FFCP PHASE1:Mm9::chr10:21713771..21713796,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20393|HGNC=|MCL_coexpression_id=2547|UniProt=Q9WVC6|association_with_transcript=75bp_to_ENSMUST00000092673,NM_001161850,uc007eow.2_5end|description=CAGE_peak_5_at_Sgk1_5end|id=chr10:21713771..21713796,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000128,3.48e-07,6;CL:0000126,3.48e-07,6;CL:0000127,3.48e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002100!8.19e-10!98;UBERON:0005177!6.27e-08!85;UBERON:0000926!5.16e-07!193;UBERON:0004120!5.16e-07!193;UBERON:0006603!5.16e-07!193;UBERON:0003104!7.49e-07!131;UBERON:0009142!7.49e-07!131;UBERON:0009569!8.27e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.59e-12,90;UBERON:0005177,8.87e-11,79;UBERON:0003104,2.46e-10,61;UBERON:0009142,2.46e-10,61;UBERON:0009569,1.14e-08,66;UBERON:0004111,2.08e-07,122;UBERON:0006554,2.44e-07,18;UBERON:0003914,2.87e-07,47;UBERON:0005256,2.97e-07,45;UBERON:0003103,4.97e-07,43|phase1_expression=1.12104192973356,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0,0.171200729931206,0.34968160967599,0,0,0,0,0,0.84877930359606,0.850432901510698,0,0.261199789138935,0,0,0,0.430761996159075,0.215471232685889,0,0,0.665191531965914,0,0,0,0,0.332469290716985,0,0,0,0.523523743973798,0.588231488031014,1.36609096991689,0,1.51076181570693,2.02753862439029,0.550640256485045,9.38869613217647,13.9536100083486,17.3552084360233,17.1098311185369,3.49966054063406,4.31257693094915,0,0,0,10.5476368774738,6.87680255853016,12.3761302146586,0,0,0,1.69422266034566,0.889294796111139,0,0,0.7104801149461,0.599200221036809,0.384218305321555,0.103689612308478,0,0,0.571301968807607,0.220868540951614,0,0.0958454710182364,0,1.10115880999389,0.766124028511126,0.768032666281217,0,0,0,0.558365998002762,0,0.916789486660861,0.589257170947335,0.142371680799103,0,2.87759534666099,0.453429360640713,35.3634676216047,12.0459342777394,2.719885334831,1.61910957491345,1.94932925234301,0.448026887097336,1.12355536105401,3.06774580640504,2.59786004602869,3.5333957451034,2.25349471642689,5.13305909657271,2.54805239706646,0,0.649473123033642,1.77351905832569,0.505524445014783,1.7127581957859,0.258937883647172,2.67195850316685,0.346970653532272,1.82679286987285,1.15307748628029,2.41156224884196,2.82212897125692,1.88499886994513,5.43828929015623,2.60278842455841,0.884610551949874,0.970601099684455,1.10420759230197,0.969750506270444,0,1.17112318804619,1.25668024088073,0,0.11981512450592,0.599902730993408,0.254140454146129,0.748953197024114,0.457500602818626,0,1.21677024134594,1.02286182932132,0.41557608911912,1.29793010454206,1.52759045775474,1.99051152976149,1.26361379216837,1.05220927943237,0.130120442962704,0.229902104433473,0.360124259610698,0.452114453507145,1.56483948048054,0.384341160854549,0.937017245597288,2.06962696591213,0.215567992932842,0.189106080167819,0.351902248327898,0,0.278047249225598,0.348252166522167,1.23469281844766,0.59710280045548,0,0.257347907114715,0.852490498186778,0,0.703578179943289,0.180062061461015,0.473489471170421,0.393528463494808,0.617068451549513,0.930135779001631,1.60964040839772,4.08678698285093,1.31647879930784,3.2833492815819,4.05344047729279,5.26319954731196,2.41505126820156,4.02619256281115,0.630869845692382,0.514523061896422,0,0.793351699990633,0.213288250535234,0.464473343720877,0.515469845288373,0.605050573870028,0.667134131534611,0,0.949058123089023,0.988193728344065,0,0,0.58489226135736,0,0,0.995706366271836,0.379335801906163,1.02823661348756,1.1270773567308,1.01825663922657,1.16371492300575,2.59502533594179,2.27651533647326,4.28069429140846,2.35498091762062,4.07210640941942,1.77871576252289,0.333690211432188,0.196558995113203,0,0.405720242777006,0,0.25462585178142,1.15078454980324,1.94562272130042,0,0,1.86070473834252,0.936113019343682,1.26289438973556,0.717589654087649,3.37710464954357,2.95605104266567,0.189491411770485,0,0.339490171550376,0.469380496577004,0.670025029767263,1.6663054862021,2.14647012643579,2.20689201748667,1.7717175171902