FFCP PHASE1:Mm9::chr1:36300977..36301021,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=320011|HGNC=|MCL_coexpression_id=953|UniProt=G3UZU8|association_with_transcript=0bp_to_ENSMUST00000174266_5end|description=CAGE_peak_2_at_Uggt1_5end|id=chr1:36300977..36301021,-|ontology_enrichment_celltype=CL:0000066!3.98e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,3.98e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!8.98e-19!130;UBERON:0000925!8.98e-19!130;UBERON:0006595!8.98e-19!130;UBERON:0001007!1.45e-17!128;UBERON:0001555!1.45e-17!128;UBERON:0007026!1.45e-17!128;UBERON:0005409!4.73e-17!59;UBERON:0004921!7.56e-17!126;UBERON:0004185!7.56e-17!126;UBERON:0000160!1.90e-16!43;UBERON:0002365!5.67e-10!25;UBERON:0002330!5.67e-10!25;UBERON:0002100!7.92e-10!98;UBERON:0005256!1.61e-09!47;UBERON:0002108!4.96e-09!16;UBERON:0003104!8.82e-09!131;UBERON:0009142!8.82e-09!131;UBERON:0009854!1.08e-08!23;UBERON:0009856!1.08e-08!23;UBERON:0002107!3.08e-08!22;UBERON:0007499!3.08e-08!22;UBERON:0006925!3.08e-08!22;UBERON:0009497!3.08e-08!22;UBERON:0000015!3.08e-08!22;UBERON:0002423!3.08e-08!22;UBERON:0006235!3.08e-08!22;UBERON:0008835!3.08e-08!22;UBERON:0003894!3.08e-08!22;UBERON:0004161!3.08e-08!22;UBERON:0008836!3.08e-08!22;UBERON:0000077!3.34e-08!97;UBERON:0001045!1.13e-07!13;UBERON:0005177!3.03e-07!85;UBERON:0001264!3.22e-07!12;UBERON:0003922!3.22e-07!12;UBERON:0002114!3.22e-07!12;UBERON:0003923!3.22e-07!12;UBERON:0003924!3.22e-07!12;UBERON:0003921!3.22e-07!12;UBERON:0001041!8.44e-07!92;UBERON:0000466!8.91e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.17e-13,118;UBERON:0000925,5.17e-13,118;UBERON:0006595,5.17e-13,118;UBERON:0002100,3.05e-12,90;UBERON:0001007,5.31e-12,116;UBERON:0001555,5.31e-12,116;UBERON:0007026,5.31e-12,116;UBERON:0004921,2.10e-11,114;UBERON:0005409,3.85e-11,47;UBERON:0000160,2.03e-10,31;UBERON:0002365,5.67e-10,25;UBERON:0002330,5.67e-10,25;UBERON:0005177,1.57e-09,79;UBERON:0005256,1.79e-09,45;UBERON:0009854,1.08e-08,23;UBERON:0009856,1.08e-08,23;UBERON:0002107,3.08e-08,22;UBERON:0007499,3.08e-08,22;UBERON:0006925,3.08e-08,22;UBERON:0009497,3.08e-08,22;UBERON:0000015,3.08e-08,22;UBERON:0002423,3.08e-08,22;UBERON:0006235,3.08e-08,22;UBERON:0008835,3.08e-08,22;UBERON:0003894,3.08e-08,22;UBERON:0004161,3.08e-08,22;UBERON:0008836,3.08e-08,22;UBERON:0003104,1.19e-07,61;UBERON:0009142,1.19e-07,61;UBERON:0001264,3.22e-07,12|phase1_expression=6.88640042550614,16.7508195666893,13.1949779422965,16.6355316218757,18.5331420080148,28.2037176811975,24.0621019813391,1.16210991097419,2.39340827657833,4.68129052643987,2.73948749160808,3.74929147278081,2.73921167889929,2.79745287740792,6.66219523631325,2.02475267389826,0.699561878128147,3.78554598429885,3.83920414096069,4.66828616977833,6.37824676133023,7.64540324246817,12.27639008953,17.2791816616879,14.4527847072317,16.0784949952206,15.0766698655676,15.513928753384,20.7125527207448,27.2192540140725,31.0422714917427,3.17515336729816,3.69038872550742,0,6.93243887403059,14.9611180822643,8.98