856,3.25e-09,23;UBERON:0004921,6.39e-09,114;UBERON:0002107,8.37e-09,22;UBERON:0007499,8.37e-09,22;UBERON:0006925,8.37e-09,22;UBERON:0009497,8.37e-09,22;UBERON:0000015,8.37e-09,22;UBERON:0002423,8.37e-09,22;UBERON:0006235,8.37e-09,22;UBERON:0008835,8.37e-09,22;UBERON:0003894,8.37e-09,22;UBERON:0004161,8.37e-09,22;UBERON:0008836,8.37e-09,22;UBERON:0002365,2.48e-08,25;UBERON:0002330,2.48e-08,25;UBERON:0001242,3.28e-08,13;UBERON:0001262,3.28e-08,13;UBERON:0004786,3.28e-08,13|phase1_expression=23.2215828301951,592.909217579274,532.349110085757,507.534946572861,495.385876916937,156.127722878058,171.23806555652,20.9179783975354,118.825681496007,121.245424634793,143.99431127765,128.991581095459,13.1824562047028,12.3262767410786,28.9805492779627,21.4623783433216,16.7894850750755,14.5112596064789,10.6949258212476,16.5511964201232,18.7945671233864,25.120610653824,39.4411681599792,384.941769240936,268.867677410723,577.103123935595,426.023614201325,338.505306549532,93.8715692114487,126.771155269245,103.104687454717,71.1234354274787,52.2805069446885,79.2408405077194,119.584570577028,168.561930393511,154.556202690613,1.67412652294763,8.5946887897618,5.75876118371178,1.76469446409304,2.73218193983378,5.82612423637384,19.2622131502633,16.7271936512199,28.4497465850606,9.38869613217647,42.950955806948,54.7018595008835,44.1355870898623,39.8961301632283,44.5632949531412,14.5970867270231,14.5072428402269,24.1987535382574,34.215504992781,20.3438742356517,12.3761302146586,43.4980390848135,52.3701069479313,43.7343668419264,36.2563649313971,44.464739805557,5.39939830368839,5.93319817540185,7.104801149461,11.9840044207362,15.3687322128622,42.4090514341674,51.3022565660425,50.8986406470344,40.2767888009363,40.1980744531937,51.9360988671405,53.4817728281759,63.4260962760914,37.4393995397922,35.1140179734266,38.0944202475484,41.4122943472809,42.9991924931325,30.2129754922921,54.7198678042707,43.3327209724394,34.5324039975591,43.6050306501028,36.020035242173,35.6022941526324,66.8662287132015,25.3164726357731,11.3047150593654,328.68192100689,230.510282126927,248.803171345034,425.603553428223,352.149133258506,150.556418381238,36.4720890317044,34.5515386121815,40.6340510686891,46.3374851065279,15.3991772897181,20.3844191765317,0,246.366804670762,270.84169619288,253.773271397421,157.117018493427,18.6435276225964,28.2040064223167,37.4728305814853,32.273340701087,29.7493991460315,24.8692356911827,12.1116368349776,57.1782990550023,30.404981031328,229.4791794319,35.384422077995,55.4860295319613,56.7562702443211,72.2464127171481,119.290727179598,17.8596286177044,15.2896095973822,261.843481588806,24.8017307727255,35.9941638596045,24.0162729168092,23.666921025962,29.7375391832107,32.2931684930062,26.7689453096106,25.5715457330331,31.3759947284936,24.6606719862992,8.86002465497752,59.4665319516245,48.2700468608319,25.2530227063769,64.6698601524637,53.1073861241322,39.7937306869822,29.5381442958002,15.8525043022594,23.060469651273,23.0506242416933,38.0293954986353,64.4548298869198,35.3628369913822,30.4395444803631,44.9351251476528,28.9169139194622,47.7105468135368,53.7091376024732,24.0831462850377,41.4305780514809,35.7713590889454,26.4272054437901,34.3828782408933,27.4395490177883,31.8709848785996,23.674473558521,18.495837784256,19.9004575624718,14.6496385192757,19.8522317035718,9.69152341647507,16.2914251414346,12.148392341853,14.1059728609789,14.3275987676826,31.3956664866202,24.02294895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|EntrezGene=67895
|HGNC=
|MCL_coexpression_id=207
|UniProt=E9Q5Z3,Q4FK49,Q9D819
|association_with_transcript=0bp_to_ENSMUST00000160470,ENSMUST00000170726,NM_026438,uc007fge.1_5end
|description=CAGE_peak_1_at_Ppa1_5end
|id=chr10:61111335..61111384,+
