FFCP PHASE1:Mm9::chr11:114713128..114713182,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70355|HGNC=|UniProt=Q8K3J9|association_with_transcript=0bp_to_ENSMUST00000021071,ENSMUST00000053361_5end|description=CAGE_peak_1_at_Gprc5c_5end|id=chr11:114713128..114713182,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!3.23e-13!49;UBERON:0005173!3.23e-13!49;UBERON:0002417!3.23e-13!49;UBERON:0000916!3.23e-13!49;UBERON:0009569!6.98e-13!66;UBERON:0005177!1.71e-12!85;UBERON:0000466!2.59e-12!79;UBERON:0002365!1.12e-10!25;UBERON:0002330!1.12e-10!25;UBERON:0002113!9.49e-10!14;UBERON:0003918!9.49e-10!14;UBERON:0005095!9.49e-10!14;UBERON:0007687!9.49e-10!14;UBERON:0006554!1.80e-09!16;UBERON:0002107!4.61e-09!22;UBERON:0007499!4.61e-09!22;UBERON:0006925!4.61e-09!22;UBERON:0009497!4.61e-09!22;UBERON:0000015!4.61e-09!22;UBERON:0002423!4.61e-09!22;UBERON:0006235!4.61e-09!22;UBERON:0008835!4.61e-09!22;UBERON:0003894!4.61e-09!22;UBERON:0004161!4.61e-09!22;UBERON:0008836!4.61e-09!22;UBERON:0002100!6.15e-09!98;UBERON:0001008!6.22e-09!17;UBERON:0001048!1.12e-08!147;UBERON:0009854!1.33e-08!23;UBERON:0009856!1.33e-08!23;UBERON:0000468!3.83e-08!333;UBERON:0000926!3.65e-07!193;UBERON:0004120!3.65e-07!193;UBERON:0006603!3.65e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0005177,6.57e-15,79;UBERON:0005172,2.63e-13,49;UBERON:0005173,2.63e-13,49;UBERON:0002417,2.63e-13,49;UBERON:0000916,2.63e-13,49;UBERON:0009569,5.39e-13,66;UBERON:0002365,5.84e-11,25;UBERON:0002330,5.84e-11,25;UBERON:0002100,8.50e-11,90;UBERON:0006554,1.87e-10,18;UBERON:0002113,5.31e-10,14;UBERON:0003918,5.31e-10,14;UBERON:0011143,5.31e-10,14;UBERON:0005095,5.31e-10,14;UBERON:0007687,5.31e-10,14;UBERON:0001008,6.51e-10,19;UBERON:0002107,2.71e-09,22;UBERON:0007499,2.71e-09,22;UBERON:0006925,2.71e-09,22;UBERON:0009497,2.71e-09,22;UBERON:0000015,2.71e-09,22;UBERON:0002423,2.71e-09,22;UBERON:0006235,2.71e-09,22;UBERON:0008835,2.71e-09,22;UBERON:0003894,2.71e-09,22;UBERON:0004161,2.71e-09,22;UBERON:0008836,2.71e-09,22;UBERON:0003104,4.59e-09,61;UBERON:0009142,4.59e-09,61;UBERON:0009854,8.05e-09,23;UBERON:0009856,8.05e-09,23;UBERON:0001048,4.95e-07,134|phase1_expression=3.52327463630547,0.348975407639361,0,0,0,4.70061961353291,2.56973904655078,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0.157731082679119,0.137114433605739,0,10.8004978491859,0,0,1.11994695955385,1.60586496747019,0,0.430761996159075,0.646413698057667,0,0.504060259519861,0.221730510655305,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0.503587271902309,0.608261587317087,0.367093504323363,4.69434806608824,0.218025156380447,5.05278220289285,3.69416808241138,0.419959264876088,0,0,0,0,0,1.14613375975503,1.54701627683233,1.01158230429799,1.05798195854407,2.53532561402472,1.35537812827653,3.55717918444456,0.449949858640699,0,0,2.09720077362883,4.2264013585371,0.725827286159344,1.08004750665353,1.47227472945967,0.285650984403804,1.10434270475807,0.244981