345167554424,7.53356935326434,14.8453715459522,9.42342739152837,4.70585190424811,2.73218193983378,5.34061388334269,18.0032449705076,20.2753862439029,32.4877751326176,3.12956537739216,2.61630187656536,3.07560655828261,4.08302788055995,6.99932108126813,0,2.68452169692378,10.8804321301702,4.36921938885203,10.5476368774738,18.3381401560804,7.21940929188419,2.63011399117477,3.70293685490423,5.07065122804943,3.04960078862219,0.889294796111139,3.1496490104849,5.93319817540185,1.4209602298922,2.09720077362883,0.384218305321555,2.07379224616955,2.29510095163874,1.47227472945967,1.99955689082663,1.76694832761291,2.32732518508413,1.82106394934649,1.83843757322004,2.20231761998777,2.29837208553338,2.91852413186863,2.2420668914133,2.28719109006024,3.12548022334056,2.79182999001381,3.37657566019008,3.0559649555362,5.00868595305235,5.69486723196412,4.47358669980721,2.72614295999463,6.8014404096107,5.50742528533188,34.4169550792555,27.19885334831,58.8276478885221,95.5171333648074,35.8421509677868,16.1511083151515,5.62420064507591,3.89679006904303,4.59341446863442,12.8167511996779,17.9657068380045,12.7402619853323,14.2213340630666,12.7729714196616,11.9079136773296,14.1546844604139,18.954524033364,16.8309624370662,6.08612770165782,8.84775166507293,3.34912026143355,9.4552353874984,5.87818298155228,6.82014501387088,5.40366342717605,27.6858363862499,4.48258006451726,16.8076004870476,5.66183974815932,5.74187947997023,6.78825354389311,26.0948465705371,2.92780797011547,1.46612694769419,33.9757883427427,8.2672435909085,11.3981518888747,11.9446013448681,2.99581278809645,1.83000241127451,1.13088916901578,5.56237824615285,4.60287823194595,1.66230435647648,2.43361894601636,3.7680564624617,16.6705340617525,69.4987585692605,6.73413938836717,4.42409506073193,4.82794419310293,5.22180176435513,3.91832526372859,2.65342346690179,2.43416068541215,3.84177070694888,3.62184719034622,4.74249584452253,5.8622884852024,8.2697028357056,6.79506770525482,5.83899223373756,8.358051996532,8.84863186554157,5.57295947091781,18.25754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| ||
|EntrezGene=320011 | |||
|HGNC= | |||
|MCL_coexpression_id=953 | |||
|UniProt=G3UZU8 | |||
|association_with_transcript=0bp_to_ENSMUST00000174266_5end | |||
|description=CAGE_peak_2_at_Uggt1_5end | |||
|id=chr1:36300977..36301021,- | |||
|ontology_enrichment_celltype=CL:0000066!3.98e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.98e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!8.98e-19!130;UBERON:0000925!8.98e-19!130;UBERON:0006595!8.98e-19!130;UBERON:0001007!1.45e-17!128;UBERON:0001555!1.45e-17!128;UBERON:0007026!1.45e-17!128;UBERON:0005409!4.73e-17!59;UBERON:0004921!7.56e-17!126;UBERON:0004185!7.56e-17!126;UBERON:0000160!1.90e-16!43;UBERON:0002365!5.67e-10!25;UBERON:0002330!5.67e-10!25;UBERON:0002100!7.92e-10!98;UBERON:0005256!1.61e-09!47;UBERON:0002108!4.96e-09!16;UBERON:0003104!8.82e-09!131;UBERON:0009142!8.82e-09!131;UBERON:0009854!1.08e-08!23;UBERON:0009856!1.08e-08!23;UBERON:0002107!3.08