FFCP PHASE1:Mm9::chr11:107278826..107278846,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:107278826..107278846,+|id=chr11:107278826..107278846,+|ontology_enrichment_celltype=CL:0000624!1.38e-09!8;CL:0000893!1.44e-08!6;CL:0002489!1.44e-08!6;CL:0000898!1.44e-08!6;CL:0000809!1.44e-08!6;CL:0000810!1.44e-08!6;CL:0000895!1.44e-08!6;CL:0000808!1.44e-08!6;CL:0000894!1.44e-08!6;CL:0000806!1.44e-08!6;CL:0000807!1.44e-08!6;CL:0000805!1.44e-08!6;CL:0002425!1.44e-08!6;CL:0002436!1.44e-08!6;CL:0002427!1.44e-08!6;CL:0002428!1.44e-08!6;CL:0002429!1.44e-08!6;CL:0002433!1.44e-08!6;CL:0002431!1.44e-08!6;CL:0002432!1.44e-08!6;CL:0000791!1.70e-08!9;CL:0000789!1.70e-08!9;CL:0002420!1.70e-08!9;CL:0002419!1.70e-08!9;CL:0000790!1.70e-08!9;CL:0000084!6.64e-07!11;CL:0000827!6.64e-07!11|ontology_enrichment_celltype_v019_2=CL:0000355,3.07e-13,9|ontology_enrichment_disease=DOID:0060100!2.09e-11!3;DOID:4045!2.09e-11!3|ontology_enrichment_disease_v019_2=DOID:0060100,4.98e-38,3;DOID:4045,4.98e-38,3;DOID:0050686,1.83e-19,6|ontology_enrichment_uberon=UBERON:0004177!8.61e-09!29;UBERON:0002193!1.96e-08!48;UBERON:0000072!1.06e-07!27;UBERON:0002390!1.26e-07!45;UBERON:0003061!1.26e-07!45;UBERON:0002370!2.70e-07!23;UBERON:0000974!2.70e-07!23;UBERON:0004807!2.70e-07!23;UBERON:0005058!2.70e-07!23;UBERON:0003351!2.70e-07!23;UBERON:0009113!2.70e-07!23;UBERON:0003295!2.70e-07!23;UBERON:0009722!2.70e-07!23;UBERON:0005562!2.70e-07!23;UBERON:0007690!2.70e-07!23;UBERON:0002405!4.02e-07!70;UBERON:0006562!6.05e-07!24;UBERON:0003408!6.05e-07!24;UBERON:0001557!6.05e-07!24;UBERON:0001042!6.05e-07!24;UBERON:0008814!6.05e-07!24;UBERON:0009145!6.05e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.07e-13,9;UBERON:0002036,3.07e-13,9;UBERON:0002385,3.07e-13,9;UBERON:0000486,3.07e-13,9;UBERON:0007503,3.07e-13,9;UBERON:0001015,3.07e-13,9;UBERON:0002329,3.07e-13,9;UBERON:0003082,3.07e-13,9;UBERON:0003059,3.07e-13,9;UBERON:0007282,3.07e-13,9;UBERON:0004290,3.07e-13,9;UBERON:0009618,3.07e-13,9;UBERON:0000383,5.47e-12,10;UBERON:0007524,5.80e-11,11;UBERON:0003077,5.80e-11,11;UBERON:0007285,5.80e-11,11|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0.34243593645101,0.0797721589953364,0.171200729931206,0.437102012094987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5559489221072,9.37602413428561,3.66466620781659,24.7057224973026,4.78131839470912,4.85510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19980546198682,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,0.169978429993855,0.69975726161829,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:107278826..107278846,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:107278826..107278846,+ | |||
|id=chr11:107278826..107278846,+ | |||