|ontology_enrichment_celltype=CL:0000066!5.08e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000066,5.08e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!1.20e-14!43;UBERON:0001007!2.15e-11!128;UBERON:0001555!2.15e-11!128;UBERON:0007026!2.15e-11!128;UBERON:0005409!4.99e-11!59;UBERON:0004119!5.62e-11!130;UBERON:0000925!5.62e-11!130;UBERON:0006595!5.62e-11!130;UBERON:0004921!1.70e-10!126;UBERON:0004185!1.70e-10!126;UBERON:0000344!2.15e-09!15;UBERON:0009854!3.25e-09!23;UBERON:0009856!3.25e-09!23;UBERON:0002107!8.37e-09!22;UBERON:0007499!8.37e-09!22;UBERON:0006925!8.37e-09!22;UBERON:0009497!8.37e-09!22;UBERON:0000015!8.37e-09!22;UBERON:0002423!8.37e-09!22;UBERON:0006235!8.37e-09!22;UBERON:0008835!8.37e-09!22;UBERON:0003894!8.37e-09!22;UBERON:0004161!8.37e-09!22;UBERON:0008836!8.37e-09!22;UBERON:0002365!2.48e-08!25;UBERON:0002330!2.48e-08!25;UBERON:0001242!3.28e-08!13;UBERON:0000060!3.28e-08!13;UBERON:0001262!3.28e-08!13;UBERON:0004786!3.28e-08!13
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.31e-14,31;UBERON:0005409,7.39e-10,47;UBERON:0001007,9.31e-10,116;UBERON:0001555,9.31e-10,116;UBERON:0007026,9.31e-10,116;UBERON:0000344,2.15e-09,15;UBERON:0004119,2.33e-09,118;UBERON:0000925,2.33e-09,118;UBERON:0006595,2.33e-09,118;UBERON:0009854,3.25e-09,23;UBERON:0009856,3.25e-09,23;UBERON:0004921,6.39e-09,114;UBERON:0002107,8.37e-09,22;UBERON:0007499,8.37e-09,22;UBERON:0006925,8.37e-09,22;UBERON:0009497,8.37e-09,22;UBERON:0000015,8.37e-09,22;UBERON:0002423,8.37e-09,22;UBERON:0006235,8.37e-09,22;UBERON:0008835,8.37e-09,22;UBERON:0003894,8.37e-09,22;UBERON:0004161,8.37e-09,22;UBERON:0008836,8.37e-09,22;UBERON:0002365,2.48e-08,25;UBERON:0002330,2.48e-08,25;UBERON:0001242,3.28e-08,13;UBERON:0001262,3.28e-08,13;UBERON:0004786,3.28e-08,13
|phase1_expression=23.2215828301951,592.909217579274,532.349110085757,507.534946572861,495.385876916937,156.127722878058,171.23806555652,20.9179783975354,118.825681496007,121.245424634793,143.99431127765,128.991581095459,13.1824562047028,12.3262767410786,28.9805492779627,21.4623783433216,16.7894850750755,14.5112596064789,10.6949258212476,16.5511964201232,18.7945671233864,25.120610653824,39.4411681599792,384.941769240936,268.867677410723,577.103123935595,426.023614201325,338.505306549532,93.8715692114487,126.771155269245,103.104687454717,71.1234354274787,52.2805069446885,79.2408405077194,119.584570577028,168.561930393511,154.556202690613,1.67412652294763,8.5946887897618,5.75876118371178,1.76469446409304,2.73218193983378,5.82612423637384,19.2622131502633,16.7271936512199,28.4497465850606,9.38869613217647,42.950955806948,54.7018595008835,44.1355870898623,39.8961301632283,44.5632949531412,14.5970867270231,14.5072428402269,24.1987535382574,34.215504992781,20.3438742356517,12.3761302146586,43.4980390848135,52.3701069479313,43.7343668419264,36.2563649313971,44.464739805557,5.39939830368839,5.93319817540185,7.104801149461,11.9840044207362,15.3687322128622,42.4090514341674,51.3022565660425,50.8986406470344,40.2767888009363,40.1980744531937,51.9360988671405,53.4817728281759,63.4260962760914,37.4393995397922,35.1140179734266,38.0944202475484,41.4122943472809,42.9991924931325,30.2129754922921,54.7198678042707,43.3327209724394,34.5324039975591,43.6050306501028,36.020035242173,35.6022941526324,66.8662287132015,25.3164726357731,11.3047150593654,328.68192100689,230.510282126927,248.803171345034,425.603553428223,352.149133258506,150.556418381238,36.4720890317044,34.5515386121815,40.6340510686891,46.3374851065279,15.3991772897181,20.3844191765317,0,246.366804670762,270.84169619288,253.773271397421,157.117018493427,18.6435276225964,28.2040064223167,37.4728305814853,32.273340701087,29.7493991460315,24.8692356911827,12.1116368349776,57.1782990550023,30.404981031328,229.4791794319,35.384422077995,55.4860295319613,56.7562702443211,72.2464127171481,119.290727179598,17.8596286177044,15.2896095973822,261.843481588806,24.8017307727255,35.9941638596045,24.0162729168092,23.666921025962,29.7375391832107,32.2931684930062,26.7689453096106,25.5715457330331,31.3759947284936,24.6606719862992,8.86002465497752,59.4665319516245,48.2700468608319,25.2530227063769,64.6698601524637,53.1073861241322,39.7937306869822,29.5381442958002,15.8525043022594,23.060469651273,23.0506242416933,38.0293954986353,64.4548298869198,35.3628369913822,