FFCP PHASE1:Mm9::chr15:3413852..3413858,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2137|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:3413852..3413858,-|id=chr15:3413852..3413858,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!5.80e-11!47;UBERON:0005177!2.48e-10!85;UBERON:0000466!7.85e-10!79;UBERON:0002100!8.87e-10!98;UBERON:0009569!3.63e-09!66;UBERON:0003104!6.03e-09!131;UBERON:0009142!6.03e-09!131;UBERON:0000926!7.97e-09!193;UBERON:0004120!7.97e-09!193;UBERON:0006603!7.97e-09!193;UBERON:0000077!5.81e-08!97;UBERON:0002365!6.42e-08!25;UBERON:0002330!6.42e-08!25;UBERON:0004921!1.62e-07!126;UBERON:0004185!1.62e-07!126;UBERON:0004119!1.63e-07!130;UBERON:0000925!1.63e-07!130;UBERON:0006595!1.63e-07!130;UBERON:0001041!2.21e-07!92;UBERON:0001007!3.79e-07!128;UBERON:0001555!3.79e-07!128;UBERON:0007026!3.79e-07!128;UBERON:0000468!6.47e-07!333;UBERON:0002107!9.50e-07!22;UBERON:0007499!9.50e-07!22;UBERON:0006925!9.50e-07!22;UBERON:0009497!9.50e-07!22;UBERON:0000015!9.50e-07!22;UBERON:0002423!9.50e-07!22;UBERON:0006235!9.50e-07!22;UBERON:0008835!9.50e-07!22;UBERON:0003894!9.50e-07!22;UBERON:0004161!9.50e-07!22;UBERON:0008836!9.50e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.64e-11,79;UBERON:0002100,1.21e-10,90;UBERON:0002365,5.21e-08,25;UBERON:0002330,5.21e-08,25;UBERON:0001041,8.96e-08,80;UBERON:0009569,1.69e-07,66;UBERON:0004921,2.75e-07,114;UBERON:0004119,3.29e-07,118;UBERON:0000925,3.29e-07,118;UBERON:0006595,3.29e-07,118;UBERON:0002107,3.92e-07,22;UBERON:0007499,3.92e-07,22;UBERON:0006925,3.92e-07,22;UBERON:0009497,3.92e-07,22;UBERON:0000015,3.92e-07,22;UBERON:0002423,3.92e-07,22;UBERON:0006235,3.92e-07,22;UBERON:0008835,3.92e-07,22;UBERON:0003894,3.92e-07,22;UBERON:0004161,3.92e-07,22;UBERON:0008836,3.92e-07,22;UBERON:0003914,5.62e-07,47;UBERON:0001007,5.96e-07,116;UBERON:0001555,5.96e-07,116;UBERON:0007026,5.96e-07,116|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0.595303031057488,0.0992909512008853,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,1.76255545165808,1.4192770370732,0.734187008646726,0,0,0,0,0,0,0,0,0,1.54355661621568,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0.142371680799103,0,0.227178579999552,0,0.579728977403356,3.44169550792555,0,7.01614149129162,8.4470934268197,3.13618820968135,0.702222100658759,0,0,0,0.14084341977668,2.56652954828636,5.09610479413291,0,0,0.253359865475099,0,1.48439043634778,0.517875767294343,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0,0.352766121407114,0.125666591329675,21.0115722574218,1.59059292611903,0,0.323533699894818,0.441683036920787,1.45462575940567,0,0,0,0.255457055208591,0,0,0,0.449371918214468,0,0,0.173824320192276,0,0.20778804455956,0.486723789203273,0.712875546952214,1.49288364732112,0.505445516867349,0,0,0.229902104433473,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.374806898238915,1.03481348295606,0,1.13463648100692,0,0.43839146485515,1.11218899690239,1.0447564995665,0.411564272815887,1.39323986772945,0,0,0,0.414251545071004,0.938104239924385,0.720248245844059,0.473489471170421,0.787056926989615,0.617068451549513,1.62773761325285,1.07309360559848,0.467061369468678,0.493679549740441,2.13417703302824,0.972825714550269,1.75439984910399,1.3173006917463,0.805238512562231,0,0,0,0.528901133327089,0.639864751605702,3.0190767341857,1.15980715189884,1.81515172161008,1.77902435075896,0.570676878337677,1.42358718463353,1.81168850196412,1.50801125280162,1.79060824837036,1.75467678407