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FFCP PHASE1:Mm9::chr9:46043372..46043389,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=11814|HGNC=|MCL_coexpression_id=8|UniProt=P33622|association_with_transcript=0bp_to_ENSMUST00000034586,NM_023114,uc009phc.1_5end|description=CAGE_peak_1_at_Apoc3_5end|id=chr9:46043372..46043389,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.78e-12!59;UBERON:0004119!5.05e-12!130;UBERON:0000925!5.05e-12!130;UBERON:0006595!5.05e-12!130;UBERON:0000160!8.62e-12!43;UBERON:0001007!1.13e-11!128;UBERON:0001555!1.13e-11!128;UBERON:0007026!1.13e-11!128;UBERON:0009854!4.04e-11!23;UBERON:0009856!4.04e-11!23;UBERON:0002107!6.17e-11!22;UBERON:0007499!6.17e-11!22;UBERON:0006925!6.17e-11!22;UBERON:0009497!6.17e-11!22;UBERON:0000015!6.17e-11!22;UBERON:0002423!6.17e-11!22;UBERON:0006235!6.17e-11!22;UBERON:0008835!6.17e-11!22;UBERON:0003894!6.17e-11!22;UBERON:0004161!6.17e-11!22;UBERON:0008836!6.17e-11!22;UBERON:0004921!1.01e-10!126;UBERON:0004185!1.01e-10!126;UBERON:0002365!5.94e-10!25;UBERON:0002330!5.94e-10!25;UBERON:0005172!1.23e-08!49;UBERON:0005173!1.23e-08!49;UBERON:0002417!1.23e-08!49;UBERON:0000916!1.23e-08!49;UBERON:0000344!3.47e-08!15;UBERON:0004923!5.36e-07!24;UBERON:0001242!6.14e-07!13;UBERON:0000060!6.14e-07!13;UBERON:0001262!6.14e-07!13;UBERON:0004786!6.14e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.50e-16,31;UBERON:0005409,1.94e-15,47;UBERON:0009854,1.82e-12,23;UBERON:0009856,1.82e-12,23;UBERON:0002107,2.95e-12,22;UBERON:0007499,2.95e-12,22;UBERON:0006925,2.95e-12,22;UBERON:0009497,2.95e-12,22;UBERON:0000015,2.95e-12,22;UBERON:0002423,2.95e-12,22;UBERON:0006235,2.95e-12,22;UBERON:0008835,2.95e-12,22;UBERON:0003894,2.95e-12,22;UBERON:0004161,2.95e-12,22;UBERON:0008836,2.95e-12,22;UBERON:0004119,3.00e-11,118;UBERON:0000925,3.00e-11,118;UBERON:0006595,3.00e-11,118;UBERON:0001007,6.90e-11,116;UBERON:0001555,6.90e-11,116;UBERON:0007026,6.90e-11,116;UBERON:0002365,1.30e-10,25;UBERON:0002330,1.30e-10,25;UBERON:0004921,6.82e-10,114;UBERON:0000344,4.04e-09,15;UBERON:0001242,1.06e-07,13;UBERON:0001262,1.06e-07,13;UBERON:0004786,1.06e-07,13;UBERON:0004923,3.40e-07,24;UBERON:0005172,4.48e-07,49;UBERON:0005173,4.48e-07,49;UBERON:0002417,4.48e-07,49;UBERON:0000916,4.48e-07,49|phase1_expression=0,1499.54732662633,1610.69730743896,951.24994455998,830.485120251044,127.420367381124,196.935456022028,0,0,0,0,0,0,0,1.99865857089398,0,0,0,0,0,8.41928572495591,0,0,2457.64360652952,2918.7742830176,1584.88022095746,1141.51928982155,1055.59356892817,245.510257937635,431.223552019242,247.229519380665,0,0,0,2.59966457776147,31.4183479727551,2.6542016314108,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1314403448383,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.638436690425939,0.153606533256243,0,0,0,0,0,3.36156145108982,1.47314292736834,0,0,0.227178579999552,0,15.0729534124872,9774.41524250855,14506.5084333211,11952.8065852027,14337.3166509828,11676.0287046437,2763.52485493248,0,0,0,0,0,0,0,0,0,0,3664.27488406435,0,33.5479234286504,0.173485326766136,0.913396434936424,4.15107895060905,23.6634545667617,17.8734834846271,48.7586374359141,58.3380123853122,9.25435884287435,0.884610551949874,0.161766849947409,0,0,16.775258509631,0,0,1809.40232204245,0,0,0,0.149790639404823,0,0,0,0,0.62336413367868,0.162241263067758,0.81471491080253,1.49288364732112,2.52722758433675,2.10441855886474,0,0,0,0.90422890701429,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493679549740441,0,0,0.146199987425332,1.3173006917463,2.28150911892632,0.210289948564127,0,4604.05532209624,2434.79636727125,0,0,39.8200455485268,514.898038363393,1404.76210296805,3154.89200907679,2465.17847472374,5481.51061112453,4738.17135630268,4401.31507449434,4489.6329981791,2245.25088281825,2454.46369437703,2070.67095929891,0,0.114248512609729,0,0.203651327845314,0.775809948670503,1.54298803758701,0.569128834118316,2.50937