30.4395444803631,44.9351251476528,28.9169139194622,47.7105468135368,53.7091376024732,24.0831462850377,41.4305780514809,35.7713590889454,26.4272054437901,34.3828782408933,27.4395490177883,31.8709848785996,23.674473558521,18.495837784256,19.9004575624718,14.6496385192757,19.8522317035718,9.69152341647507,16.2914251414346,12.148392341853,14.1059728609789,14.3275987676826,31.3956664866202,24.0229489581065,26.0759536219518,23.3593470100976,618.54396174567,583.113499493115,43.0842266081173,40.4091809037163,49.2273702250396,48.2023623849789,46.4770111635779,60.6819747299064,302.275012203854,114.95987039736,74.3952218048798,66.8493746058267,84.419449722579,291.217488403968,254.394484702515,277.005511096825,52.3483406630505,36.7880210603327,24.7957018480777,26.0673699642002,18.0375813065892,12.4140401205864,12.3943612763544,21.4034714570423,28.1027722836061,27.1473760627961,256.135069803297,51.388292560557,56.0193136072629,49.0199404998981,47.0635481621327,55.2295695833035,66.9665990185134,40.8528515180151,81.7161542946178,278.954395799091,207.026217399391,196.862561316638,278.337604418188,386.950841014975,359.871211524956,395.603687517961,11.2699446001629,55.1420008252111,44.326473592231,46.1706633308512,28.1628297946203,13.7355131102289,8.09348379012447,8.58588050574315,9.45810864637146,7.0868700687608,6.69710028361446,16.5501947862895,18.6499780415167,10.8486793936134,3.01582567878545,9.79030230873677,55.0775985781321,26.2139908989496,32.9128709474974,31.7643670664871,47.7050691046125,48.9793598776484,38.8075109881996,27.3307121007647,23.6965737506079,24.3748173911603,19.6062833192507,19.8153571552183,21.8597778904443,26.0107713541068,22.9266911208984,20.5645642509957,20.7232524404072,17.450429159391,11.7278610734575,14.1874305756381,30.5313818181915,41.2727081463468,51.9996517979372,66.577593153832,71.1677561842662,45.8078370436452,58.404794256018,26.5379622518579,30.3022771627013,50.8819180276664,85.389072945749,47.442349894166,23.8307724027652,35.6520966181994,24.0607151835923,22.9340627483804,12.2364761213169,16.7666688545946,16.6194510808142,8.82948352432338,30.9766654644098,21.8187032989735,97.4735519402932,28.3604355059346,16.6308359496783,38.4193331792353,32.1111605368437,31.6791936507968,239.305766873107,27.8137953015765,18.6249260069659,20.0195261924326,24.8160666675414,14.5043711893612,13.6694227721025,17.3871411636957,31.1060526888755,31.0692224158521,25.0141952586007,146.064604556312,37.6439832361551,30.2946006019005,32.5096075873622,28.6450965539822,40.615436856789,46.3933351563783,49.7573803466522,105.22588867758,74.9174545626563,37.9016980983025,11.2738587736838,36.1830041426429,32.7607811105053,16.3338998209,21.0530512268702,15.7129196706424,9.85800804624333,30.3376216686404,37.3299266155531,20.5346502702105,18.7219504067613,30.3370675803051,52.7085559754427,45.7063759383481,44.3030006354281,30.6135649591393,23.6430812189705,23.6785035554339,28.3563892175188,23.4242163879703,18.2896335972,16.5354943624418,17.6398764138952,18.4726735949433,10.1682904897965,40.1312778998924,87.9064375361296,154.935830364565,81.7598081693062,45.3995545975648,19.1436124960206,21.7950432878045,144.913024257449,303.451122941395,32.1908550291728,37.2863441570813,36.6653128601214,40.9010573977977,35.6242910280734,32.4819375877571,31.0510350106631,34.2244114450408,33.9856806738153,32.1011393286128,63.9330061118528,41.0995619603062,44.2200038903207,38.1677545797222,49.6783195428318,38.423293266053,28.4475811586067,36.0561350168065,36.5847898934669,32.8506375292937,33.9662261852921,31.8778516942469,29.7779993754226,27.8509412961181,26.9946704091382,25.719859329286,30.7093463753867,28.5505646286283,31.7306143618546,34.444547311449,33.6011867337707,30.7033144655654,27.8970342238365,32.4122509090093,30.5855486349824,29.5304981541951,33.6587470085902,30.7791562382276,32.8645955506986,29.1793981262024,36.0650455097489,30.240876089298,33.5569455399145,26.3392630016142,42.24654780487,39.9696924700714,42.3416211286189,35.6685949720175,62.3599962544429,74.3393082432767,101.789979837365