598429908,0.0958454710182364,0,0,1.27687338085188,0.307213066512487,0.527545150920775,0.640413505216868,1.04182674111352,1.11673199600552,1.12552522006336,1.98637722109853,0.883885756421003,0.711858403995515,0.931997229126503,0.075726193333184,0.226714680320357,11.3047150593654,16.3480536626463,29.2387673494333,18.3499085156858,25.3412802804591,20.1612099193801,9.83110940922263,0,0,0,3.38024207464033,0,0,0,7.36069539438128,5.57391704045217,6.0662933401774,10.8474685733107,1.55362730188303,1.03909497345377,2.08182392119363,0.913396434936424,3.68984795609694,1.3565037649736,2.58695155698551,1.25666591329675,6.92145909656247,5.49477556295664,0.884610551949874,14.0737159454246,8.17113618303456,8.727754556434,1.86391761218122,12.5895742714965,13.823482649688,1.53274233125155,0.599075622529601,0.599902730993408,0.508280908292259,1.3481157546434,1.37250180845588,0.376963056338593,0.695297280769106,1.02286182932132,0.20778804455956,1.1356888414743,5.90668310331835,15.5508713262616,25.2722758433675,9.6803253707778,4.55421550369463,4.82794419310293,3.06105620669094,4.67184935290717,9.38903688288324,7.81493693737584,8.15205003669641,3.3631438196072,8.191583731448,11.7245769704048,9.67731182901719,7.45265490253754,4.44875598760957,4.87553033131033,4.93877127379064,9.55364480728767,0,0.257347907114715,0.284163499395593,5.17814431338755,3.98694301967864,2.52086886045421,3.31442629819294,2.36117078096885,2.46827380619805,2.55787339225449,2.95100741539581,3.38619492864792,3.29119699826961,3.11918181750281,3.24275238183423,2.19299981137998,3.07370161407471,5.09984391289413,1.26173969138476,0.823236899034275,1.65209391491899,0.264450566663544,7.03851226766272,3.48355007790658,1.9330119198314,2.21851877085677,2.00140239460383,1.33157938278791,0.474529061544512,0.823494773620054,1.00534083520108,0.596869416123452,1.16978452271472,1.79763881730844,0.216138049874694,1.99141273254367,14.9837641752935,16.7945313536301,28.1769339182701,20.3651327845314,21.1408211012712,29.1063652544822,41.1037491307672,33.0646731474309,37.0516997705645,47.8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| ||
|EntrezGene=70355 | |||
|HGNC= | |||
|UniProt=Q8K3J9 | |||
|association_with_transcript=0bp_to_ENSMUST00000021071,ENSMUST00000053361_5end | |||
|description=CAGE_peak_1_at_Gprc5c_5end | |||
|id=chr11:114713128..114713182,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!3.23e-13!49;UBERON:0005173!3.23e-13!49;UBERON:0002417!3.23e-13!49;UBERON:0000916!3.23e-13!49;UBERON:0009569!6.98e-13!66;UBERON:0005177!1.71e-12!85;UBERON:0000466!2.59e-12!79;UBERON:0002365!1.12e-10!25;UBERON:0002330!1.12e-10!25;UBERON:0002113!9.49e-10!14;UBERON:0003918!9.49e-10!14;UBERON:0005095!9.49e-10!14;UBERON:0007687!9.49e-10!14;UBERON:0006554!1.80e-09!16;UBERON:0002107!4.61e-09!22;UBERON:0007499!4.61e-09!22;UBERON:0006925!4.61e-09!22;UBERON:0009497!4.61e-09!22;UBERON:0000015!4.61e-09!22;UBERON:0002423!4.61e-09!22;UBERON:0006235