,1.11618338060241,3.27726629431476,2.59027472798843,4.91806799177139,1.50791283939272,0.54390568381871,2.45882136509518,2.20749397043786,1.12385412991454,1.05490517932983,1.3114795630134,3.53459298086122,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0.851640511249612,0.534196811001766,2.28041743095006,1.48473110675282,1.32745138339963,0.728341908464944,0.604647113929502,0.565815239267694,0.590603785761546,1.53717573971964,1.55056975900933,1.09060118843252,1.06949213515416,1.8962205476149,4.21674434299995,5.15677716240934,0.340439605753788,0.36012218806262,0.388076051348264,0.643011105094777,0,0.713475270408282,0.329098041204242,2.43571959291679,0.704015124191131,2.54198485036584,3.08739757276947,1.48397627647332,1.93757312035087,0.301564624640779,0.596861720015682,0.328281799490123,0.874442509889552,0.556275906031529,0.854354403989263,0.206386867963223,0.370389054739423,0.565105371014073,0.136694227721025,0,0.679913719975421,0.279902904647316,0.829199842826543,0.954670618015114,0,0.60995840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| ||
|EntrezGene=20393 | |||
|HGNC= | |||
|MCL_coexpression_id=2547 | |||
|UniProt=Q9WVC6 | |||
|association_with_transcript=75bp_to_ENSMUST00000092673,NM_001161850,uc007eow.2_5end | |||
|description=CAGE_peak_5_at_Sgk1_5end | |||
|id=chr10:21713771..21713796,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,3.48e-07,6;CL:0000126,3.48e-07,6;CL:0000127,3.48e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!8.19e-10!98;UBERON:0005177!6.27e-08!85;UBERON:0000926!5.16e-07!193;UBERON:0004120!5.16e-07!193;UBERON:0006603!5.16e-07!193;UBERON:0003104!7.49e-07!131;UBERON:0009142!7.49e-07!131;UBERON:0009569!8.27e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.59e-12,90;UBERON:0005177,8.87e-11,79;UBERON:0003104,2.46e-10,61;UBERON:0009142,2.46e-10,61;UBERON:0009569,1.14e-08,66;UBERON:0004111,2.08e-07,122;UBERON:0006554,2.44e-07,18;UBERON:0003914,2.87e-07,47;UBERON:0005256,2.97e-07,45;UBERON:0003103,4.97e-07,43 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0,0.171200729931206,0.34968160967599,0,0,0,0,0,0.84877930359606,0.850432901510698,0,0.261199789138935,0,0,0,0.430761996159075,0.215471232685889,0,0,0.665191531965914,0,0,0,0,0.332469290716985,0,0,0,0.523523743973798,0.588231488031014,1.36609096991689,0,1.51076181570693,2.02753862439029,0.550640256485045,9.38869613217647,13.9536100083486,17.3552084360233,17.1098311185369,3.49966054063406,4.31257693094915,0,0,0,10.5476368774738,6.87680255853016,12.3761302146586,0,0,0,1.69422266034566,0.889294796111139,0,0,0.7104801149461,0.599200221036809,0.384218305321555,0.103689612308478,0,0,0.571301968807607,0.220868540951614,0,0.0958454710182364,0,1.10115880999389,0.766124028511126,0.768032666281217,0,0,0,0.558365998002762,0,0.916789486660861,0.589257170947335,0.142371680799103,0,2.87759534666099,0.453429360640713,35.3634676216047,12.0459342777394,2.719885334831,1.61910957491345,1.94932925234301,0.448026887097336,1.12355536105401,3.06774580640504,2.59786004602869,3.5333957451034,2.25349471642689,5.13305909657271,2.54805239706646,0,0.649473123033642,1.77351905832569,0.505524445014783,1.7127581957859,0.258937883647172,2.67195850316685,0.346970653532272,1.82679286987285,1.15307748628029,2.41156224884196,2.82212897125692,1.88499886994513,5.43828929015623,2.60278842455841,0.884610551949874,0.970601099684455,1.10420759230197,0.969750506270444,0,1.17112318804619,1.25668024088073,0,0.11981512450592,0.599902730993408,0.254140454146129,0.748953197024114,0.457500602818626,0,1.21677024134594,1.02286182932132,0.41557608911912,1.29793010454206,1.52759045775474,1.99051152976149,1.26361379216837,1.05220927943237,0.130120442962704,0.229902104433473,0.360124259610698,0.452114453507145,1.56483948048054,0.384341160854549,0.937017245597288,2.06962696591213,0.215567992932842,0.189106080167819,0.351902248327898,0,0.278047249225598,0.348252166522167,1.23469281844766,0.59710280045548,0,0.257347907114715,0.852490498186778,0,0.703578179943289,0.180062061