e-08!22;UBERON:0007499!3.08e-08!22;UBERON:0006925!3.08e-08!22;UBERON:0009497!3.08e-08!22;UBERON:0000015!3.08e-08!22;UBERON:0002423!3.08e-08!22;UBERON:0006235!3.08e-08!22;UBERON:0008835!3.08e-08!22;UBERON:0003894!3.08e-08!22;UBERON:0004161!3.08e-08!22;UBERON:0008836!3.08e-08!22;UBERON:0000077!3.34e-08!97;UBERON:0001045!1.13e-07!13;UBERON:0005177!3.03e-07!85;UBERON:0001264!3.22e-07!12;UBERON:0003922!3.22e-07!12;UBERON:0002114!3.22e-07!12;UBERON:0003923!3.22e-07!12;UBERON:0003924!3.22e-07!12;UBERON:0003921!3.22e-07!12;UBERON:0001041!8.44e-07!92;UBERON:0000466!8.91e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.17e-13,118;UBERON:0000925,5.17e-13,118;UBERON:0006595,5.17e-13,118;UBERON:0002100,3.05e-12,90;UBERON:0001007,5.31e-12,116;UBERON:0001555,5.31e-12,116;UBERON:0007026,5.31e-12,116;UBERON:0004921,2.10e-11,114;UBERON:0005409,3.85e-11,47;UBERON:0000160,2.03e-10,31;UBERON:0002365,5.67e-10,25;UBERON:0002330,5.67e-10,25;UBERON:0005177,1.57e-09,79;UBERON:0005256,1.79e-09,45;UBERON:0009854,1.08e-08,23;UBERON:0009856,1.08e-08,23;UBERON:0002107,3.08e-08,22;UBERON:0007499,3.08e-08,22;UBERON:0006925,3.08e-08,22;UBERON:0009497,3.08e-08,22;UBERON:0000015,3.08e-08,22;UBERON:0002423,3.08e-08,22;UBERON:0006235,3.08e-08,22;UBERON:0008835,3.08e-08,22;UBERON:0003894,3.08e-08,22;UBERON:0004161,3.08e-08,22;UBERON:0008836,3.08e-08,22;UBERON:0003104,1.19e-07,61;UBERON:0009142,1.19e-07,61;UBERON:0001264,3.22e-07,12 | |||
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| |||
|short_description=p2@Uggt1 | |||
}} |
Revision as of 20:16, 13 September 2013
Short description: | p2@Uggt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Uggt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:953 |
Association with transcript: | 0bp_to_ENSMUST00000174266_5end |
EntrezGene: | Uggt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.98e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.17e-13 | 118 |
endoderm | 5.17e-13 | 118 |
presumptive endoderm | 5.17e-13 | 118 |
trunk | 3.05e-12 | 90 |
digestive system | 5.31e-12 | 116 |
digestive tract | 5.31e-12 | 116 |
primitive gut | 5.31e-12 | 116 |
subdivision of digestive tract | 2.10e-11 | 114 |
gastrointestinal system | 3.85e-11 | 47 |
intestine | 2.03e-10 | 31 |
exocrine gland | 5.67e-10 | 25 |
exocrine system | 5.67e-10 | 25 |
trunk region element | 1.57e-09 | 79 |
trunk mesenchyme | 1.79e-09 | 45 |
digestive tract diverticulum | 1.08e-08 | 23 |
sac | 1.08e-08 | 23 |
liver | 3.08e-08 | 22 |
epithelial sac | 3.08e-08 | 22 |
digestive gland | 3.08e-08 | 22 |
epithelium of foregut-midgut junction | 3.08e-08 | 22 |
anatomical boundary | 3.08e-08 | 22 |
hepatobiliary system | 3.08e-08 | 22 |
foregut-midgut junction | 3.08e-08 | 22 |
hepatic diverticulum | 3.08e-08 | 22 |
liver primordium | 3.08e-08 | 22 |
septum transversum | 3.08e-08 | 22 |
liver bud | 3.08e-08 | 22 |
mesenchyme | 1.19e-07 | 61 |
entire embryonic mesenchyme | 1.19e-07 | 61 |
pancreas | 3.22e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.