FFCP PHASE1:Mm9::chr4:40674134..40674138,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:40674134..40674138,+|id=chr4:40674134..40674138,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,2.75e-07,1;CL:0002078,2.75e-07,1;CL:0000115,2.75e-07,1;CL:0002262,2.75e-07,1;CL:1000398,2.75e-07,1;CL:0002374,4.10e-07,1;CL:0000202,4.10e-07,1;CL:0000199,4.10e-07,1;CL:0000855,4.10e-07,1;CL:0000589,4.10e-07,1;CL:0000625,6.09e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.75e-07,1;UBERON:0001281,2.75e-07,1;UBERON:0000353,2.75e-07,1;UBERON:0003497,2.75e-07,1;UBERON:0003909,2.75e-07,1;UBERON:0003928,2.75e-07,1;UBERON:0003835,2.75e-07,1;UBERON:0003513,2.75e-07,1;UBERON:0001280,2.75e-07,1;UBERON:0004647,2.75e-07,1;UBERON:0002294,2.75e-07,1;UBERON:0001173,2.75e-07,1;UBERON:0004912,2.75e-07,1;UBERON:0005171,2.75e-07,1|phase1_expression=1.44133962394315,0,0,0.90739263392049,1.00179145989269,0.16787927191189,0.233612640595526,0.903863264091034,0.140788722151667,0.936258105287974,0.68487187290202,0.239316476986009,0.513602189793617,1.39872643870396,0,0.404950534779652,0,0.788655413395594,0.137114433605739,1.27316895539409,0.680346321208558,0.496454756004426,0.783599367416806,0.159992422793407,0,0.57423196411502,0,0.430942465371778,0,0,0.221730510655305,0.635030673459631,0,0,0.866554859253824,0.498703936075477,0.816677425049476,0,0,0,3.52938892818609,0,0,0.377690453926732,0.304130793658544,0.917733760808408,0,0,0,0,0,0,0.671130424230945,0,1.34437519656986,0.514518872071894,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0.540023753326763,0.420649922702764,0,0,0.489963196859816,0.191690942036473,0,0,0,0,0.263772575460388,0.182975287204819,0,0,0,0.15279824777681,0,0.569486723196412,0.186399445825301,0.37863096666592,0.226714680320357,4.05810284182349,0,0.679971333707751,0.539703191637817,0.649776417447669,0.448026887097336,0.702222100658759,0,0.519572009205738,0,0.422530259330042,0,0,0,1.29894624606728,0.760079596425296,0,0.45673551887624,0,0,0.346970653532272,0,0.691846491768175,0.452167921657868,1.05829836422134,0.251333182659351,0.247194967734374,0.433798070759735,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0.958520996047362,0,0,0.449371918214468,0,0.251308704225729,0,0.255715457330331,0,0.162241263067758,0.712875546952214,0.124406970610093,0.252722758433675,0.210441855886474,0.520481771850815,0.459804208866946,0.900310649026746,0.150704817835715,0.340182495756639,0.12811372028485,0.468508622798644,0,0,0.378212160335639,0.351902248327898,0,0.278047249225598,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0.284163499395593,0,0,0.540186184383045,0,0.787056926989615,0.617068451549513,0.465067889500816,0.268273401399619,0.583826711835847,0.493679549740441,0.820837320395476,0.162137619091711,1.02339991197733,0,0.402619256281115,0.210289948564127,0.205809224758569,0.330418782983798,0,0.213288250535234,0.696710015581316,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0,0.38992817423824,0.898819408654221,0.216138049874694,0.597423819763102,0.189667900953082,0.342745537829186,0,0.407302655690628,0.775809948670503,0.701358198903186,0.252946148497029,0.295220295959204,0.941992367048249,0,1.48226313543574,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0,0.810676133875177,0.274561413188081,1.43768206527355,0,0.624075346229121,0,0.358794827043824,0.964887042726734,0.554259570499814,0.189491411770485,0,0.678980343100753,0.704070744865506,0,0.238043640886014,0.585400943573396,0.315270288212382,0.44292937929755,0.478364305972461,0.81931657357869,0.863424909329478,0.578596234326046,0,0,0.491764273019036,0,0.321101179975584,0.117211686592203,0.163934945376675,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.488660878060728,0.494910368917606,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