FFCP PHASE1:Mm9::chr7:130513816..130513835,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=386|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:130513816..130513835,+|id=chr7:130513816..130513835,+|ontology_enrichment_celltype=CL:0000066!5.93e-08!25;CL:0000075!6.29e-08!7;CL:0002563!7.57e-08!9;CL:0002251!7.57e-08!9;CL:0000239!3.58e-07!6;CL:0000677!3.58e-07!6;CL:0000212!3.58e-07!6;CL:0000584!3.58e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,3.61e-27,9;CL:0002251,3.61e-27,9;CL:0000239,6.35e-19,6;CL:0000677,6.35e-19,6;CL:0000584,6.35e-19,6;CL:0000075,2.87e-16,7;CL:0002076,3.09e-16,15;CL:0000223,4.05e-12,20;CL:0002250,8.39e-10,3;CL:0000066,1.22e-09,25;CL:0000355,2.53e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,8.52e-21,3;DOID:4045,8.52e-21,3;DOID:0050686,1.02e-10,6|ontology_enrichment_uberon=UBERON:0003350!7.57e-08!9;UBERON:0004808!7.57e-08!9;UBERON:0001277!7.57e-08!9;UBERON:0000485!1.48e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.61e-27,9;UBERON:0004808,3.61e-27,9;UBERON:0001277,3.61e-27,9;UBERON:0000485,3.31e-22,11;UBERON:0001242,9.16e-19,13;UBERON:0001262,9.16e-19,13;UBERON:0004786,9.16e-19,13;UBERON:0000344,3.09e-16,15;UBERON:0004923,4.72e-10,24;UBERON:0000160,1.04e-07,31;UBERON:0000490,1.62e-07,66;UBERON:0001134,2.53e-07,9;UBERON:0002036,2.53e-07,9;UBERON:0002385,2.53e-07,9;UBERON:0000486,2.53e-07,9;UBERON:0007503,2.53e-07,9;UBERON:0001015,2.53e-07,9;UBERON:0002329,2.53e-07,9;UBERON:0003082,2.53e-07,9;UBERON:0003059,2.53e-07,9;UBERON:0007282,2.53e-07,9;UBERON:0004290,2.53e-07,9;UBERON:0009618,2.53e-07,9|phase1_expression=0,4.18770489167233,1.81999695755814,7.56160528267075,10.5188103288733,0.671517087647559,0.233612640595526,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0.86152399231815,0.430942465371778,0,0,0,0.635030673459631,0,0,2.02196133825892,0,1.42918549383658,4.18531630736908,1.5626706890476,1.57057123192139,22.3527965451785,2.04913645487534,1.45653105909346,0.125896817975577,0.101376931219515,0,0,0,0.219686182734472,0,0,0,0.167782606057736,0,0,0.257259436035947,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0.182975287204819,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0.579728977403356,0,0,0,0.649776417447669,0,0,0,0.259786004602869,0,0.422530259330042,0,0,0,0,0.253359865475099,0.505524445014783,0,0.258937883647172,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0.494389935468748,0,0.884610551949874,0.485300549842228,0.220841518460394,0,0,0,0,0,0,0,0.254140454146129,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0,0.189491411770485,0.162964976442026,0,0,0,0,0.390267295715598,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0.163934945376675,0.757412781613119,0,0.390438744296638,0,0.238968797952552,0.445597348164788,0,0.809621403349789,0,0,0,0,0,0,0,1.32745138339963,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0.276399947608848,0,0,0,0,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0.221985953374065,0,0.167884616364078,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0.441182838239031,0.463735671240843|short_description=p@chr7:130513816..130513835,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=386 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:130513816..130513835,+ | |||
|id=chr7:130513816..130513835,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.93e-08!25;CL:0000075!6.29e-08!7;CL:0002563!7.57e-08!9;CL:0002251!7.57e-08!9;CL:0000239!3.58e-07!6;CL:0000677!3.58e-07!6;CL:0000212!3.58e-07!6;CL:0000584!3.58e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.61e-27,9;CL:0002251,3.61e-27,9;CL:0000239,6.35e-19,6;CL:0000677,6.35e-19,6;CL:0000584,6.35e-19,6;CL:0000075,2.87e-16,7;CL:0002076,3.09e-16,15;CL:0000223,4.05e-12,20;CL:0002250,8.39e-10,3;CL:0000066,1.22e-09,25;CL:0000355,2.53e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.52e-21,3;DOID:4045,8.52e-21,3;DOID:0050686,1.02e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0003350!7.57e-08!9;UBERON:0004808!7.57e-08!9;UBERON:0001277!7.57e-08!9;UBERON:0000485!1.48