FFCP PHASE1:Mm9::chr7:54096887..54096908,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16828|HGNC=|MCL_coexpression_id=3|UniProt=D3YZQ9|association_with_transcript=42bp_to_ENSMUST00000147535_5end|description=CAGE_peak_9_at_Ldha_5end|id=chr7:54096887..54096908,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,1.41e-11,9|ontology_enrichment_disease=DOID:0060100!7.60e-07!3;DOID:4045!7.60e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,3.61e-33,3;DOID:4045,3.61e-33,3;DOID:0050686,5.29e-17,6|ontology_enrichment_uberon=UBERON:0005178!1.85e-14!17;UBERON:0005181!1.85e-14!17;UBERON:0002224!1.85e-14!17;UBERON:0000915!1.85e-14!17;UBERON:0008947!1.85e-14!17;UBERON:0003258!1.85e-14!17;UBERON:0002048!4.32e-10!14;UBERON:0000117!4.32e-10!14;UBERON:0000171!4.32e-10!14;UBERON:0000170!4.32e-10!14;UBERON:0005597!4.32e-10!14;UBERON:0000118!4.32e-10!14;UBERON:0005153!7.91e-10!17;UBERON:0000464!8.42e-08!57;UBERON:0002100!2.01e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.41e-11,9;UBERON:0002036,1.41e-11,9;UBERON:0002385,1.41e-11,9;UBERON:0000486,1.41e-11,9;UBERON:0007503,1.41e-11,9;UBERON:0001015,1.41e-11,9;UBERON:0002329,1.41e-11,9;UBERON:0003082,1.41e-11,9;UBERON:0003059,1.41e-11,9;UBERON:0007282,1.41e-11,9;UBERON:0004290,1.41e-11,9;UBERON:0009618,1.41e-11,9;UBERON:0000383,1.74e-10,10;UBERON:0007524,1.36e-09,11;UBERON:0003077,1.36e-09,11;UBERON:0007285,1.36e-09,11|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,11.7188856606334,10.1573594788094,11.5175223674236,13.5293242247133,16.3930916390027,16.5073520030592,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0.760079596425296,1.01104889002957,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0.238043640886014,0.390267295715598,0.315270288212382,0.44292937929755,0.318909537314974,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377210159511796,0.885905678642318,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.62799699626633,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0.249810577937946,0,0.429742108096597,0,0,0|short_description=p9@Ldha}} | ||
|EntrezGene=16828 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=D3YZQ9 | |||
|association_with_transcript=42bp_to_ENSMUST00000147535_5end | |||
|description=CAGE_peak_9_at_Ldha_5end | |||
|id=chr7:54096887..54096908,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.41e-11,9 | |||
|ontology_enrichment_disease=DOID:0060100!7.60e-07!3;DOID:4045!7.60e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.61e-33,3;DOID:4045,3.61e-33,3;DOID:0050686,5.29e-17,6 | |||
|ontology_enrichment_uberon=UBERON:0005178!1.85e-14!17;UBERON:0005181!1.85e-14!17;UBERON:0002224!1.85e-14!17;UBERON:0000915!1.85e-14!17;UBERON:0008947!1.85e-14!17;UBERON:0003258!1.85e-14!17;UBERON:0002048!4.32e-10!14;UBERON:0000117!4.32e-10!14;UBERON:0000171!4.32e-10!14;UBERON:0000170!4.32e-10!14;UBERON:0005597!4.32e-10!14;UBERON:0000118!4.32e-10!14;UBERON:0005153!7.91e-10!17;UBERON:0000464!8.42e-08!57;UBERON:0002100!2.01e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.41e-11,9;UBERON:0002036,1.41e-11,9;UBERON:0002385,1.41e-11,9;UBERON:0000486,1.41e-11,9;UBERON:0007503,1.41e-11,9;UBERON:0001015,1.41e-11,9;UBERON:0002329,1.41e-11,9;UBERON:0003082,1.41e-11,9;UBERON:0003059,1.41e-11,9;UBERON:0007282,1.41e-11,9;UBERON:0004290,1.41e-11,9;UBERON:0009618,1.41e-11,9;UBERON:0000383,1.74e-10,10;UBERON:0007524,1.36e-09,11;UBERON:0003077,1.36e-09,11;UBERON:0007285,1.36e-09,11 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,11.7188856606334,10.1573594788094,11.5175223674236,13.5293242247133,16.3930916390027,16.5073520030592,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0.760079596425296,1.01104889002957,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0.238043640886014,0.390267295715598,0.315270288212382,0.44292937929755,0.318909537314974,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377210159511796,0.885905678642318,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.62799699626633,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0.249810577937946,0,0.429742108096597,0,0,0 | |||
|short_description=p9@Ldha | |||
}} |
Revision as of 13:51, 14 September 2013
Short description: | p9@Ldha |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Ldha_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 42bp_to_ENSMUST00000147535_5end |
EntrezGene: | Ldha |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.41e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.41e-11 | 9 |
striated muscle tissue | 1.41e-11 | 9 |
muscle tissue | 1.41e-11 | 9 |
multilaminar epithelium | 1.41e-11 | 9 |
epithelial vesicle | 1.41e-11 | 9 |
musculature | 1.41e-11 | 9 |
somite | 1.41e-11 | 9 |
myotome | 1.41e-11 | 9 |
presomitic mesoderm | 1.41e-11 | 9 |
presumptive segmental plate | 1.41e-11 | 9 |
dermomyotome | 1.41e-11 | 9 |
trunk paraxial mesoderm | 1.41e-11 | 9 |
musculature of body | 1.74e-10 | 10 |
dense mesenchyme tissue | 1.36e-09 | 11 |
paraxial mesoderm | 1.36e-09 | 11 |
presumptive paraxial mesoderm | 1.36e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.61e-33 | 3 |
muscle cancer | 3.61e-33 | 3 |
organ system cancer | 5.29e-17 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.