251565324,12.2459007716272,26.9005817349525,12604.5727984914,1.00107063429656,1.17935397067922,1.57403478669398,1.82574109249653,7.23531479257251,43.5410206546228,258.351131430828,295.89678886444,733.078973212178,142.330524462081,558.955703398092,881.506426548634,4650.48230076222,6560.74280990985,8551.79385968705,0,0.37898282354097,0,0.339490171550376,0,0,2.14239276797412,0.780534591431195,0,0,0,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0.983528546038072,3.03530420935206,0.160550589987792,0.117211686592203,0,1.00988370881749,14.8288863125641,0.390438744296638,0.430846795465598,0,4.90157082981267,27.1753469557279,11.7395103485719,4.9683495844923,0.790575555893047,0,1.70328102249922,17.9846259703928,0,0,0,0,3.32555912661226,0,0.590603785761546,3.07435147943927,801.90299370099,1.09060118843252,1.42598951353889,2.52829406348653,0,4.12542172992747,1.36175842301515,0,0.388076051348264,0.214337035031592,0.354680467284547,1.96205699362278,1.81003922662333,1.8267896946876,5.39744928546534,1.48282449604674,0,0.32977250588296,0.161464426695906,0.361877549568935,0,0.328281799490123,3719.00399456027,0,1.02522528478712,0.206386867963223,1.11116716421827,0,0.136694227721025,2.0590035588587,0,0,0,25.7761066864081,0,1.21991680276109,57.4588413171983,35.5450103224597,251.772035999343,20.3645163041079,62.8166263512553,8.89970202745701,1.68499465279331,0,0,0,0,0,0,0,0,2.99470085141085,0,0,0,1.89606672376907,0.202725215290164,0.102710957164827,0,0.358053391334963,0,0.721172697119813,0.886137163047463,0.302899349844443,0.609654453239999,0.403304740547362,1.46186821109629,1.73181314952593,1.28564592399726,0,0,0,0,1.15913756419314,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,2.91728060481953,0.628839487883947,32.5403009956525,128.680855397135,124.239139515053,125.158491740808,118.514992317221,130.795318743364,106.762509224519,91.3941112906052,95.0773513212309,99.4782322311222,96.2113256391809,81.2349124873437,78.1282342878005,105.081904704843,109.663195500126,135.090485439854,116.246653034366,104.673487386874,117.149211805657,106.720037390985,98.2375597622364,116.525118719956,113.38304562971,101.853085384396,97.0776129967887,95.7384596262085,81.5617114069666,87.9846742814832,81.961588987376,76.7768311704943,0.499621155875892,210.070584383977,256.34116747962,1.3390183244819,4.19123696327079,2.78241402744506|short_description=p1@Apoc3}}
|EntrezGene=11814
|HGNC=
|MCL_coexpression_id=8
|UniProt=P33622
|association_with_transcript=0bp_to_ENSMUST00000034586,NM_023114,uc009phc.1_5end
|description=CAGE_peak_1_at_Apoc3_5end
|id=chr9:46043372..46043389,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!1.78e-12!59;UBERON:0004119!5.05e-12!130;UBERON:0000925!5.05e-12!130;UBERON:0006595!5.05e-12!130;UBERON:0000160!8.62e-12!43;UBERON:0001007!1.13e-11!128;UBERON:0001555!1.13e-11!128;UBERON:0007026!1.13e-11!128;UBERON:0009854!4.04e-11!23;UBERON:0009856!4.04e-11!23;UBERON:0002107!6.17e-11!22;UBERON:0007499!6.17e-11!22;UBERON:0006925!6.17e-11!22;UBERON:0009497!6.17e-11!22;UBERON:0000015!6.17e-11!22;UBERON:0002423!6.17e-11!22;UBERON:0006235!6.17e-11!22;UBERON:0008835!6.17e-11!22;UBERON:0003894!6.17e-11!22;UBERON:0004161!6.17e-11!22;UBERON:0008836!6.17e-11!22;UBERON:0004921!1.01e-10!126;UBERON:0004185!1.01e-10!126;UBERON:0002365!5.94e-10!25;UBERON:0002330!5.94e-10!25;UBERON:0005172!1.23e-08!49;UBERON:0005173!1.23e-08!49;UBERON:0002417!1.23e-08!49;UBERON:0000916!1.23e-08!49;UBERON:0000344!3.47e-08!15;UBERON:0004923!5.36e-07!24;UBERON:0001242!6.14e-07!13;UBERON:0000060!6.14e-07!13;UBERON:0001262!6.14e-07!13;UBERON:0004786!6.14e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.50e-16,31;UBERON:0005409,1.94e-15,47;UBERON:0009854,1.82e-12,23;UBERON:0009856,1.82e-12,23;UBERON:0002107,2.95e-12,22;UBERON:0007499,2.95e-12,22;UBERON:0006925,2.95e-12,22;UBERON:0009497,2.95e-12,22;UBERON:0000015,2.95e-12,22;UBERON:0002423,2.95e-12,22;UBERON:0006235