e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.61e-27,9;UBERON:0004808,3.61e-27,9;UBERON:0001277,3.61e-27,9;UBERON:0000485,3.31e-22,11;UBERON:0001242,9.16e-19,13;UBERON:0001262,9.16e-19,13;UBERON:0004786,9.16e-19,13;UBERON:0000344,3.09e-16,15;UBERON:0004923,4.72e-10,24;UBERON:0000160,1.04e-07,31;UBERON:0000490,1.62e-07,66;UBERON:0001134,2.53e-07,9;UBERON:0002036,2.53e-07,9;UBERON:0002385,2.53e-07,9;UBERON:0000486,2.53e-07,9;UBERON:0007503,2.53e-07,9;UBERON:0001015,2.53e-07,9;UBERON:0002329,2.53e-07,9;UBERON:0003082,2.53e-07,9;UBERON:0003059,2.53e-07,9;UBERON:0007282,2.53e-07,9;UBERON:0004290,2.53e-07,9;UBERON:0009618,2.53e-07,9 | |||
|phase1_expression=0,4.18770489167233,1.81999695755814,7.56160528267075,10.5188103288733,0.671517087647559,0.233612640595526,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0,0,0,0.159992422793407,0.22940928106717,0.57423196411502,0.86152399231815,0.430942465371778,0,0,0,0.635030673459631,0,0,2.02196133825892,0,1.42918549383658,4.18531630736908,1.5626706890476,1.57057123192139,22.3527965451785,2.04913645487534,1.45653105909346,0.125896817975577,0.101376931219515,0,0,0,0.219686182734472,0,0,0,0.167782606057736,0,0,0.257259436035947,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0.182975287204819,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0.579728977403356,0,0,0,0.649776417447669,0,0,0,0.259786004602869,0,0.422530259330042,0,0,0,0,0.253359865475099,0.505524445014783,0,0.258937883647172,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0.494389935468748,0,0.884610551949874,0.485300549842228,0.220841518460394,0,0,0,0,0,0,0,0.254140454146129,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0,0.189491411770485,0.162964976442026,0,0,0,0,0.390267295715598,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0.163934945376675,0.757412781613119,0,0.390438744296638,0,0.238968797952552,0.445597348164788,0,0.809621403349789,0,0,0,0,0,0,0,1.32745138339963,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0.276399947608848,0,0,0,0,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0.221985953374065,0,0.167884616364078,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0.441182838239031,0.463735671240843 | |||
|short_description=p@chr7:130513816..130513835,+ | |||
}} |
Revision as of 11:42, 14 September 2013
Short description: | p@chr7:130513816..130513835, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:130513816..130513835, + |
Coexpression cluster: | MCL_coexpression_mm9:386 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.61e-27 | 9 |
epithelial cell of alimentary canal | 3.61e-27 | 9 |
brush border epithelial cell | 6.35e-19 | 6 |
gut absorptive cell | 6.35e-19 | 6 |
enterocyte | 6.35e-19 | 6 |
columnar/cuboidal epithelial cell | 2.87e-16 | 7 |
endo-epithelial cell | 3.09e-16 | 15 |
endodermal cell | 4.05e-12 | 20 |
intestinal crypt stem cell | 8.39e-10 | 3 |
epithelial cell | 1.22e-09 | 25 |
multi-potent skeletal muscle stem cell | 2.53e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.61e-27 | 9 |
gastrointestinal system epithelium | 3.61e-27 | 9 |
intestinal epithelium | 3.61e-27 | 9 |
simple columnar epithelium | 3.31e-22 | 11 |
intestinal mucosa | 9.16e-19 | 13 |
wall of intestine | 9.16e-19 | 13 |
gastrointestinal system mucosa | 9.16e-19 | 13 |
mucosa | 3.09e-16 | 15 |
organ component layer | 4.72e-10 | 24 |
intestine | 1.04e-07 | 31 |
unilaminar epithelium | 1.62e-07 | 66 |
skeletal muscle tissue | 2.53e-07 | 9 |
striated muscle tissue | 2.53e-07 | 9 |
muscle tissue | 2.53e-07 | 9 |
multilaminar epithelium | 2.53e-07 | 9 |
epithelial vesicle | 2.53e-07 | 9 |
musculature | 2.53e-07 | 9 |
somite | 2.53e-07 | 9 |
myotome | 2.53e-07 | 9 |
presomitic mesoderm | 2.53e-07 | 9 |
presumptive segmental plate | 2.53e-07 | 9 |
dermomyotome | 2.53e-07 | 9 |
trunk paraxial mesoderm | 2.53e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.52e-21 | 3 |
muscle cancer | 8.52e-21 | 3 |
organ system cancer | 1.02e-10 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.