|short_description=p1@Ppa1
}}

Revision as of 17:03, 12 September 2013

Short description:p1@Ppa1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ppa1_5end
Coexpression cluster:MCL_coexpression_mm9:207
Association with transcript: 0bp_to_ENSMUST00000160470, ENSMUST00000170726, NM_026438, uc007fge.1_5end
EntrezGene:Ppa1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ppa1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G723.22
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5592.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6532.35
CD326+ enterocyte, pool1.CNhs13542.11848-124I3507.53
CD326+ enterocyte, pool2.CNhs13197.11849-124I4495.39
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7156.13
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8171.24
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E920.92
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7118.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2121.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6143.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1128.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.18
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.33
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A128.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A321.46
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A616.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H225.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I939.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1384.94
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2268.87
GP2+ M cell, pool1.CNhs13228.11845-124H9577.10
GP2+ M cell, pool2.CNhs13231.11846-124I1426.02
GP2+ M cell, pool3.CNhs13240.11847-124I2338.51
Ileum epithelium, pool1.CNhs13199.10252-104B993.87
Ileum epithelium, pool2.CNhs13232.10253-104C1126.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8103.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I371.12
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G652.28
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E979.24
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5119.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6168.56
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7154.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D819.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D916.73
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B328.45
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C242.95
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B854.70
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C344.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C439.90
Mouse Astrocytes, donor3.CNhs12107.11633-122C444.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A214.60
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I914.51
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A124.20
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C134.22
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E120.34
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.38
Mouse Granule cells, donor1.CNhs12131.11713-123C343.50
Mouse Granule cells, donor2.CNhs12357.11731-123E352.37
Mouse Granule cells, donor3.CNhs12108.11636-122C743.73
Mouse Meningeal cells, donor1.CNhs12132.11716-123C636.26
Mouse Meningeal cells, donor3.CNhs12109.11639-122D144.46
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C811.98
Mouse Microglia, donor2.CNhs12634.11736-123E815.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D542.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F551.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D950.90
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F140.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D540.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D251.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F253.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D663.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D337.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F335.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D738.09
