FFCP PHASE1:Mm9::chr19:32421537..32421549,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:32421537..32421549,-|id=chr19:32421537..32421549,-|ontology_enrichment_celltype=CL:0002563!5.55e-08!9;CL:0002251!5.55e-08!9|ontology_enrichment_celltype_v019_2=CL:0000239,2.08e-09,6;CL:0000677,2.08e-09,6;CL:0000584,2.08e-09,6;CL:0002563,2.24e-09,9;CL:0002251,2.24e-09,9;CL:0000075,4.63e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.51e-27!59;UBERON:0000160!6.04e-26!43;UBERON:0004119!3.48e-18!130;UBERON:0000925!3.48e-18!130;UBERON:0006595!3.48e-18!130;UBERON:0001007!6.33e-18!128;UBERON:0001555!6.33e-18!128;UBERON:0007026!6.33e-18!128;UBERON:0004921!1.63e-16!126;UBERON:0004185!1.63e-16!126;UBERON:0000344!7.13e-14!15;UBERON:0001242!4.16e-12!13;UBERON:0000060!4.16e-12!13;UBERON:0001262!4.16e-12!13;UBERON:0004786!4.16e-12!13;UBERON:0004923!2.37e-09!24;UBERON:0009854!4.07e-08!23;UBERON:0009856!4.07e-08!23;UBERON:0003350!5.55e-08!9;UBERON:0004808!5.55e-08!9;UBERON:0001277!5.55e-08!9;UBERON:0002107!2.60e-07!22;UBERON:0007499!2.60e-07!22;UBERON:0006925!2.60e-07!22;UBERON:0009497!2.60e-07!22;UBERON:0000015!2.60e-07!22;UBERON:0002423!2.60e-07!22;UBERON:0006235!2.60e-07!22;UBERON:0008835!2.60e-07!22;UBERON:0003894!2.60e-07!22;UBERON:0004161!2.60e-07!22;UBERON:0008836!2.60e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.04e-41,31;UBERON:0005409,7.59e-29,47;UBERON:0000344,1.15e-16,15;UBERON:0001242,1.07e-15,13;UBERON:0001262,1.07e-15,13;UBERON:0004786,1.07e-15,13;UBERON:0001007,5.14e-15,116;UBERON:0001555,5.14e-15,116;UBERON:0007026,5.14e-15,116;UBERON:0004119,1.12e-14,118;UBERON:0000925,1.12e-14,118;UBERON:0006595,1.12e-14,118;UBERON:0004921,5.16e-14,114;UBERON:0004923,4.26e-12,24;UBERON:0003350,2.24e-09,9;UBERON:0004808,2.24e-09,9;UBERON:0001277,2.24e-09,9;UBERON:0002108,5.19e-08,4;UBERON:0000485,1.33e-07,11;UBERON:0001155,2.79e-07,2;UBERON:0000059,2.79e-07,2|phase1_expression=0,3.48975407639361,4.54999239389536,4.23449895829562,5.00895729946347,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,0.68822784320151,0,0.86152399231815,0,3.99049180858385,2.52030129759931,0.665191531965914,0,0,0,3.75507105676657,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,2.47194967734374,0,0,0,0,0,1.86391761218122,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,7.93005079161115,2.64450566663544,0,0.232236671860439,0.128867461322093,1.00841762311671,1.33426826306922,1.33157938278791,2.84717436926707,0.988193728344065,1.00534083520108,0.994782360205754,2.14460495831032,1.79763881730844,3.02593269824572,4.38110801159608,0,0,0,0.203651327845314,0.581857461502877,0.0701358198903186,0.316182685621286,0,0.31399745568275,0,0,0,0.196558995113203,0.224862112384854,0,1.4470629585145,1.01850340712568,0.575392274901621,0.324270453550071,0.823684239564244,1.43768206527355,1.11642284300551,0.936113019343682,0.505157755894224,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341908464944,0,0.188605079755898,0.295301892880773,0,1.55056975900933,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.269728692769641,0.330613822901344,0.26175594198403,2.33306951925227,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0.64183841918363,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p@chr19:32421537..32421549,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:32421537..32421549,- | |||
|id=chr19:32421537..32421549,- | |||
