FFCP PHASE1:Mm9::chr8:46418478..46418530,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=102294|HGNC=|MCL_coexpression_id=265|UniProt=B2RSR0,Q9DBW0|association_with_transcript=19bp_to_NM_133969,uc009lou.1_5end|description=CAGE_peak_1_at_Cyp4v3_5end|id=chr8:46418478..46418530,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!6.19e-12!130;UBERON:0000925!6.19e-12!130;UBERON:0006595!6.19e-12!130;UBERON:0000160!2.35e-11!43;UBERON:0001007!2.96e-11!128;UBERON:0001555!2.96e-11!128;UBERON:0007026!2.96e-11!128;UBERON:0005409!5.98e-11!59;UBERON:0004921!2.02e-10!126;UBERON:0004185!2.02e-10!126;UBERON:0009854!5.98e-10!23;UBERON:0009856!5.98e-10!23;UBERON:0002365!9.79e-10!25;UBERON:0002330!9.79e-10!25;UBERON:0000344!1.04e-09!15;UBERON:0002107!1.19e-09!22;UBERON:0007499!1.19e-09!22;UBERON:0006925!1.19e-09!22;UBERON:0009497!1.19e-09!22;UBERON:0000015!1.19e-09!22;UBERON:0002423!1.19e-09!22;UBERON:0006235!1.19e-09!22;UBERON:0008835!1.19e-09!22;UBERON:0003894!1.19e-09!22;UBERON:0004161!1.19e-09!22;UBERON:0008836!1.19e-09!22;UBERON:0001242!1.16e-08!13;UBERON:0000060!1.16e-08!13;UBERON:0001262!1.16e-08!13;UBERON:0004786!1.16e-08!13;UBERON:0004923!3.43e-08!24;UBERON:0005256!3.77e-07!47;UBERON:0007023!5.41e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0009854,5.54e-10,23;UBERON:0009856,5.54e-10,23;UBERON:0002365,9.10e-10,25;UBERON:0002330,9.10e-10,25;UBERON:0000344,9.62e-10,15;UBERON:0002107,1.11e-09,22;UBERON:0007499,1.11e-09,22;UBERON:0006925,1.11e-09,22;UBERON:0009497,1.11e-09,22;UBERON:0000015,1.11e-09,22;UBERON:0002423,1.11e-09,22;UBERON:0006235,1.11e-09,22;UBERON:0008835,1.11e-09,22;UBERON:0003894,1.11e-09,22;UBERON:0004161,1.11e-09,22;UBERON:0008836,1.11e-09,22;UBERON:0000160,6.69e-09,31;UBERON:0004119,7.23e-09,118;UBERON:0000925,7.23e-09,118;UBERON:0006595,7.23e-09,118;UBERON:0001242,1.09e-08,13;UBERON:0001262,1.09e-08,13;UBERON:0004786,1.09e-08,13;UBERON:0005409,2.14e-08,47;UBERON:0001007,2.79e-08,116;UBERON:0001555,2.79e-08,116;UBERON:0007026,2.79e-08,116;UBERON:0004923,3.23e-08,24;UBERON:0005256,3.67e-08,45;UBERON:0004921,1.45e-07,114;UBERON:0007023,4.42e-07,51;UBERON:0005177,4.81e-07,79;UBERON:0002100,6.51e-07,90|phase1_expression=1.60148847104794,414.582784275561,383.564358805379,390.783761008424,398.713001037292,65.1371575018132,48.8250418844649,3.22808308603941,0.281577444303333,0.468129052643987,0.856089841127525,0.239316476986009,1.71200729931206,0.611942816932982,0.999329285446988,0.809901069559304,0.699561878128147,5.99378114180652,5.07323404341233,4.2438965179803,7.14363637268986,0.0992909512008853,0,126.554006429585,138.563205764571,382.438488100603,312.733209211488,262.013018946041,313.538642103017,617.47381791183,63.1931955367618,0,0,0,55.748362611996,50.2028628982647,45.1214277339836,0,1.5626706890476,2.09409497589519,0,0.683045484958446,1.94204141212461,11.330713617802,13.4831318521954,3.67093504323363,14.8654355426127,21.8025156380447,29.4379484864192