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D441.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F443.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D830.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E454.72
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E543.33
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I634.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D643.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F636.02
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E135.60
Mouse Schwann, donor1.CNhs12507.11728-123D966.87
Mouse Schwann, donor2.CNhs12573.11746-123F925.32
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.30
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7328.68
Mouse hepatocyte, donor1.CNhs13078.11714-123C4230.51
Mouse hepatocyte, donor3.CNhs12615.11637-122C8248.80
Mouse hepatocyte, donor6.CNhs13090.11822-124F4425.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F6352.15
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7150.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I736.47
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E334.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I840.63
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G646.34
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1246.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2270.84
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3253.77
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6157.12
accessory axillary lymph node, adult.CNhs10475.1063-29H918.64
adrenal gland, adult.CNhs10508.49-24D728.20
adrenal gland, embryo E14.CNhs11038.406-44C537.47
adrenal gland, embryo E16.CNhs11004.1254-43D632.27
adrenal gland, embryo E17.CNhs11043.1263-45I129.75
adrenal gland, embryo E18.CNhs11026.1262-18F524.87
adrenal gland, neonate N00.CNhs11191.1311-23C112.11
adrenal gland, neonate N25.CNhs11223.1377-27I357.18
amnion, adult pregnant day17.5.CNhs10488.583-22A830.40
aorta, adult.CNhs10498.46-23H1229.48
bone (os femoris), adult.CNhs10483.56-12G235.38
bone (os femoris), neonate N02.CNhs11227.1985-43F555.49
bone (os femoris), neonate N16.CNhs11225.1525-43A656.76
bone (os femoris), neonate N20.CNhs11195.1350-25C372.25
cecum, adult.CNhs10467.37-13H4119.29
cerebellum, adult.CNhs10494.15-8B217.86
cerebellum, neonate N30.CNhs11135.1395-42I215.29
colon, adult.CNhs10468.36-18H7261.84
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C724.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D135.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D424.02
corpora quadrigemina, adult.CNhs10501.16-22A423.67
corpus striatum, adult.CNhs10487.19-21D829.74
corpus striatum, neonate N00.CNhs11226.630-43F132.29
cortex, adult.CNhs10473.12-14D526.77
cortex, neonate N30.CNhs11107.1392-42F225.57
diencephalon, adult.CNhs10482.20-12F231.38
diencephalon, neonate N30.CNhs11201.1388-42B224.66
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.86
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A259.47
epididymis, adult.CNhs10490.58-23B248.27
eyeball, adult.CNhs10484.31-12G425.25
eyeball, embryo E12.CNhs11016.345-16C664.67
eyeball, embryo E14.CNhs10521.399-16E253.11
eyeball, embryo E15.CNhs10593.426-16C939.79
eyeball, embryo E17.CNhs11023.1261-18D429.54
eyeball, neonate N00.CNhs11207.633-15C615.85
eyeball, neonate N01.CNhs11140.1532-43E723.06
eyeball, neonate N02.CNhs11205.1551-44G823.05
eyeball, neonate N16.CNhs11188.777-19A238.03
forelimb, embryo E11.CNhs10596.335-25E264.45
forelimb, embryo E12.CNhs10600.359-14H235.36
forelimb, embryo E13.CNhs10589.384-1E230.44
forelimb, embryo E14.CNhs10577.413-26A844.94
forelimb, embryo E15.CNhs11007.437-20E728.92
forelimb, embryo E17.CNhs10598.1517-43C447.71
forelimb, embryo E18.CNhs11008.1520-43B553.71
gonad, embryo E13.CNhs11044.1564-45I624.08