,2.95e-12,22;UBERON:0008835,2.95e-12,22;UBERON:0003894,2.95e-12,22;UBERON:0004161,2.95e-12,22;UBERON:0008836,2.95e-12,22;UBERON:0004119,3.00e-11,118;UBERON:0000925,3.00e-11,118;UBERON:0006595,3.00e-11,118;UBERON:0001007,6.90e-11,116;UBERON:0001555,6.90e-11,116;UBERON:0007026,6.90e-11,116;UBERON:0002365,1.30e-10,25;UBERON:0002330,1.30e-10,25;UBERON:0004921,6.82e-10,114;UBERON:0000344,4.04e-09,15;UBERON:0001242,1.06e-07,13;UBERON:0001262,1.06e-07,13;UBERON:0004786,1.06e-07,13;UBERON:0004923,3.40e-07,24;UBERON:0005172,4.48e-07,49;UBERON:0005173,4.48e-07,49;UBERON:0002417,4.48e-07,49;UBERON:0000916,4.48e-07,49
|phase1_expression=0,1499.54732662633,1610.69730743896,951.24994455998,830.485120251044,127.420367381124,196.935456022028,0,0,0,0,0,0,0,1.99865857089398,0,0,0,0,0,8.41928572495591,0,0,2457.64360652952,2918.7742830176,1584.88022095746,1141.51928982155,1055.59356892817,245.510257937635,431.223552019242,247.229519380665,0,0,0,2.59966457776147,31.4183479727551,2.6542016314108,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1314403448383,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.638436690425939,0.153606533256243,0,0,0,0,0,3.36156145108982,1.47314292736834,0,0,0.227178579999552,0,15.0729534124872,9774.41524250855,14506.5084333211,11952.8065852027,14337.3166509828,11676.0287046437,2763.52485493248,0,0,0,0,0,0,0,0,0,0,3664.27488406435,0,33.5479234286504,0.173485326766136,0.913396434936424,4.15107895060905,23.6634545667617,17.8734834846271,48.7586374359141,58.3380123853122,9.25435884287435,0.884610551949874,0.161766849947409,0,0,16.775258509631,0,0,1809.40232204245,0,0,0,0.149790639404823,0,0,0,0,0.62336413367868,0.162241263067758,0.81471491080253,1.49288364732112,2.52722758433675,2.10441855886474,0,0,0,0.90422890701429,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493679549740441,0,0,0.146199987425332,1.3173006917463,2.28150911892632,0.210289948564127,0,4604.05532209624,2434.79636727125,0,0,39.8200455485268,514.898038363393,1404.76210296805,3154.89200907679,2465.17847472374,5481.51061112453,4738.17135630268,4401.31507449434,4489.6329981791,2245.25088281825,2454.46369437703,2070.67095929891,0,0.114248512609729,0,0.203651327845314,0.775809948670503,1.54298803758701,0.569128834118316,2.50937251565324,12.2459007716272,26.9005817349525,12604.5727984914,1.00107063429656,1.17935397067922,1.57403478669398,1.82574109249653,7.23531479257251,43.5410206546228,258.351131430828,295.89678886444,733.078973212178,142.330524462081,558.955703398092,881.506426548634,4650.48230076222,6560.74280990985,8551.79385968705,0,0.37898282354097,0,0.339490171550376,0,0,2.14239276797412,0.780534591431195,0,0,0,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0.983528546038072,3.03530420935206,0.160550589987792,0.117211686592203,0,1.00988370881749,14.8288863125641,0.390438744296638,0.430846795465598,0,4.90157082981267,27.1753469557279,11.7395103485719,4.9683495844923,0.790575555893047,0,1.70328102249922,17.9846259703928,0,0,0,0,3.32555912661226,0,0.590603785761546,3.07435147943927,801.90299370099,1.09060118843252,1.42598951353889,2.52829406348653,0,4.12542172992747,1.36175842301515,0,0.388076051348264,0.214337035031592,0.354680467284547,1.96205699362278,1.81003922662333,1.8267896946876,5.39744928546534,1.48282449604674,0,0.32977250588296,0.161464426695906,0.361877549568935,0,0.328281799490123,3719.00399456027,0,1.02522528478712,0.206386867963223,1.11116716421827,0,0.136694227721025,2.0590035588587,0,0,0,25.7761066864081,0,1.21991680276109,57.4588413171983,35.5450103224597,251.772035999343,20.3645163041079,62.8166263512553,8.89970202745701,1.68499465279331,0,0,0,0,0,0,0,0,2.99470085141085,0,0,0,1.89606672376907,0.202725215290164,0.102710957164827,0,0.358053391334963,0,0.721172697119813,0.886137163047463,0.302899349844443,0.609654453239999,0.403304740547362,1.46186821109629,1.73181314952593,1.28564592399726,0,0,0,0,1.15913756419314