,18.6652703111312,28.4172435899486,8.62515386189829,4.02678254538567,2.17608642603403,2.68875039313971,3.8588915405392,12.8940047972441,7.73508138416164,1.01158230429799,0,2.53532561402472,3.38844532069132,10.6715375533337,26.0970918011606,25.7105254267413,19.1829631035447,6.2916023208865,5.76327457982332,0.207379224616955,0.405017814995072,0,1.42825492201902,2.20868540951614,0.489963196859816,0.287536413054709,0,0,2.17068474744819,1.99688493233117,0.527545150920775,0.365950574409639,1.04182674111352,2.23346399201105,3.37657566019008,5.50073691996516,1.47314292736834,1.13897344639282,2.42319279572891,2.42323818666189,4.53429360640713,8.98579914975201,293.404542050653,318.906555508935,711.868509770281,632.232454176582,506.718409307087,133.84353238556,16.7021716126497,14.0284442485549,14.1335829804136,1.26759077799012,8.98285341900225,5.09610479413291,0,3.68034769719064,2.28023878927589,1.01104889002957,269.245588377543,24.8580368301285,17.2192881315197,1.38788261412909,2.74018930480927,4.38169444786511,4.82312449768392,7.2904998424137,13.4463252722753,5.19109432242185,38.1742302268567,4.42305275974937,2.26473589926373,5.52103796150984,6.78825354389311,14.9113408974498,3.80615036115011,4.81727425670947,481.792006123403,3.95389910869537,4.79922184794726,5.20987930999565,4.19413790333504,2.28750301409313,0.376963056338593,1.73824320192276,1.79000820131231,2.0778804455956,2.10913641988085,3.66621709861139,8.8328949133166,6.57079171927554,5.26104639716185,2.47228841629137,1.83921683546778,2.52086981727489,3.46621081022145,3.60593445502038,2.69038812598185,2.90475346135159,3.3631438196072,0.646703978798527,1.13463648100692,1.23165786914764,1.09597866213787,2.22437799380478,3.1342694986995,3.08673204611915,0.199034266818493,3.51106593656617,3.3455227924913,4.26245249093389,0,0.469052119962192,0.180062061461015,0.710234206755631,1.37734962223183,1.3884040159864,0.697601834251224,0,1.63471479314037,0.493679549740441,1.47750717671186,2.43206428637567,3.21639972335731,4.83010253640311,4.56301823785264,3.1543492284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| ||
|EntrezGene=102294 | |||
|HGNC= | |||
|MCL_coexpression_id=265 | |||
|UniProt=B2RSR0,Q9DBW0 | |||
|association_with_transcript=19bp_to_NM_133969,uc009lou.1_5end | |||
|description=CAGE_peak_1_at_Cyp4v3_5end | |||
|id=chr8:46418478..46418530,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.19e-12!130;UBERON:0000925!6.19e-12!130;UBERON:0006595!6.19e-12!130;UBERON:0000160!2.35e-11!43;UBERON:0001007!2.96e-11!128;UBERON:0001555!2.96e-11!128;UBERON:0007026!2.96e-11!128;UBERON:0005409!5.98e-11!59;UBERON:0004921!2.02e-10!126;UBERON:0004185!2.02e-10!126;UBERON:0009854!5.98e-10!23;UBERON:0009856!5.98e-10!23;UBERON:0002365!9.79e-10!25;UBERON:0002330!9.79e-10!25;UBERON:0000344!1.04e-09!15;UBERON:0002107!1.19e-09!22;UBERON:0007499!1.19e-09!22;UBERON:0006925!1.19e-09!22;UBERON:0009497!1.19e-09!22;UBERON:0000015!1.19e-09!22;UBERON:0002423!1.19e-09!22;UBERON:0006235!1.19e-09!22;UBERON:0008835!1.19e-09!22;UBERON:0003894!1.19e-09!22;UBERON:0004161!1.19e-09!22;UBERON:0008836!1.19e-09!22;UBERON:0001242!1.16e-08!13;UBERON:0000060!1.16e-08!13;UBERON:0001262!1.16e-08!13;UBERON:0004786!1.16e-08!13;UBERON:0004923!3.43e-08!24;UBERON:0005256!3.77e-07!47;UBERON:0007023!5.41e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,5.54e-10,23;UBERON:0009856,5.54e-10,23;UBERON:0002365,9.10e-10,25;UBERON:0002330,9.10e-10,25;UBERON:0000344,9.62e-10,15;UBERON:0002107,1.11e-09,22;UBERON:0007499,1.11e-09,22;UBERON:0006925,1.11e-09,22;UBERON:0009497,1.11e-09,22;UBERON:0000015,1.11e-09,22;UBERON:0002423,1.11e-09,22;UBERON:0006235,1.11e-09,22;UBERON:0008835,1.11e-09,22;UBERON:0003894,1.11e-09,22;UBERON:0004161,1.11e-09,22;UBERON:0008836,1.11e-09,22;UBERON:0000160,6.69e-09,31;UBERON:0004119,7.23e-09,118;UBERON:0000925,7.23e-09,118;UBERON:0006595,7.23e-09,118;UBERON:0001242,1.09e-08,13;UBERON:0001262,1.09e-08,13;UBERON:0004786,1.09e-08,13;UBERON:0005409,2.14e-08,47;UBERON:0001007,2.79e-08,116;UBERON:0001555,2.79e-08,116;UBERON:0007026,2.79e-08,116;UBERON:0004923,3.23e-08,24;UBERON:0005256,3.67e-08,45;UBERON:0004921,1.45e-07,114;UBERON:0007023,4.42e-07,51;UBERON:0005177,4.81e-07,79;UBERON:0002100,6.51e-07,90 | |||
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| |||
|short_description=p1@Cyp4v3 | |||
}} |
Revision as of 15:41, 14 September 2013
Short description: | p1@Cyp4v3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cyp4v3_5end |
Coexpression cluster: | MCL_coexpression_mm9:265 |
Association with transcript: | 19bp_to_NM_133969, uc009lou.1_5end |
EntrezGene: | Cyp4v3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 5.54e-10 | 23 |
sac | 5.54e-10 | 23 |
exocrine gland | 9.10e-10 | 25 |
exocrine system | 9.10e-10 | 25 |
mucosa | 9.62e-10 | 15 |
liver | 1.11e-09 | 22 |
epithelial sac | 1.11e-09 | 22 |
digestive gland | 1.11e-09 | 22 |
epithelium of foregut-midgut junction | 1.11e-09 | 22 |
anatomical boundary | 1.11e-09 | 22 |
hepatobiliary system | 1.11e-09 | 22 |
foregut-midgut junction | 1.11e-09 | 22 |
hepatic diverticulum | 1.11e-09 | 22 |
liver primordium | 1.11e-09 | 22 |
septum transversum | 1.11e-09 | 22 |
liver bud | 1.11e-09 | 22 |
intestine | 6.69e-09 | 31 |
endoderm-derived structure | 7.23e-09 | 118 |
endoderm | 7.23e-09 | 118 |
presumptive endoderm | 7.23e-09 | 118 |
intestinal mucosa | 1.09e-08 | 13 |
wall of intestine | 1.09e-08 | 13 |
gastrointestinal system mucosa | 1.09e-08 | 13 |
gastrointestinal system | 2.14e-08 | 47 |
digestive system | 2.79e-08 | 116 |
digestive tract | 2.79e-08 | 116 |
primitive gut | 2.79e-08 | 116 |
organ component layer | 3.23e-08 | 24 |
trunk mesenchyme | 3.67e-08 | 45 |
subdivision of digestive tract | 1.45e-07 | 114 |
adult organism | 4.42e-07 | 51 |
trunk region element | 4.81e-07 | 79 |
trunk | 6.51e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.