208,0.898819408654221,0.432276099749388,0.796565093017469,0,0.799739588268102,2.25415471346161,1.62921062276251,1.93952487167626,0.771494018793504,1.3279672796094,1.18088118383682,1.72698600625512,0.740382983530803,6.22550516883013,0.667380422864376,0.589676985339609,0.449724224769707,0.811440485554012,0.482354319504834,1.52775511068852,0,0.162135226775035,2.19649130550465,21.5652309791032,3.34926852901653,5.92871578917665,6.31447194867779,4.12614051100398,3.37710464954357,1.29327233116623,0.189491411770485,1.30371981153621,2.20668611507745,2.81628297946203,0.670025029767263,1.90434912708811,0.975668239288994,1.89162172927429,2.87904096543407,1.43509291791738,1.80249646187312,1.20879487306127,1.88043776155965,0,0,0.983528546038072,2.48343071674259,0.321101179975584,0,0.327869890753351,1.26235463602186,0,0,0.215423397732799,0,0,0.283076530788832,0,0.584511715822624,0.395287777946524,1.28528526568723,0.851640511249612,0.35613120733451,0,0.494910368917606,2.65490276679926,0.242780636154981,0.906970670894253,1.50884063804718,0,1.84461088766356,1.03371317267288,1.45413491791002,2.85197902707777,4.10847785316561,1.05418608574999,2.06271086496374,0,0.36012218806262,0,0.214337035031592,0,0.535106452806212,0.493647061806363,0,0.469343416127421,1.90648863777438,0.220528398054962,3.13283880588812,0.645857706783622,1.14594557363496,1.67121281604391,1.47726809770555,2.91480836629851,0,0.341741761595705,0.412773735926445,0.370389054739423,0.376736914009382,0.136694227721025,0,0,0.139951452323658,0,1.90934123603023,0.474503990371703,1.42323626988794,1.94409613479242,2.29997125615916,1.9652630737156,3.2367443132357,1.81837602595739,2.09404753587224,0.648074866458964,1.86401793926078,0,0.448549638131936,0,0.388902376688095,0.387479470433193,0.506868376472335,0.58678619322877,0.2604087696879,0.419437377702843,0.241584120826006,0,0,0.405450430580328,0,0,0,0,0,0,0.201932899896295,0,0.201652370273681,0.0974578807397524,0,0,0.226730383615211,0,0.179427713218951,0,0.772758376128762,2.064507229963,0.73260649706906,0.857473516316263,0.501572104035363,0,0.920650473014354,0.572895513439397,0,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0.51776031175182,0.103787347584177,0,0.853668028770671,1.21553358534147,0,0,0.888986911206461,0.206035057238894,0.320919209591815,0.505394423527595,0.760437899670719,0.565879024158229,1.03005658216871,0.576226371643824,0.459483751644906,0.476293691283074,0.463537303779422,0.38581844092741,1.23625770240992,0.294397840268795,1.37147700954166,0.887379030796687,0.953744759789284,0.726732083161643,0.658765662907314,1.09998990259179,1.82927972872773,2.10455769150274,1.62964936615034,1.68342681497322,0.711810108745045,0.985044823755635,0.409231043169689,0.77468420592983,0.385813221962283,0,0.935726433781634,0.644613162144895,0,0.882365676478062,0.695603506861264|short_description=p@chr15:3413852..3413858,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2137 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:3413852..3413858,- | |||