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C841.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D235.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D526.43
heart, embryo E11.CNhs10586.331-24E934.38
heart, embryo E12.CNhs11015.353-12F527.44
heart, embryo E13.CNhs11013.376-3I931.87
heart, embryo E14.CNhs10597.403-26D423.67
heart, embryo E15.CNhs11017.431-16C818.50
heart, embryo E16.CNhs11021.457-17C619.90
heart, embryo E17.CNhs11025.479-18E514.65
heart, embryo E18.CNhs11030.1283-20G319.85
heart, neonate N00.CNhs11213.639-21E39.69
heart, neonate N03.CNhs11221.1349-25I216.29
heart, neonate N10.CNhs11118.749-24G112.15
heart, neonate N16.CNhs11209.782-15G114.11
heart, neonate N20.CNhs11127.821-26I614.33
heart, neonate N25.CNhs11196.1351-25D331.40
heart, neonate N30.CNhs11202.1390-42D224.02
hippocampus, adult.CNhs10478.13-16E826.08
hippocampus, neonate N00.CNhs11228.627-43G123.36
intestinal mucosa, adult.CNhs10506.860-29I3618.54
intestine, adult.CNhs10496.178-9A3583.11
intestine, embryo E12.CNhs11019.1251-16I543.08
intestine, embryo E13.CNhs11010.381-16D540.41
intestine, embryo E15.CNhs10602.976-16D849.23
intestine, embryo E16.CNhs10585.463-22H448.20
intestine, embryo E17.CNhs10582.482-18D346.48
intestine, embryo E18.CNhs10526.1289-20F760.68
intestine, neonate N00.CNhs11126.644-26D1302.28
intestine, neonate N01.CNhs11192.1322-23E9114.96
intestine, neonate N06.CNhs11102.688-20B874.40
intestine, neonate N07.CNhs11095.720-20F266.85
intestine, neonate N10.CNhs11098.755-23A584.42
intestine, neonate N20.CNhs11187.827-18D1291.22
intestine, neonate N25.CNhs11121.1352-25E3254.39
intestine, neonate N30.CNhs11131.1384-42G1277.01
kidney, embryo E14.CNhs10606.411-4I952.35
kidney, embryo E15.CNhs10997.434-16F836.79
kidney, embryo E16.CNhs10584.464-22A524.80
kidney, embryo E17.CNhs11028.483-18I226.07
kidney, embryo E18.CNhs11001.1288-20C718.04
kidney, neonate N00.CNhs11214.646-21G712.41
kidney, neonate N10.CNhs11206.758-6D512.39
kidney, neonate N20.CNhs11113.832-19I121.40
kidney, neonate N25.CNhs11122.1353-25F328.10
kidney, neonate N30.CNhs11203.1385-42H127.15
liver, adult pregnant day01.CNhs10466.508-5B2256.14
liver, embryo E12.CNhs10601.355-15F851.39
liver, embryo E13.CNhs10524.378-3H656.02
liver, embryo E14.CNhs10594.409-16E149.02
liver, embryo E15.CNhs10520.433-16D747.06
liver, embryo E16.CNhs10523.462-17F555.23
liver, embryo E17.CNhs10510.481-18A366.97
liver, embryo E18.CNhs10579.499-43G440.85
liver, neonate N00.CNhs11117.641-24F481.72
liver, neonate N03.CNhs11123.1345-25G2278.95
liver, neonate N06.CNhs11101.684-20A8207.03
liver, neonate N07.CNhs11103.716-20H2196.86
liver, neonate N10.CNhs11115.751-24B9278.34
liver, neonate N20.CNhs11220.823-25A3386.95
liver, neonate N25.CNhs11198.1368-26H1359.87
liver, neonate N30.CNhs11106.1382-42D1395.60
lung, adult.CNhs10474.28-22B111.27
lung, embryo E12.CNhs10522.354-16G255.14
lung, embryo E14.CNhs10604.404-26F844.33
lung, embryo E15.CNhs11020.432-17C546.17
lung, embryo E16.CNhs10998.458-17B628.16
lung, embryo E17.CNhs10605.480-44A613.74
lung, embryo E18.CNhs10583.1287-20I68.09
lung, neonate N00.CNhs11224.640-42C68.59
lung, neonate N06.CNhs11212.683-20E59.46
lung, neonate N07.CNhs11111.715-19A37.09
lung, neonate N10.CNhs11219.750-23E66.70
lung, neonate N20.CNhs11109.822-18A416.55
lung, neonate N25.CNhs11119.1359-25C718.65
lung, neonate N30.CNhs11133.1394-42H210.85
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.79
mammary gland, adult lactating day02.CNhs10480.595-22B655.08
mammary gland, adult pregnant day19.CNhs10476.588-5H226.21
medulla oblongata, adult.CNhs10477.17-12C232.91
medulla oblongata, neonate N30.CNhs11200.1396-42A331.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C747.71
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C248.98
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E138.81
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E227.33
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E323.70
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D724.37
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.61