461015,0.473489471170421,0.393528463494808,0.617068451549513,0.930135779001631,1.60964040839772,4.08678698285093,1.31647879930784,3.2833492815819,4.05344047729279,5.26319954731196,2.41505126820156,4.02619256281115,0.630869845692382,0.514523061896422,0,0.793351699990633,0.213288250535234,0.464473343720877,0.515469845288373,0.605050573870028,0.667134131534611,0,0.949058123089023,0.988193728344065,0,0,0.58489226135736,0,0,0.995706366271836,0.379335801906163,1.02823661348756,1.1270773567308,1.01825663922657,1.16371492300575,2.59502533594179,2.27651533647326,4.28069429140846,2.35498091762062,4.07210640941942,1.77871576252289,0.333690211432188,0.196558995113203,0,0.405720242777006,0,0.25462585178142,1.15078454980324,1.94562272130042,0,0,1.86070473834252,0.936113019343682,1.26289438973556,0.717589654087649,3.37710464954357,2.95605104266567,0.189491411770485,0,0.339490171550376,0.469380496577004,0.670025029767263,1.6663054862021,2.14647012643579,2.20689201748667,1.7717175171902,1.11618338060241,3.27726629431476,2.59027472798843,4.91806799177139,1.50791283939272,0.54390568381871,2.45882136509518,2.20749397043786,1.12385412991454,1.05490517932983,1.3114795630134,3.53459298086122,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0.851640511249612,0.534196811001766,2.28041743095006,1.48473110675282,1.32745138339963,0.728341908464944,0.604647113929502,0.565815239267694,0.590603785761546,1.53717573971964,1.55056975900933,1.09060118843252,1.06949213515416,1.8962205476149,4.21674434299995,5.15677716240934,0.340439605753788,0.36012218806262,0.388076051348264,0.643011105094777,0,0.713475270408282,0.329098041204242,2.43571959291679,0.704015124191131,2.54198485036584,3.08739757276947,1.48397627647332,1.93757312035087,0.301564624640779,0.596861720015682,0.328281799490123,0.874442509889552,0.556275906031529,0.854354403989263,0.206386867963223,0.370389054739423,0.565105371014073,0.136694227721025,0,0.679913719975421,0.279902904647316,0.829199842826543,0.954670618015114,0,0.609958401380546,0.756037385752609,0.418176592028937,0.218362563746178,0.674321731924103,0.661227645802687,0.785267825952089,0.388844919875379,3.10669656543463,0,0.448549638131936,0.330916980914195,0.388902376688095,0.774958940866387,0,0.704143431874524,0.781226309063701,0,0.241584120826006,0.288030006257865,0.316011120628178,0.405450430580328,0.410843828659309,0.129920822977795,0,0.198681354781265,0.240390899039938,0.147689527174577,0.302899349844443,0.15241361331,0,0.38983152295901,0,0.584384510907845,1.13365191807606,0,0.0897138566094757,0.167884616364078,1.35232715822533,4.31669693537719,1.64836461840539,0.857473516316263,2.00628841614145,0,0.460325236507177,0.572895513439397,0,0,0.755393897389701,0,0.900642406448441,2.26571204492102,1.55328093525546,0.207574695168353,0,0.170733605754134,0.243106717068294,0.209613162627982,0.551530525350042,0.666740183404846,0,1.28367683836726,0.758091635291392,0.50695859978048,0.754505365544305,0.280924522409647,0.512201219238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| |||
|short_description=p5@Sgk1 | |||
}} | |||
Revision as of 16:25, 12 September 2013
| Short description: | p5@Sgk1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Sgk1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2547 |
| Association with transcript: | 75bp_to_ENSMUST00000092673, NM_001161850, uc007eow.2_5end |
| EntrezGene: | Sgk1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| oligodendrocyte | 3.48e-07 | 6 |
| macroglial cell | 3.48e-07 | 6 |
| astrocyte | 3.48e-07 | 6 |
| Ontology term | p-value | n |
|---|---|---|
| trunk | 1.59e-12 | 90 |
| trunk region element | 8.87e-11 | 79 |
| mesenchyme | 2.46e-10 | 61 |
| entire embryonic mesenchyme | 2.46e-10 | 61 |
| subdivision of trunk | 1.14e-08 | 66 |
| anatomical conduit | 2.08e-07 | 122 |
| urinary system structure | 2.44e-07 | 18 |
| epithelial tube | 2.87e-07 | 47 |
| trunk mesenchyme | 2.97e-07 | 45 |
| compound organ | 4.97e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