|id=chr15:3413852..3413858,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.80e-11!47;UBERON:0005177!2.48e-10!85;UBERON:0000466!7.85e-10!79;UBERON:0002100!8.87e-10!98;UBERON:0009569!3.63e-09!66;UBERON:0003104!6.03e-09!131;UBERON:0009142!6.03e-09!131;UBERON:0000926!7.97e-09!193;UBERON:0004120!7.97e-09!193;UBERON:0006603!7.97e-09!193;UBERON:0000077!5.81e-08!97;UBERON:0002365!6.42e-08!25;UBERON:0002330!6.42e-08!25;UBERON:0004921!1.62e-07!126;UBERON:0004185!1.62e-07!126;UBERON:0004119!1.63e-07!130;UBERON:0000925!1.63e-07!130;UBERON:0006595!1.63e-07!130;UBERON:0001041!2.21e-07!92;UBERON:0001007!3.79e-07!128;UBERON:0001555!3.79e-07!128;UBERON:0007026!3.79e-07!128;UBERON:0000468!6.47e-07!333;UBERON:0002107!9.50e-07!22;UBERON:0007499!9.50e-07!22;UBERON:0006925!9.50e-07!22;UBERON:0009497!9.50e-07!22;UBERON:0000015!9.50e-07!22;UBERON:0002423!9.50e-07!22;UBERON:0006235!9.50e-07!22;UBERON:0008835!9.50e-07!22;UBERON:0003894!9.50e-07!22;UBERON:0004161!9.50e-07!22;UBERON:0008836!9.50e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.64e-11,79;UBERON:0002100,1.21e-10,90;UBERON:0002365,5.21e-08,25;UBERON:0002330,5.21e-08,25;UBERON:0001041,8.96e-08,80;UBERON:0009569,1.69e-07,66;UBERON:0004921,2.75e-07,114;UBERON:0004119,3.29e-07,118;UBERON:0000925,3.29e-07,118;UBERON:0006595,3.29e-07,118;UBERON:0002107,3.92e-07,22;UBERON:0007499,3.92e-07,22;UBERON:0006925,3.92e-07,22;UBERON:0009497,3.92e-07,22;UBERON:0000015,3.92e-07,22;UBERON:0002423,3.92e-07,22;UBERON:0006235,3.92e-07,22;UBERON:0008835,3.92e-07,22;UBERON:0003894,3.92e-07,22;UBERON:0004161,3.92e-07,22;UBERON:0008836,3.92e-07,22;UBERON:0003914,5.62e-07,47;UBERON:0001007,5.96e-07,116;UBERON:0001555,5.96e-07,116;UBERON:0007026,5.96e-07,116 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0.595303031057488,0.0992909512008853,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,1.76255545165808,1.4192770370732,0.734187008646726,0,0,0,0,0,0,0,0,0,1.54355661621568,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0.142371680799103,0,0.227178579999552,0,0.579728977403356,3.44169550792555,0,7.01614149129162,8.4470934268197,3.13618820968135,0.702222100658759,0,0,0,0.14084341977668,2.56652954828636,5.09610479413291,0,0,0.253359865475099,0,1.48439043634778,0.517875767294343,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0,0.352766121407114,0.125666591329675,21.0115722574218,1.59059292611903,0,0.323533699894818,0.441683036920787,1.45462575940567,0,0,0,0.255457055208591,0,0,0,0.449371918214468,0,0,0.173824320192276,0,0.20778804455956,0.486723789203273,0.712875546952214,1.49288364732112,0.505445516867349,0,0,0.229902104433473,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.374806898238915,1.03481348295606,0,1.13463648100692,0,0.43839146485515,1.11218899690239,1.0447564995665,0.411564272815887,1.39323986772945,0,0,0,0.414251545071004,0.938104239924385,0.720248245844059,0.473489471170421,0.787056926989615,0.617068451549513,1.62773761325285,1.07309360559848,0.467061369468678,0.493679549740441,2.13417703302824,0.972825714550269,1.75439984910399,1.3173006917463,0.805238512562231,0,0,0,0.528901133327089,0.639864751605702,3.0190767341857,1.15980715189884,1.81515172161008,1.77902435075896,0.570676878337677,1.42358718463353,1.81168850196412,1.50801125280162,1.79060824837036,1.75467678407208,0.898819408654221,0.432276099749388,0.796565093017469,0,0.799739588268102,2.25415471346161,1.62921062276251,1.93952487167626,0.771494018793504,1.3279672796094,1.18088118383682,1.72698600625512,0.740382983530803,6.22550516883013,0.667380422864376,0.589676985339609,0.449724224769707,0.811440485554012,0.482354319504834,1.52775511068852,0,0.162135226775035,2.19649130550465,21.5652309791032,3.34926852901653,5.92871578917665,6.31447194867779,4.12614051100398,3.37710464954357,1.29327233116623,0.189491411770485,1.30371981153621,2.20668611507745,2.81628297946203,0.670025029767263,1.90434912708811,0.975668239288994,1.89162