,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,2.91728060481953,0.628839487883947,32.5403009956525,128.680855397135,124.239139515053,125.158491740808,118.514992317221,130.795318743364,106.762509224519,91.3941112906052,95.0773513212309,99.4782322311222,96.2113256391809,81.2349124873437,78.1282342878005,105.081904704843,109.663195500126,135.090485439854,116.246653034366,104.673487386874,117.149211805657,106.720037390985,98.2375597622364,116.525118719956,113.38304562971,101.853085384396,97.0776129967887,95.7384596262085,81.5617114069666,87.9846742814832,81.961588987376,76.7768311704943,0.499621155875892,210.070584383977,256.34116747962,1.3390183244819,4.19123696327079,2.78241402744506
|short_description=p1@Apoc3
}}

Revision as of 18:03, 14 September 2013

Short description:p1@Apoc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Apoc3_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_ENSMUST00000034586, NM_023114, uc009phc.1_5end
EntrezGene:Apoc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Apoc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51499.55
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61610.70
CD326+ enterocyte, pool1.CNhs13542.11848-124I3951.25
CD326+ enterocyte, pool2.CNhs13197.11849-124I4830.49
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7127.42
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8196.94
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12457.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22918.77
GP2+ M cell, pool1.CNhs13228.11845-124H91584.88
GP2+ M cell, pool2.CNhs13231.11846-124I11141.52
GP2+ M cell, pool3.CNhs13240.11847-124I21055.59
Ileum epithelium, pool1.CNhs13199.10252-104B9245.51
Ileum epithelium, pool2.CNhs13232.10253-104C1431.22
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8247.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F631.42
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.07
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79774.42
Mouse hepatocyte, donor1.CNhs13078.11714-123C414506.51
Mouse hepatocyte, donor3.CNhs12615.11637-122C811952.81
Mouse hepatocyte, donor6.CNhs13090.11822-124F414337.32
Mouse hepatocyte, donor8.CNhs13091.11824-124F611676.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72763.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63664.27
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D733.55
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F523.66
adrenal gland, neonate N00.CNhs11191.1311-23C117.87
adrenal gland, neonate N25.CNhs11223.1377-27I348.76
amnion, adult pregnant day17.5.CNhs10488.583-22A858.34
aorta, adult.CNhs10498.46-23H19.25
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71809.40
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I34604.06
intestine, adult.CNhs10496.178-9A32434.80
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D839.82
intestine, embryo E16.CNhs10585.463-22H4514.90
intestine, embryo E17.CNhs10582.482-18D31404.76
intestine, embryo E18.CNhs10526.1289-20F73154.89
intestine, neonate N00.CNhs11126.644-26D12465.18
intestine, neonate N01.CNhs11192.1322-23E95481.51
intestine, neonate N06.CNhs11102.688-20B84738.17
intestine, neonate N07.CNhs11095.720-20F24401.32
intestine, neonate N10.CNhs11098.755-23A54489.63
intestine, neonate N20.CNhs11187.827-18D12245.25
intestine, neonate N25.CNhs11121.1352-25E32454.46
intestine, neonate N30.CNhs11131.1384-42G12070.67
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.54
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I12.51
kidney, neonate N25.CNhs11122.1353-25F312.25
kidney, neonate N30.CNhs11203.1385-42H126.90
liver, adult pregnant day01.CNhs10466.508-5B212604.57
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F57.24
liver, embryo E17.CNhs10510.481-18A343.54
liver, embryo E18.CNhs10579.499-43G4258.35
liver, neonate N00.CNhs11117.641-24F4295.90
liver, neonate N03.CNhs11123.1345-25G2733.08