|ontology_enrichment_celltype=CL:0000624!1.38e-09!8;CL:0000893!1.44e-08!6;CL:0002489!1.44e-08!6;CL:0000898!1.44e-08!6;CL:0000809!1.44e-08!6;CL:0000810!1.44e-08!6;CL:0000895!1.44e-08!6;CL:0000808!1.44e-08!6;CL:0000894!1.44e-08!6;CL:0000806!1.44e-08!6;CL:0000807!1.44e-08!6;CL:0000805!1.44e-08!6;CL:0002425!1.44e-08!6;CL:0002436!1.44e-08!6;CL:0002427!1.44e-08!6;CL:0002428!1.44e-08!6;CL:0002429!1.44e-08!6;CL:0002433!1.44e-08!6;CL:0002431!1.44e-08!6;CL:0002432!1.44e-08!6;CL:0000791!1.70e-08!9;CL:0000789!1.70e-08!9;CL:0002420!1.70e-08!9;CL:0002419!1.70e-08!9;CL:0000790!1.70e-08!9;CL:0000084!6.64e-07!11;CL:0000827!6.64e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,3.07e-13,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.09e-11!3;DOID:4045!2.09e-11!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.98e-38,3;DOID:4045,4.98e-38,3;DOID:0050686,1.83e-19,6 | |||
|ontology_enrichment_uberon=UBERON:0004177!8.61e-09!29;UBERON:0002193!1.96e-08!48;UBERON:0000072!1.06e-07!27;UBERON:0002390!1.26e-07!45;UBERON:0003061!1.26e-07!45;UBERON:0002370!2.70e-07!23;UBERON:0000974!2.70e-07!23;UBERON:0004807!2.70e-07!23;UBERON:0005058!2.70e-07!23;UBERON:0003351!2.70e-07!23;UBERON:0009113!2.70e-07!23;UBERON:0003295!2.70e-07!23;UBERON:0009722!2.70e-07!23;UBERON:0005562!2.70e-07!23;UBERON:0007690!2.70e-07!23;UBERON:0002405!4.02e-07!70;UBERON:0006562!6.05e-07!24;UBERON:0003408!6.05e-07!24;UBERON:0001557!6.05e-07!24;UBERON:0001042!6.05e-07!24;UBERON:0008814!6.05e-07!24;UBERON:0009145!6.05e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.07e-13,9;UBERON:0002036,3.07e-13,9;UBERON:0002385,3.07e-13,9;UBERON:0000486,3.07e-13,9;UBERON:0007503,3.07e-13,9;UBERON:0001015,3.07e-13,9;UBERON:0002329,3.07e-13,9;UBERON:0003082,3.07e-13,9;UBERON:0003059,3.07e-13,9;UBERON:0007282,3.07e-13,9;UBERON:0004290,3.07e-13,9;UBERON:0009618,3.07e-13,9;UBERON:0000383,5.47e-12,10;UBERON:0007524,5.80e-11,11;UBERON:0003077,5.80e-11,11;UBERON:0007285,5.80e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0.34243593645101,0.0797721589953364,0.171200729931206,0.437102012094987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5559489221072,9.37602413428561,3.66466620781659,24.7057224973026,4.78131839470912,4.85510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19980546198682,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,0.169978429993855,0.69975726161829,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:107278826..107278846,+ | |||
}} |
Revision as of 18:35, 12 September 2013
Short description: | p@chr11:107278826..107278846, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:107278826..107278846, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 3.07e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.07e-13 | 9 |
striated muscle tissue | 3.07e-13 | 9 |
muscle tissue | 3.07e-13 | 9 |
multilaminar epithelium | 3.07e-13 | 9 |
epithelial vesicle | 3.07e-13 | 9 |
musculature | 3.07e-13 | 9 |
somite | 3.07e-13 | 9 |
myotome | 3.07e-13 | 9 |
presomitic mesoderm | 3.07e-13 | 9 |
presumptive segmental plate | 3.07e-13 | 9 |
dermomyotome | 3.07e-13 | 9 |
trunk paraxial mesoderm | 3.07e-13 | 9 |
musculature of body | 5.47e-12 | 10 |
dense mesenchyme tissue | 5.80e-11 | 11 |
paraxial mesoderm | 5.80e-11 | 11 |
presumptive paraxial mesoderm | 5.80e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.98e-38 | 3 |
muscle cancer | 4.98e-38 | 3 |
organ system cancer | 1.83e-19 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.