172927429,2.87904096543407,1.43509291791738,1.80249646187312,1.20879487306127,1.88043776155965,0,0,0.983528546038072,2.48343071674259,0.321101179975584,0,0.327869890753351,1.26235463602186,0,0,0.215423397732799,0,0,0.283076530788832,0,0.584511715822624,0.395287777946524,1.28528526568723,0.851640511249612,0.35613120733451,0,0.494910368917606,2.65490276679926,0.242780636154981,0.906970670894253,1.50884063804718,0,1.84461088766356,1.03371317267288,1.45413491791002,2.85197902707777,4.10847785316561,1.05418608574999,2.06271086496374,0,0.36012218806262,0,0.214337035031592,0,0.535106452806212,0.493647061806363,0,0.469343416127421,1.90648863777438,0.220528398054962,3.13283880588812,0.645857706783622,1.14594557363496,1.67121281604391,1.47726809770555,2.91480836629851,0,0.341741761595705,0.412773735926445,0.370389054739423,0.376736914009382,0.136694227721025,0,0,0.139951452323658,0,1.90934123603023,0.474503990371703,1.42323626988794,1.94409613479242,2.29997125615916,1.9652630737156,3.2367443132357,1.81837602595739,2.09404753587224,0.648074866458964,1.86401793926078,0,0.448549638131936,0,0.388902376688095,0.387479470433193,0.506868376472335,0.58678619322877,0.2604087696879,0.419437377702843,0.241584120826006,0,0,0.405450430580328,0,0,0,0,0,0,0.201932899896295,0,0.201652370273681,0.0974578807397524,0,0,0.226730383615211,0,0.179427713218951,0,0.772758376128762,2.064507229963,0.73260649706906,0.857473516316263,0.501572104035363,0,0.920650473014354,0.572895513439397,0,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0.51776031175182,0.103787347584177,0,0.853668028770671,1.21553358534147,0,0,0.888986911206461,0.206035057238894,0.320919209591815,0.505394423527595,0.760437899670719,0.565879024158229,1.03005658216871,0.576226371643824,0.459483751644906,0.476293691283074,0.463537303779422,0.38581844092741,1.23625770240992,0.294397840268795,1.37147700954166,0.887379030796687,0.953744759789284,0.726732083161643,0.658765662907314,1.09998990259179,1.82927972872773,2.10455769150274,1.62964936615034,1.68342681497322,0.711810108745045,0.985044823755635,0.409231043169689,0.77468420592983,0.385813221962283,0,0.935726433781634,0.644613162144895,0,0.882365676478062,0.695603506861264 | |||
|short_description=p@chr15:3413852..3413858,- | |||
}} |
Revision as of 10:23, 13 September 2013
Short description: | p@chr15:3413852..3413858, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:3413852..3413858, - |
Coexpression cluster: | MCL_coexpression_mm9:2137 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 7.64e-11 | 79 |
trunk | 1.21e-10 | 90 |
exocrine gland | 5.21e-08 | 25 |
exocrine system | 5.21e-08 | 25 |
foregut | 8.96e-08 | 80 |
subdivision of trunk | 1.69e-07 | 66 |
subdivision of digestive tract | 2.75e-07 | 114 |
endoderm-derived structure | 3.29e-07 | 118 |
endoderm | 3.29e-07 | 118 |
presumptive endoderm | 3.29e-07 | 118 |
liver | 3.92e-07 | 22 |
epithelial sac | 3.92e-07 | 22 |
digestive gland | 3.92e-07 | 22 |
epithelium of foregut-midgut junction | 3.92e-07 | 22 |
anatomical boundary | 3.92e-07 | 22 |
hepatobiliary system | 3.92e-07 | 22 |
foregut-midgut junction | 3.92e-07 | 22 |
hepatic diverticulum | 3.92e-07 | 22 |
liver primordium | 3.92e-07 | 22 |
septum transversum | 3.92e-07 | 22 |
liver bud | 3.92e-07 | 22 |
epithelial tube | 5.62e-07 | 47 |
digestive system | 5.96e-07 | 116 |
digestive tract | 5.96e-07 | 116 |
primitive gut | 5.96e-07 | 116 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.