|ontology_enrichment_celltype=CL:0002563!5.55e-08!9;CL:0002251!5.55e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.08e-09,6;CL:0000677,2.08e-09,6;CL:0000584,2.08e-09,6;CL:0002563,2.24e-09,9;CL:0002251,2.24e-09,9;CL:0000075,4.63e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.51e-27!59;UBERON:0000160!6.04e-26!43;UBERON:0004119!3.48e-18!130;UBERON:0000925!3.48e-18!130;UBERON:0006595!3.48e-18!130;UBERON:0001007!6.33e-18!128;UBERON:0001555!6.33e-18!128;UBERON:0007026!6.33e-18!128;UBERON:0004921!1.63e-16!126;UBERON:0004185!1.63e-16!126;UBERON:0000344!7.13e-14!15;UBERON:0001242!4.16e-12!13;UBERON:0000060!4.16e-12!13;UBERON:0001262!4.16e-12!13;UBERON:0004786!4.16e-12!13;UBERON:0004923!2.37e-09!24;UBERON:0009854!4.07e-08!23;UBERON:0009856!4.07e-08!23;UBERON:0003350!5.55e-08!9;UBERON:0004808!5.55e-08!9;UBERON:0001277!5.55e-08!9;UBERON:0002107!2.60e-07!22;UBERON:0007499!2.60e-07!22;UBERON:0006925!2.60e-07!22;UBERON:0009497!2.60e-07!22;UBERON:0000015!2.60e-07!22;UBERON:0002423!2.60e-07!22;UBERON:0006235!2.60e-07!22;UBERON:0008835!2.60e-07!22;UBERON:0003894!2.60e-07!22;UBERON:0004161!2.60e-07!22;UBERON:0008836!2.60e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.04e-41,31;UBERON:0005409,7.59e-29,47;UBERON:0000344,1.15e-16,15;UBERON:0001242,1.07e-15,13;UBERON:0001262,1.07e-15,13;UBERON:0004786,1.07e-15,13;UBERON:0001007,5.14e-15,116;UBERON:0001555,5.14e-15,116;UBERON:0007026,5.14e-15,116;UBERON:0004119,1.12e-14,118;UBERON:0000925,1.12e-14,118;UBERON:0006595,1.12e-14,118;UBERON:0004921,5.16e-14,114;UBERON:0004923,4.26e-12,24;UBERON:0003350,2.24e-09,9;UBERON:0004808,2.24e-09,9;UBERON:0001277,2.24e-09,9;UBERON:0002108,5.19e-08,4;UBERON:0000485,1.33e-07,11;UBERON:0001155,2.79e-07,2;UBERON:0000059,2.79e-07,2 | |||
|phase1_expression=0,3.48975407639361,4.54999239389536,4.23449895829562,5.00895729946347,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,0.68822784320151,0,0.86152399231815,0,3.99049180858385,2.52030129759931,0.665191531965914,0,0,0,3.75507105676657,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,2.47194967734374,0,0,0,0,0,1.86391761218122,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,7.93005079161115,2.64450566663544,0,0.232236671860439,0.128867461322093,1.00841762311671,1.33426826306922,1.33157938278791,2.84717436926707,0.988193728344065,1.00534083520108,0.994782360205754,2.14460495831032,1.79763881730844,3.02593269824572,4.38110801159608,0,0,0,0.203651327845314,0.581857461502877,0.0701358198903186,0.316182685621286,0,0.31399745568275,0,0,0,0.196558995113203,0.224862112384854,0,1.4470629585145,1.01850340712568,0.575392274901621,0.324270453550071,0.823684239564244,1.43768206527355,1.11642284300551,0.936113019343682,0.505157755894224,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341908464944,0,0.188605079755898,0.295301892880773,0,1.55056975900933,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.269728692769641,0.330613822901344,0.26175594198403,2.33306951925227,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0.64183841918363,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr19:32421537..32421549,- | |||
}} |
Revision as of 17:22, 13 September 2013
Short description: | p@chr19:32421537..32421549, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:32421537..32421549, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.08e-09 | 6 |
gut absorptive cell | 2.08e-09 | 6 |
enterocyte | 2.08e-09 | 6 |
intestinal epithelial cell | 2.24e-09 | 9 |
epithelial cell of alimentary canal | 2.24e-09 | 9 |
columnar/cuboidal epithelial cell | 4.63e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.04e-41 | 31 |
gastrointestinal system | 7.59e-29 | 47 |
mucosa | 1.15e-16 | 15 |
intestinal mucosa | 1.07e-15 | 13 |
wall of intestine | 1.07e-15 | 13 |
gastrointestinal system mucosa | 1.07e-15 | 13 |
digestive system | 5.14e-15 | 116 |
digestive tract | 5.14e-15 | 116 |
primitive gut | 5.14e-15 | 116 |
endoderm-derived structure | 1.12e-14 | 118 |
endoderm | 1.12e-14 | 118 |
presumptive endoderm | 1.12e-14 | 118 |
subdivision of digestive tract | 5.16e-14 | 114 |
organ component layer | 4.26e-12 | 24 |
epithelium of mucosa | 2.24e-09 | 9 |
gastrointestinal system epithelium | 2.24e-09 | 9 |
intestinal epithelium | 2.24e-09 | 9 |
small intestine | 5.19e-08 | 4 |
simple columnar epithelium | 1.33e-07 | 11 |
colon | 2.79e-07 | 2 |
large intestine | 2.79e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.