FFCP PHASE1:Mm9::chr11:117093260..117093293,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=53860|HGNC=|MCL_coexpression_id=144|UniProt=A2A6U3|association_with_transcript=-305bp_to_ENSMUST00000106354_5end|description=CAGE_peak_34_at_Sept9_5end|id=chr11:117093260..117093293,+|ontology_enrichment_celltype=CL:0000333!3.10e-08!10;CL:0000095!3.10e-08!10;CL:0000243!3.10e-08!10;CL:0000123!3.10e-08!10;CL:0000125!3.10e-08!10;CL:0000030!3.10e-08!10;CL:0000339!3.10e-08!10;CL:0002494!3.30e-08!3;CL:0000737!3.30e-08!3;CL:0000746!3.30e-08!3;CL:0000513!3.30e-08!3;CL:0000680!9.29e-07!6;CL:0000183!9.29e-07!6;CL:0000187!9.29e-07!6;CL:0000056!9.29e-07!6|ontology_enrichment_celltype_v019_2=CL:0000708,2.13e-35,2;CL:0000151,5.11e-24,3;CL:0000499,5.11e-24,3;CL:0000327,5.11e-24,3;CL:0002494,5.46e-07,3;CL:0000737,5.46e-07,3;CL:0000746,5.46e-07,3;CL:0000513,5.46e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.62e-08!3;UBERON:0000478!1.62e-08!3;UBERON:0000158!1.62e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0003210,2.13e-35,2;UBERON:0005631,1.74e-24,3;UBERON:0000478,1.74e-24,3;UBERON:0000158,1.74e-24,3;UBERON:0000305,5.15e-19,1;UBERON:0001987,4.13e-10,2;UBERON:0003124,4.13e-10,2;UBERON:0004340,4.13e-10,2;UBERON:0004871,3.18e-07,3|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0.782391344348039,0,0.219686182734472,0.388859798148567,0.979904951377538,0,0,0,0,1.54355661621568,0.85960031981627,0.515672092277442,0,0,0,2.37191172448392,2.66788438833342,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908714319998209,0.529000920747499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461230994512117,0,0,0,10.1349936771093,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,6.56679419677843,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.538283139656854,0.167884616364078,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p34@Sept9}} | ||
|EntrezGene=53860 | |||
|HGNC= | |||
|MCL_coexpression_id=144 | |||
|UniProt=A2A6U3 | |||
|association_with_transcript=-305bp_to_ENSMUST00000106354_5end | |||
|description=CAGE_peak_34_at_Sept9_5end | |||
|id=chr11:117093260..117093293,+ | |||
|ontology_enrichment_celltype=CL:0000333!3.10e-08!10;CL:0000095!3.10e-08!10;CL:0000243!3.10e-08!10;CL:0000123!3.10e-08!10;CL:0000125!3.10e-08!10;CL:0000030!3.10e-08!10;CL:0000339!3.10e-08!10;CL:0002494!3.30e-08!3;CL:0000737!3.30e-08!3;CL:0000746!3.30e-08!3;CL:0000513!3.30e-08!3;CL:0000680!9.29e-07!6;CL:0000183!9.29e-07!6;CL:0000187!9.29e-07!6;CL:0000056!9.29e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,2.13e-35,2;CL:0000151,5.11e-24,3;CL:0000499,5.11e-24,3;CL:0000327,5.11e-24,3;CL:0002494,5.46e-07,3;CL:0000737,5.46e-07,3;CL:0000746,5.46e-07,3;CL:0000513,5.46e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.62e-08!3;UBERON:0000478!1.62e-08!3;UBERON:0000158!1.62e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,2.13e-35,2;UBERON:0005631,1.74e-24,3;UBERON:0000478,1.74e-24,3;UBERON:0000158,1.74e-24,3;UBERON:0000305,5.15e-19,1;UBERON:0001987,4.13e-10,2;UBERON:0003124,4.13e-10,2;UBERON:0004340,4.13e-10,2;UBERON:0004871,3.18e-07,3 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0.782391344348039,0,0.219686182734472,0.388859798148567,0.979904951377538,0,0,0,0,1.54355661621568,0.85960031981627,0.515672092277442,0,0,0,2.37191172448392,2.66788438833342,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908714319998209,0.529000920747499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461230994512117,0,0,0,10.1349936771093,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,6.56679419677843,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.538283139656854,0.167884616364078,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p34@Sept9 | |||
}} |
Revision as of 18:55, 12 September 2013
Short description: | p34@Sept9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_34_at_Sept9_5end |
Coexpression cluster: | MCL_coexpression_mm9:144 |
Association with transcript: | -305bp_to_ENSMUST00000106354_5end |
EntrezGene: | Sept9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 2.13e-35 | 2 |
secretory cell | 5.11e-24 | 3 |
stromal cell | 5.11e-24 | 3 |
extracellular matrix secreting cell | 5.11e-24 | 3 |
cardiocyte | 5.46e-07 | 3 |
striated muscle cell | 5.46e-07 | 3 |
cardiac muscle cell | 5.46e-07 | 3 |
cardiac muscle myoblast | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 2.13e-35 | 2 |
extraembryonic membrane | 1.74e-24 | 3 |
extraembryonic structure | 1.74e-24 | 3 |
membranous layer | 1.74e-24 | 3 |
amnion | 5.15e-19 | 1 |
placenta | 4.13e-10 | 2 |
chorion | 4.13e-10 | 2 |
allantois | 4.13e-10 | 2 |
somatic layer of lateral plate mesoderm | 3.18e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.