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D919.82
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D526.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D622.93
olfactory brain, adult.CNhs10489.18-22I920.56
ovary, adult.CNhs10507.91-2I720.72
ovary, embryo E18.CNhs11040.505-44H717.45
ovary, neonate N00.CNhs11217.1299-22I411.73
oviduct, adult pregnant day01.CNhs10500.988-6G614.19
pancreas, adult.CNhs10486.34-16E430.53
pancreas, embryo E14.CNhs11012.405-44F441.27
pancreas, embryo E15.CNhs11042.1556-45F252.00
pancreas, embryo E16.CNhs11003.460-26E566.58
pancreas, embryo E17.CNhs10599.1558-45G371.17
pancreas, embryo E18.CNhs10580.1535-43I745.81
pancreas, neonate N00.CNhs11105.645-26G958.40
pancreas, neonate N01.CNhs11138.1531-43D726.54
pancreas, neonate N02.CNhs11139.1539-43D830.30
pancreas, neonate N16.CNhs11136.787-43B650.88
pancreas, neonate N25.CNhs11094.1555-45E285.39
pancreas, neonate N30.CNhs11182.1548-44H547.44
pituitary gland, adult.CNhs10493.21-1G823.83
pituitary gland, embryo E12.CNhs11018.346-16E635.65
pituitary gland, embryo E13.CNhs11009.370-44C724.06
pituitary gland, embryo E14.CNhs11037.398-44A522.93
pituitary gland, embryo E15.CNhs10592.427-16B912.24
pituitary gland, embryo E16.CNhs11036.449-43F616.77
pituitary gland, embryo E17.CNhs11039.1265-44F516.62
pituitary gland, neonate N00.CNhs11190.1308-22E98.83
placenta, adult pregnant day10.CNhs10472.539-13I730.98
placenta, adult pregnant day17.CNhs10464.577-18G321.82
prostate, adult.CNhs10470.859-1F897.47
skin, adult.CNhs10492.30-1C328.36
skin, neonate N00.CNhs11124.650-25G416.63
skin, neonate N03.CNhs11215.662-22H338.42
skin, neonate N06.CNhs11097.693-20I532.11
skin, neonate N10.CNhs11108.762-6C431.68
small intestine, neonate N16.CNhs11114.790-21I1239.31
spinal cord, adult.CNhs10505.24-13C927.81
spleen, adult.CNhs10465.25-2G218.62
spleen, embryo E16.CNhs11035.461-43C120.02
spleen, embryo E18.CNhs11011.1271-21F224.82
spleen, neonate N10.CNhs11116.752-24D114.50
spleen, neonate N20.CNhs11112.824-19H113.67
spleen, neonate N25.CNhs11099.1354-25G317.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C631.11
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C931.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D325.01
stomach, adult.CNhs10503.33-1H6146.06
stomach, embryo E12.CNhs10588.356-43E337.64
stomach, embryo E15.CNhs10603.1252-16G830.29
stomach, embryo E16.CNhs11022.459-17D432.51
stomach, embryo E17.CNhs11006.1035-18D528.65
stomach, embryo E18.CNhs10999.1286-20C640.62
stomach, neonate N03.CNhs11193.1340-24B846.39
stomach, neonate N07.CNhs11210.718-18A949.76
stomach, neonate N25.CNhs11104.1355-25E4105.23
stomach, neonate N30.CNhs11134.1386-42I174.92
submandibular gland, adult.CNhs10469.59-29C137.90
testis, adult.CNhs10504.57-7G511.27
testis, embryo E13.CNhs11031.389-23F536.18
testis, embryo E15.CNhs11034.443-27C532.76
testis, embryo E16.CNhs11033.470-26G516.33
testis, embryo E17.CNhs11029.486-18I521.05
testis, embryo E18.CNhs11027.503-18G515.71
testis, neonate N00.CNhs11189.1300-22B79.86
testis, neonate N07.CNhs11222.726-26I430.34
testis, neonate N10.CNhs11204.763-44D937.33
testis, neonate N20.CNhs11110.839-18H320.53
testis, neonate N30.CNhs11130.1391-42E218.72
thymus, adult.CNhs10471.38-12B530.34
thymus, embryo E14.CNhs11041.402-44I452.71
thymus, embryo E15.CNhs11005.430-45I245.71
thymus, embryo E16.CNhs11002.456-26C544.30
thymus, embryo E17.CNhs10581.478-18C130.61
thymus, embryo E18.CNhs10595.1273-19G423.64
thymus, neonate N02.CNhs11181.1541-43F823.68
thymus, neonate N03.CNhs11137.2104-43C728.36
thymus, neonate N06.CNhs11197.681-26C423.42
thymus, neonate N07.CNhs11211.713-19D318.29
thymus, neonate N10.CNhs11194.748-24E416.54
thymus, neonate N20.CNhs11186.820-7A217.64
thymus, neonate N25.CNhs11125.1362-25G718.47
thymus, neonate N30.CNhs11132.1393-42G210.17
tongue, adult.CNhs10499.32-1B440.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H387.91
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7154.94
