FFCP PHASE1:Mm9::chr2:11261088..11261128,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100503147|HGNC=|MCL_coexpression_id=28|UniProt=|association_with_transcript=0bp_to_ENSMUST00000131188,NR_040369,uc008iid.1_5end|description=CAGE_peak_1_at_Gm13293_5end|id=chr2:11261088..11261128,+|ontology_enrichment_celltype=CL:0000333!5.40e-08!10;CL:0000095!5.40e-08!10;CL:0000243!5.40e-08!10;CL:0000123!5.40e-08!10;CL:0000125!5.40e-08!10;CL:0000030!5.40e-08!10;CL:0000339!5.40e-08!10;CL:0002453!1.12e-07!8|ontology_enrichment_celltype_v019_2=CL:0002453,4.18e-15,8;CL:0000333,7.64e-15,10;CL:0000095,7.64e-15,10;CL:0000243,7.64e-15,10;CL:0000123,7.64e-15,10;CL:0000125,7.64e-15,10;CL:0000030,7.64e-15,10;CL:0000339,7.64e-15,10;CL:0000128,1.40e-10,6;CL:0000126,1.40e-10,6;CL:0000127,1.40e-10,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!8.65e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.73e-07,95;UBERON:0000924,7.73e-07,95;UBERON:0006601,7.73e-07,95;UBERON:0001016,8.07e-07,75|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.510259740906419,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.52065396829272,3.85448179539531,0.782391344348039,13.7355848519681,7.24964403023757,4.86074747685709,9.09911740564856,8.62515386189829,0,0,0,0.514518872071894,2.86533439938757,2.57836046138721,0,0,0,0,0.889294796111139,0,0,0.7104801149461,17.9760066311043,26.5110630671873,0,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0.191690942036473,0,2.20231761998777,0.638436690425939,0.921639199537461,0,0,0,1.11673199600552,1.68828783009504,0.763991238884051,0,0.427115042397309,0,0.151452386666368,1.058001841495,0.289864488701678,0,0,0,0,0,2.24711072210803,0,0.259786004602869,0,0,0,0,0,0,0,1.51657333504435,0.11418387971906,0.258937883647172,0.148442139064825,0,0.304465478312141,0,0,0.117588707135705,0,1.48316980640624,2.60278842455841,0,0,0.220841518460394,0.969750506270444,0,0.878342391034642,1.25668024088073,0,0.11981512450592,0,0,1.9472783122627,1.83000241127451,0.251308704225729,0.695297280769106,1.27857728665165,2.70124457927428,2.43361894601636,1.12023300235348,0.497627882440372,0.505445516867349,357.540713151119,0,0,0,0,0,0,0.0937017245597288,115.899110091079,0,0,0,0,0,0.348252166522167,0,0.796137067273973,0,0,0,0.621377317606506,0.469052119962192,0.540186184383045,0,0,0.462801338662135,0.465067889500816,0,0.467061369468678,0.16455984991348,0.164167464079095,0.56748166682099,0.146199987425332,0.658650345873152,0.134206418760372,0.630869845692382,0.308713837137853,0,0,0.426576501070468,0.464473343720877,0.257734922644187,0.201683524623343,0.22237804384487,0.570676878337677,0,0.494096864172033,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0.126473074248515,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,2.77129785249907,0.189491411770485,0.488894929326078,0.169745085775188,0,0,0,0,0.315270288212382,0.664394068946325,0.478364305972461,0.81931657357869,1.20879487306127,0.867894351489069,0,0,0,0,2.88991061978026,3.7507739709505,0,0.252470927204373,0,0,0,0,0,0.566153061577665,0,0,0,0.642642632843614,0.99358059645788,0.890328018336276,2.60619134965722,1.48473110675282,1.32745138339963,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0.356497378384721,1.58018378967908,1.05418608574999,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,3.52308073819968,0,0.206386867963223,0,0,0,0.457556346413045,0.679913719975421,0.69975726161829,0.276399947608848,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0.56369293868419,0.747582730219894,0.165458490457098,0,0,0,0.117357238645754,0,0,0.241584120826006,0,1.26404448251271,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.487289403698762,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0.375364950902364,1.28206136987086,0,0,0.564751842617067,0.920650473014354,0,0.859265911718438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0.382576664137687,0.661774257358546,0.463735671240843|short_description=p1@Gm13293}} | ||
|EntrezGene=100503147 | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000131188,NR_040369,uc008iid.1_5end | |||
|description=CAGE_peak_1_at_Gm13293_5end | |||
|id=chr2:11261088..11261128,+ | |||
