FFCP PHASE1:Mm9::chr5:130845117..130845159,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=140904|HGNC=|MCL_coexpression_id=30|UniProt=F8WHE1,Q542R1,Q8CBJ9,Q9JJG7|association_with_transcript=-168bp_to_NM_181045,uc008zum.2_5end|description=CAGE_peak_13_at_Caln1_5end|id=chr5:130845117..130845159,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002369!1.96e-32!7;UBERON:0006858!1.96e-32!7;UBERON:0002342!1.17e-22!10;UBERON:0005062!1.17e-22!10;UBERON:0003064!1.48e-21!14;UBERON:0005157!5.31e-11!27;UBERON:0004733!2.68e-10!6;UBERON:0004732!2.68e-10!6;UBERON:0002028!2.68e-10!6;UBERON:0007277!2.68e-10!6;UBERON:0002346!1.21e-09!71;UBERON:0003075!1.21e-09!71;UBERON:0007284!1.21e-09!71;UBERON:0003076!9.06e-09!12;UBERON:0003057!9.06e-09!12;UBERON:0002037!1.24e-07!4;UBERON:0002680!1.24e-07!4;UBERON:0001895!1.24e-07!4;UBERON:0010092!1.24e-07!4;UBERON:0006215!1.24e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.63e-30,4;UBERON:0002680,5.63e-30,4;UBERON:0001895,5.63e-30,4;UBERON:0010092,5.63e-30,4;UBERON:0006215,5.63e-30,4;UBERON:0004733,1.98e-20,6;UBERON:0004732,1.98e-20,6;UBERON:0002028,1.98e-20,6;UBERON:0007277,1.98e-20,6;UBERON:0003076,8.07e-11,12;UBERON:0003057,8.07e-11,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1875371125186,0.346970653532272,0.304465478312141,0,0.150722640552623,0.23517741427141,0.376999773989026,0,0,0,0,0,0,0,5.27005434620785,7.74952815209784,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p13@Caln1}} | ||
|EntrezGene=140904 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt=F8WHE1,Q542R1,Q8CBJ9,Q9JJG7 | |||
|association_with_transcript=-168bp_to_NM_181045,uc008zum.2_5end | |||
|description=CAGE_peak_13_at_Caln1_5end | |||
|id=chr5:130845117..130845159,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002369!1.96e-32!7;UBERON:0006858!1.96e-32!7;UBERON:0002342!1.17e-22!10;UBERON:0005062!1.17e-22!10;UBERON:0003064!1.48e-21!14;UBERON:0005157!5.31e-11!27;UBERON:0004733!2.68e-10!6;UBERON:0004732!2.68e-10!6;UBERON:0002028!2.68e-10!6;UBERON:0007277!2.68e-10!6;UBERON:0002346!1.21e-09!71;UBERON:0003075!1.21e-09!71;UBERON:0007284!1.21e-09!71;UBERON:0003076!9.06e-09!12;UBERON:0003057!9.06e-09!12;UBERON:0002037!1.24e-07!4;UBERON:0002680!1.24e-07!4;UBERON:0001895!1.24e-07!4;UBERON:0010092!1.24e-07!4;UBERON:0006215!1.24e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.63e-30,4;UBERON:0002680,5.63e-30,4;UBERON:0001895,5.63e-30,4;UBERON:0010092,5.63e-30,4;UBERON:0006215,5.63e-30,4;UBERON:0004733,1.98e-20,6;UBERON:0004732,1.98e-20,6;UBERON:0002028,1.98e-20,6;UBERON:0007277,1.98e-20,6;UBERON:0003076,8.07e-11,12;UBERON:0003057,8.07e-11,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1875371125186,0.346970653532272,0.304465478312141,0,0.150722640552623,0.23517741427141,0.376999773989026,0,0,0,0,0,0,0,5.27005434620785,7.74952815209784,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@Caln1 | |||
}} |
Revision as of 06:33, 14 September 2013
Short description: | p13@Caln1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Caln1_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -168bp_to_NM_181045, uc008zum.2_5end |
EntrezGene: | Caln1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.63e-30 | 4 |
regional part of metencephalon | 5.63e-30 | 4 |
metencephalon | 5.63e-30 | 4 |
future metencephalon | 5.63e-30 | 4 |
rhombic lip | 5.63e-30 | 4 |
segmental subdivision of hindbrain | 1.98e-20 | 6 |
segmental subdivision of nervous system | 1.98e-20 | 6 |
hindbrain | 1.98e-20 | 6 |
presumptive hindbrain | 1.98e-20 | 6 |
posterior neural tube | 8.07e-11 | 12 |
chordal neural plate | 8.07e-11 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.