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G581.76
urinary bladder, adult.CNhs10481.879-12E445.40
uterus, adult pregnant day19.CNhs10497.590-15F519.14
uterus, adult.CNhs10509.92-27E521.80
vagina, adult.CNhs10502.89-27D5144.91
vesicular gland, adult.CNhs10491.51-27F8303.45
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.19
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A237.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A336.67
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D740.90
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A435.62
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A532.48
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A734.22
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A833.99
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A932.10
whole body, embryo E11.CNhs11014.324-5I863.93
whole body, embryo E12.CNhs10587.857-27C941.10
whole body, embryo E13.CNhs10512.372-23H244.22
whole body, embryo E14.5.CNhs10578.420-27D238.17
whole body, embryo E14.CNhs10519.395-14B149.68
whole body, embryo E16.CNhs10514.453-14F238.42
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G528.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G536.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G536.58
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G532.85
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G533.97
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G531.88
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G529.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G527.85
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G526.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G525.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G528.55
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G531.73
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G534.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G533.60
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G530.70
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G527.90
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G532.41
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G530.59
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G529.53
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G533.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G530.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G532.86
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G529.18
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G536.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G530.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G533.56
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G526.34
whole body, embryo E17.5.CNhs10513.490-9F942.25
whole body, embryo E17.CNhs10517.475-3I539.97
whole body, embryo E18.CNhs10516.493-3B342.34
whole body, neonate N00.CNhs10525.657-19C235.67
whole body, neonate N01.CNhs10576.659-23C662.36
whole body, neonate N06.CNhs10515.692-21D174.34
whole body, neonate N10.CNhs10518.761-6B4101.79





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell5.08e-0725

Uber anatomy
Ontology termp-valuen
intestine2.31e-1431
gastrointestinal system7.39e-1047
digestive system9.31e-10116
digestive tract9.31e-10116
primitive gut9.31e-10116
mucosa2.15e-0915
endoderm-derived structure2.33e-09118
endoderm2.33e-09118
presumptive endoderm2.33e-09118
digestive tract diverticulum3.25e-0923
sac3.25e-0923
subdivision of digestive tract6.39e-09114
liver8.37e-0922
epithelial sac8.37e-0922
digestive gland8.37e-0922
epithelium of foregut-midgut junction8.37e-0922
anatomical boundary8.37e-0922
hepatobiliary system8.37e-0922
foregut-midgut junction8.37e-0922
hepatic diverticulum8.37e-0922
liver primordium8.37e-0922
septum transversum8.37e-0922
liver bud8.37e-0922
exocrine gland2.48e-0825
exocrine system2.48e-0825
intestinal mucosa3.28e-0813
wall of intestine3.28e-0813
gastrointestinal system mucosa3.28e-0813







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