!4.61e-09!22;UBERON:0008835!4.61e-09!22;UBERON:0003894!4.61e-09!22;UBERON:0004161!4.61e-09!22;UBERON:0008836!4.61e-09!22;UBERON:0002100!6.15e-09!98;UBERON:0001008!6.22e-09!17;UBERON:0001048!1.12e-08!147;UBERON:0009854!1.33e-08!23;UBERON:0009856!1.33e-08!23;UBERON:0000468!3.83e-08!333;UBERON:0000926!3.65e-07!193;UBERON:0004120!3.65e-07!193;UBERON:0006603!3.65e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,6.57e-15,79;UBERON:0005172,2.63e-13,49;UBERON:0005173,2.63e-13,49;UBERON:0002417,2.63e-13,49;UBERON:0000916,2.63e-13,49;UBERON:0009569,5.39e-13,66;UBERON:0002365,5.84e-11,25;UBERON:0002330,5.84e-11,25;UBERON:0002100,8.50e-11,90;UBERON:0006554,1.87e-10,18;UBERON:0002113,5.31e-10,14;UBERON:0003918,5.31e-10,14;UBERON:0011143,5.31e-10,14;UBERON:0005095,5.31e-10,14;UBERON:0007687,5.31e-10,14;UBERON:0001008,6.51e-10,19;UBERON:0002107,2.71e-09,22;UBERON:0007499,2.71e-09,22;UBERON:0006925,2.71e-09,22;UBERON:0009497,2.71e-09,22;UBERON:0000015,2.71e-09,22;UBERON:0002423,2.71e-09,22;UBERON:0006235,2.71e-09,22;UBERON:0008835,2.71e-09,22;UBERON:0003894,2.71e-09,22;UBERON:0004161,2.71e-09,22;UBERON:0008836,2.71e-09,22;UBERON:0003104,4.59e-09,61;UBERON:0009142,4.59e-09,61;UBERON:0009854,8.05e-09,23;UBERON:0009856,8.05e-09,23;UBERON:0001048,4.95e-07,134 | |||
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| |||
|short_description=p1@Gprc5c | |||
}} | |||
Revision as of 18:43, 12 September 2013
| Short description: | p1@Gprc5c |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Gprc5c_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000021071, ENSMUST00000053361_5end |
| EntrezGene: | Gprc5c |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| trunk region element | 6.57e-15 | 79 |
| abdomen element | 2.63e-13 | 49 |
| abdominal segment element | 2.63e-13 | 49 |
| abdominal segment of trunk | 2.63e-13 | 49 |
| abdomen | 2.63e-13 | 49 |
| subdivision of trunk | 5.39e-13 | 66 |
| exocrine gland | 5.84e-11 | 25 |
| exocrine system | 5.84e-11 | 25 |
| trunk | 8.50e-11 | 90 |
| urinary system structure | 1.87e-10 | 18 |
| kidney | 5.31e-10 | 14 |
| kidney mesenchyme | 5.31e-10 | 14 |
| upper urinary tract | 5.31e-10 | 14 |
| kidney rudiment | 5.31e-10 | 14 |
| kidney field | 5.31e-10 | 14 |
| renal system | 6.51e-10 | 19 |
| liver | 2.71e-09 | 22 |
| epithelial sac | 2.71e-09 | 22 |
| digestive gland | 2.71e-09 | 22 |
| epithelium of foregut-midgut junction | 2.71e-09 | 22 |
| anatomical boundary | 2.71e-09 | 22 |
| hepatobiliary system | 2.71e-09 | 22 |
| foregut-midgut junction | 2.71e-09 | 22 |
| hepatic diverticulum | 2.71e-09 | 22 |
| liver primordium | 2.71e-09 | 22 |
| septum transversum | 2.71e-09 | 22 |
| liver bud | 2.71e-09 | 22 |
| mesenchyme | 4.59e-09 | 61 |
| entire embryonic mesenchyme | 4.59e-09 | 61 |
| digestive tract diverticulum | 8.05e-09 | 23 |
| sac | 8.05e-09 | 23 |
| primordium | 4.95e-07 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