.36012218806262,0.258717367565509,0.214337035031592,0,0.713475270408282,0.493647061806363,0.608929898229199,0.23467170806371,0.63549621259146,0,0.16488625294148,0.322928853391811,0.120625849856312,0.238744688006273,0.164140899745061,0.291480836629851,0,0.341741761595705,0.206386867963223,0.370389054739423,0.565105371014073,0.136694227721025,1.14389086603261,0.509935289981566,0.139951452323658,0,0,0.158167996790568,0,0.432021363287205,0,0.87345025498471,0.944050424693745,0.0826534557253359,0,0.648074866458964,0.621339313086926,0,0.149516546043979,0.496375471371293,0.194451188344048,0.129159823477731,0.337912250981556,0.469428954583016,0,0.314578033277133,0.241584120826006,0.288030006257865,0.316011120628178,0,0.308132871494482,0.25984164595559,0.358053391334963,0.39736270956253,1.08175904567972,0.886137163047463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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:40674134..40674138,+ | |||
|id=chr4:40674134..40674138,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,2.75e-07,1;CL:0002078,2.75e-07,1;CL:0000115,2.75e-07,1;CL:0002262,2.75e-07,1;CL:1000398,2.75e-07,1;CL:0002374,4.10e-07,1;CL:0000202,4.10e-07,1;CL:0000199,4.10e-07,1;CL:0000855,4.10e-07,1;CL:0000589,4.10e-07,1;CL:0000625,6.09e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.75e-07,1;UBERON:0001281,2.75e-07,1;UBERON:0000353,2.75e-07,1;UBERON:0003497,2.75e-07,1;UBERON:0003909,2.75e-07,1;UBERON:0003928,2.75e-07,1;UBERON:0003835,2.75e-07,1;UBERON:0003513,2.75e-07,1;UBERON:0001280,2.75e-07,1;UBERON:0004647,2.75e-07,1;UBERON:0002294,2.75e-07,1;UBERON:0001173,2.75e-07,1;UBERON:0004912,2.75e-07,1;UBERON:0005171,2.75e-07,1 | |||
|phase1_expression=1.44133962394315,0,0,0.90739263392049,1.00179145989269,0.16787927191189,0.233612640595526,0.903863264091034,0.140788722151667,0.936258105287974,0.68487187290202,0.239316476986009,0.513602189793617,1.39872643870396,0,0.404950534779652,0,0.788655413395594,0.137114433605739,1.27316895539409,0.680346321208558,0.496454756004426,0.783599367416806,0.159992422793407,0,0.57423196411502,0,0.430942465371778,0,0,0.221730510655305,0.635030673459631,0,0,0.866554859253824,0.498703936075477,0.816677425049476,0,0,0,3.52938892818609,0,0,0.377690453926732,0.304130793658544,0.917733760808408,0,0,0,0,0,0,0.671130424230945,0,1.34437519656986,0.514518872071894,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0.540023753326763,0.420649922702764,0,0,0.489963196859816,0.191690942036473,0,0,0,0,0.263772575460388,0.182975287204819,0,0,0,0.15279824777681,0,0.569486723196412,0.186399445825301,0.37863096666592,0.226714680320357,4.05810284182349,0,0.679971333707751,0.539703191637817,0.649776417447669,0.448026887097336,0.702222100658759,0,0.519572009205738,0,0.422530259330042,0,0,0,1.29894624606728,0.760079596425296,0,0.45673551887624,0,0,0.346970653532272,0,0.691846491768175,0.452167921657868,1.05829836422134,0.251333182659351,0.247194967734374,0.433798070759735,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0.958520996047362,0,0,0.449371918214468,0,0.251308704225729,0,0.255715457330331,0,0.162241263067758,0.712875546952214,0.124406970610093,0.252722758433675,0.210441855886474,0.520481771850815,0.459804208866946,0.900310649026746,0.150704817835715,0.340182495756639,0.12811372028485,0.468508622798644,0,0,0.378212160335639,0.351902248327898,0,0.278047249225598,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0.284163499395593,0,0,0.540186184383045,0,0.787056926989615,0.617068451549513,0.465067889500816,0.268273401399619,0.583826711835847,0.493679549740441,0.820837320395476,0.162137619091711,1.02339991197733,0,0.402619256281115,0.210289948564127,0.205809224758569,0.330418782983798,0,0.213288250535234,0.696710015581316,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