liver, neonate N06.CNhs11101.684-20A8142.33
liver, neonate N07.CNhs11103.716-20H2558.96
liver, neonate N10.CNhs11115.751-24B9881.51
liver, neonate N20.CNhs11220.823-25A34650.48
liver, neonate N25.CNhs11198.1368-26H16560.74
liver, neonate N30.CNhs11106.1382-42D18551.79
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D927.18
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H717.98
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G9801.90
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I13719.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H625.78
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D457.46
stomach, embryo E17.CNhs11006.1035-18D535.55
stomach, embryo E18.CNhs10999.1286-20C6251.77
stomach, neonate N03.CNhs11193.1340-24B820.36
stomach, neonate N07.CNhs11210.718-18A962.82
stomach, neonate N25.CNhs11104.1355-25E48.90
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I42.99
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F232.54
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5128.68
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5124.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5125.16
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5118.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5130.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5106.76
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G591.39
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G595.08
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G599.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G596.21
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G581.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G578.13
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5105.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5109.66
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5135.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5116.25
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5104.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5117.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5106.72
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G598.24
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5116.53
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5113.38
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5101.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G597.08
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G595.74
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G581.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G587.98
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G581.96
whole body, embryo E17.5.CNhs10513.490-9F976.78
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B3210.07
whole body, neonate N00.CNhs10525.657-19C2256.34
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine2.50e-1631
gastrointestinal system1.94e-1547
digestive tract diverticulum1.82e-1223
sac1.82e-1223
liver2.95e-1222
epithelial sac2.95e-1222
digestive gland2.95e-1222
epithelium of foregut-midgut junction2.95e-1222
anatomical boundary2.95e-1222
hepatobiliary system2.95e-1222
foregut-midgut junction2.95e-1222
hepatic diverticulum2.95e-1222
liver primordium2.95e-1222
septum transversum2.95e-1222
liver bud2.95e-1222
endoderm-derived structure3.00e-11118
endoderm3.00e-11118
presumptive endoderm3.00e-11118
digestive system6.90e-11116
digestive tract6.90e-11116
primitive gut6.90e-11116
exocrine gland1.30e-1025
exocrine system1.30e-1025
subdivision of digestive tract6.82e-10114
mucosa4.04e-0915
intestinal mucosa1.06e-0713
wall of intestine1.06e-0713
gastrointestinal system mucosa1.06e-0713
organ component layer3.40e-0724
abdomen element4.48e-0749
abdominal segment element4.48e-0749
abdominal segment of trunk4.48e-0749
abdomen4.48e-0749







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