|ontology_enrichment_celltype=CL:0000333!5.40e-08!10;CL:0000095!5.40e-08!10;CL:0000243!5.40e-08!10;CL:0000123!5.40e-08!10;CL:0000125!5.40e-08!10;CL:0000030!5.40e-08!10;CL:0000339!5.40e-08!10;CL:0002453!1.12e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,4.18e-15,8;CL:0000333,7.64e-15,10;CL:0000095,7.64e-15,10;CL:0000243,7.64e-15,10;CL:0000123,7.64e-15,10;CL:0000125,7.64e-15,10;CL:0000030,7.64e-15,10;CL:0000339,7.64e-15,10;CL:0000128,1.40e-10,6;CL:0000126,1.40e-10,6;CL:0000127,1.40e-10,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!8.65e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.73e-07,95;UBERON:0000924,7.73e-07,95;UBERON:0006601,7.73e-07,95;UBERON:0001016,8.07e-07,75 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.510259740906419,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.52065396829272,3.85448179539531,0.782391344348039,13.7355848519681,7.24964403023757,4.86074747685709,9.09911740564856,8.62515386189829,0,0,0,0.514518872071894,2.86533439938757,2.57836046138721,0,0,0,0,0.889294796111139,0,0,0.7104801149461,17.9760066311043,26.5110630671873,0,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0.191690942036473,0,2.20231761998777,0.638436690425939,0.921639199537461,0,0,0,1.11673199600552,1.68828783009504,0.763991238884051,0,0.427115042397309,0,0.151452386666368,1.058001841495,0.289864488701678,0,0,0,0,0,2.24711072210803,0,0.259786004602869,0,0,0,0,0,0,0,1.51657333504435,0.11418387971906,0.258937883647172,0.148442139064825,0,0.304465478312141,0,0,0.117588707135705,0,1.48316980640624,2.60278842455841,0,0,0.220841518460394,0.969750506270444,0,0.878342391034642,1.25668024088073,0,0.11981512450592,0,0,1.9472783122627,1.83000241127451,0.251308704225729,0.695297280769106,1.27857728665165,2.70124457927428,2.43361894601636,1.12023300235348,0.497627882440372,0.505445516867349,357.540713151119,0,0,0,0,0,0,0.0937017245597288,115.899110091079,0,0,0,0,0,0.348252166522167,0,0.796137067273973,0,0,0,0.621377317606506,0.469052119962192,0.540186184383045,0,0,0.462801338662135,0.465067889500816,0,0.467061369468678,0.16455984991348,0.164167464079095,0.56748166682099,0.146199987425332,0.658650345873152,0.134206418760372,0.630869845692382,0.308713837137853,0,0,0.426576501070468,0.464473343720877,0.257734922644187,0.201683524623343,0.22237804384487,0.570676878337677,0,0.494096864172033,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0.126473074248515,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,2.77129785249907,0.189491411770485,0.488894929326078,0.169745085775188,0,0,0,0,0.315270288212382,0.664394068946325,0.478364305972461,0.81931657357869,1.20879487306127,0.867894351489069,0,0,0,0,2.88991061978026,3.7507739709505,0,0.252470927204373,0,0,0,0,0,0.566153061577665,0,0,0,0.642642632843614,0.99358059645788,0.890328018336276,2.60619134965722,1.48473110675282,1.32745138339963,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0.356497378384721,1.58018378967908,1.05418608574999,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,3.52308073819968,0,0.206386867963223,0,0,0,0.457556346413045,0.679913719975421,0.69975726161829,0.276399947608848,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0.56369293868419,0.747582730219894,0.165458490457098,0,0,0,0.117357238645754,0,0,0.241584120826006,0,1.26404448251271,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.487289403698762,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0.375364950902364,1.28206136987086,0,0,0.564751842617067,0.920650473014354,0,0.859265911718438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0.382576664137687,0.661774257358546,0.463735671240843 | |||
|short_description=p1@Gm13293 | |||
}} |
Revision as of 21:37, 13 September 2013
Short description: | p1@Gm13293 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm13293_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | 0bp_to_ENSMUST00000131188, NR_040369, uc008iid.1_5end |
EntrezGene: | Gm13293 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 4.18e-15 | 8 |
migratory neural crest cell | 7.64e-15 | 10 |
neuron associated cell | 7.64e-15 | 10 |
glial cell (sensu Vertebrata) | 7.64e-15 | 10 |
neuron associated cell (sensu Vertebrata) | 7.64e-15 | 10 |
glial cell | 7.64e-15 | 10 |
glioblast | 7.64e-15 | 10 |
glioblast (sensu Vertebrata) | 7.64e-15 | 10 |
oligodendrocyte | 1.40e-10 | 6 |
macroglial cell | 1.40e-10 | 6 |
astrocyte | 1.40e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 7.73e-07 | 95 |
ectoderm | 7.73e-07 | 95 |
presumptive ectoderm | 7.73e-07 | 95 |
nervous system | 8.07e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.