0,0.38992817423824,0.898819408654221,0.216138049874694,0.597423819763102,0.189667900953082,0.342745537829186,0,0.407302655690628,0.775809948670503,0.701358198903186,0.252946148497029,0.295220295959204,0.941992367048249,0,1.48226313543574,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0,0.810676133875177,0.274561413188081,1.43768206527355,0,0.624075346229121,0,0.358794827043824,0.964887042726734,0.554259570499814,0.189491411770485,0,0.678980343100753,0.704070744865506,0,0.238043640886014,0.585400943573396,0.315270288212382,0.44292937929755,0.478364305972461,0.81931657357869,0.863424909329478,0.578596234326046,0,0,0.491764273019036,0,0.321101179975584,0.117211686592203,0.163934945376675,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.488660878060728,0.494910368917606,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.36012218806262,0.258717367565509,0.214337035031592,0,0.713475270408282,0.493647061806363,0.608929898229199,0.23467170806371,0.63549621259146,0,0.16488625294148,0.322928853391811,0.120625849856312,0.238744688006273,0.164140899745061,0.291480836629851,0,0.341741761595705,0.206386867963223,0.370389054739423,0.565105371014073,0.136694227721025,1.14389086603261,0.509935289981566,0.139951452323658,0,0,0.158167996790568,0,0.432021363287205,0,0.87345025498471,0.944050424693745,0.0826534557253359,0,0.648074866458964,0.621339313086926,0,0.149516546043979,0.496375471371293,0.194451188344048,0.129159823477731,0.337912250981556,0.469428954583016,0,0.314578033277133,0.241584120826006,0.288030006257865,0.316011120628178,0,0.308132871494482,0.25984164595559,0.358053391334963,0.39736270956253,1.08175904567972,0.886137163047463,0.302899349844443,0.0762068066549998,0.705783295957884,0.487289403698762,0.962118416403295,0.818138315270983,0.226730383615211,0.221985953374065,0.0897138566094757,0.167884616364078,0,0.187682475451182,0,0,0.501572104035363,0.564751842617067,0,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0.45032120322422,0,0.51776031175182,0.103787347584177,0.399024873401031,0.682934423016537,0,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0,0.280924522409647,0.320125762024346,0.17230640686684,0,0.463537303779422,0.578727661391115,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.290692833264657,0,0.338458431566706,0.365855945745545,0.526139422875686,0.679020569229309,1.12228454331548,0.118635018124174,0,0.818462086339379,0.154936841185966,0.192906610981141,0.999242311751784,0.233931608445408,0.214871054048298,0,0.441182838239031,0 | |||
|short_description=p@chr4:40674134..40674138,+ | |||
}} |
Revision as of 04:55, 14 September 2013
Short description: | p@chr4:40674134..40674138, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:40674134..40674138, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 2.75e-07 | 1 |
meso-epithelial cell | 2.75e-07 | 1 |
endothelial cell | 2.75e-07 | 1 |
endothelial cell of sinusoid | 2.75e-07 | 1 |
endothelial cell of hepatic sinusoid | 2.75e-07 | 1 |
ear hair cell | 4.10e-07 | 1 |
auditory hair cell | 4.10e-07 | 1 |
mechanoreceptor cell | 4.10e-07 | 1 |
sensory hair cell | 4.10e-07 | 1 |
cochlear inner hair cell | 4.10e-07 | 1 |
CD8-positive, alpha-beta T cell | 6.09e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.75e-07 | 1 |
hepatic sinusoid | 2.75e-07 | 1 |
parenchyma | 2.75e-07 | 1 |
abdomen blood vessel | 2.75e-07 | 1 |
sinusoid | 2.75e-07 | 1 |
digestive system duct | 2.75e-07 | 1 |
abdominal segment blood vessel | 2.75e-07 | 1 |
trunk blood vessel | 2.75e-07 | 1 |
liver parenchyma | 2.75e-07 | 1 |
liver lobule | 2.75e-07 | 1 |
biliary system | 2.75e-07 | 1 |
biliary tree | 2.75e-07 | 1 |
biliary bud | 2.75e-07 | 1 |
hepatic duct | 2.75e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.