FFCP PHASE1:Mm9::chr6:115894954..115894961,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=171506|HGNC=|MCL_coexpression_id=117|UniProt=Q8VIK3,E0CZ52,E0CYL2|association_with_transcript=0bp_to_ENSMUST00000037831,ENSMUST00000161617,ENSMUST00000161969,ENSMUST00000162084,NM_138311,uc009djl.1,uc009djm.1,uc012eqt.1_5end|description=CAGE_peak_1_at_H1foo_5end|id=chr6:115894954..115894961,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000474!4.55e-11!9;UBERON:0000992!9.67e-10!3;UBERON:0003134!4.47e-09!8;UBERON:0003100!6.38e-09!11;UBERON:0005156!3.34e-07!26;UBERON:0000990!3.34e-07!26;UBERON:0001962!3.73e-07!2;UBERON:0001961!3.73e-07!2;UBERON:0001744!3.73e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0001962,6.41e-58,2;UBERON:0001961,6.41e-58,2;UBERON:0001744,6.41e-58,2;UBERON:0002465,4.15e-39,3;UBERON:0003199,5.62e-30,1;UBERON:0000992,4.56e-11,3;UBERON:0000344,8.43e-09,15|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,2.2940928106717,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.1233950818635,0.534196811001766,0.651547837414304,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0,0,0,0,0.632022241256357,0.202725215290164,0,0,0,0,0.120195449519969,0.295379054349154,0,0,0.100826185136841,0.292373642219257,0.0962118416403295,0.467507608726276,0,0,0,0,0,0.375364950902364,0.36630324853453,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0|short_description=p1@H1foo}} | ||
|EntrezGene=171506 | |||
|HGNC= | |||
|MCL_coexpression_id=117 | |||
|UniProt=Q8VIK3,E0CZ52,E0CYL2 | |||
|association_with_transcript=0bp_to_ENSMUST00000037831,ENSMUST00000161617,ENSMUST00000161969,ENSMUST00000162084,NM_138311,uc009djl.1,uc009djm.1,uc012eqt.1_5end | |||
|description=CAGE_peak_1_at_H1foo_5end | |||
|id=chr6:115894954..115894961,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000474!4.55e-11!9;UBERON:0000992!9.67e-10!3;UBERON:0003134!4.47e-09!8;UBERON:0003100!6.38e-09!11;UBERON:0005156!3.34e-07!26;UBERON:0000990!3.34e-07!26;UBERON:0001962!3.73e-07!2;UBERON:0001961!3.73e-07!2;UBERON:0001744!3.73e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,6.41e-58,2;UBERON:0001961,6.41e-58,2;UBERON:0001744,6.41e-58,2;UBERON:0002465,4.15e-39,3;UBERON:0003199,5.62e-30,1;UBERON:0000992,4.56e-11,3;UBERON:0000344,8.43e-09,15 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,2.2940928106717,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.1233950818635,0.534196811001766,0.651547837414304,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0,0,0,0,0.632022241256357,0.202725215290164,0,0,0,0,0.120195449519969,0.295379054349154,0,0,0.100826185136841,0.292373642219257,0.0962118416403295,0.467507608726276,0,0,0,0,0,0.375364950902364,0.36630324853453,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p1@H1foo | |||
}} |
Revision as of 08:36, 14 September 2013
Short description: | p1@H1foo |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_H1foo_5end |
Coexpression cluster: | MCL_coexpression_mm9:117 |
Association with transcript: | 0bp_to_ENSMUST00000037831, ENSMUST00000161617, ENSMUST00000161969, ENSMUST00000162084, NM_138311, uc009djl.1, uc009djm.1, uc012eqt.1_5end |
EntrezGene: | H1foo |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 6.41e-58 | 2 |
mucosa-associated lymphoid tissue | 6.41e-58 | 2 |
lymphoid tissue | 6.41e-58 | 2 |
lymphoid system | 4.15e-39 | 3 |
egg chamber | 5.62e-30 | 1 |
female gonad | 4.56e-11 | 3 |
mucosa | 8.43e-09 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.