FFCP PHASE1:Mm9::chr7:36233782..36233821,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=30962|HGNC=|MCL_coexpression_id=12|UniProt=Q9QXA6|association_with_transcript=-234bp_to_ENSMUST00000118969_5end|description=CAGE_peak_5_at_Slc7a9_5end|id=chr7:36233782..36233821,+|ontology_enrichment_celltype=CL:0000239!7.91e-08!6;CL:0000677!7.91e-08!6;CL:0000212!7.91e-08!6;CL:0000584!7.91e-08!6|ontology_enrichment_celltype_v019_2=CL:0000239,3.15e-16,6;CL:0000677,3.15e-16,6;CL:0000584,3.15e-16,6;CL:0000075,8.27e-14,7;CL:0002563,1.40e-10,9;CL:0002251,1.40e-10,9;CL:0000682,8.29e-09,3;CL:0000066,2.33e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.24e-17!43;UBERON:0005409!4.55e-16!59;UBERON:0000344!6.83e-12!15;UBERON:0004923!1.62e-11!24;UBERON:0001242!6.66e-10!13;UBERON:0000060!6.66e-10!13;UBERON:0001262!6.66e-10!13;UBERON:0004786!6.66e-10!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.60e-49,31;UBERON:0005409,2.25e-30,47;UBERON:0000344,1.76e-24,15;UBERON:0001242,7.28e-20,13;UBERON:0001262,7.28e-20,13;UBERON:0004786,7.28e-20,13;UBERON:0004923,1.08e-16,24;UBERON:0002108,3.03e-11,4;UBERON:0001007,3.92e-11,116;UBERON:0001555,3.92e-11,116;UBERON:0007026,3.92e-11,116;UBERON:0004119,7.61e-11,118;UBERON:0000925,7.61e-11,118;UBERON:0006595,7.61e-11,118;UBERON:0003350,1.40e-10,9;UBERON:0004808,1.40e-10,9;UBERON:0001277,1.40e-10,9;UBERON:0004921,2.97e-09,114;UBERON:0000331,4.51e-09,3;UBERON:0002116,4.51e-09,3;UBERON:0001204,4.51e-09,3;UBERON:0001168,4.51e-09,3;UBERON:0000485,1.60e-08,11|phase1_expression=0,17.7977457896074,15.9249733786338,20.8700305801713,22.0394121176393,2.85394762250213,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,7.67963629408352,7.11168771308227,8.03924749761028,8.61523992318149,6.89507944594845,16.1519906537918,12.3494763582366,6.65191531965914,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0.150722640552623,0,0,2.71914464507811,0,0,0,0,0,0,0,0,9.45191104271788,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0.493679549740441,0.164167464079095,0,0,0,0,0,0,19.1642894130603,4.7601101999438,0.426576501070468,0,1.28867461322093,2.8235693447268,4.66993892074228,6.27744566171445,7.59246498471219,7.5761519173045,5.27803938480566,3.97912944082302,4.09424582950152,9.88701349519644,7.3486936957396,8.96135729644652,0,0.114248512609729,0,0.203651327845314,0.581857461502877,0.561086559122548,0.822074982615345,1.18088118383682,3.29697328466887,2.59134044235781,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.568474235311454,0,0,0.469380496577004,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.488660878060728,0,0,0.242780636154981,0,0.188605079755898,0,0,0.775284879504663,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.938686832254841,0.42366414172764,0,0,0,0,0,0,5.24665505933731,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.655087691238533,0.134864346384821,0,0,0,0,0,0,0.496375471371293,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0.618105171716683,0,0.505394423527595,0,0,0.280924522409647,0.256100609619477,0.34461281373368,0,0,0.192909220463705,0,0.441596760403192,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p5@Slc7a9}} | ||
|EntrezGene=30962 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q9QXA6 | |||
|association_with_transcript=-234bp_to_ENSMUST00000118969_5end | |||
|description=CAGE_peak_5_at_Slc7a9_5end | |||
|id=chr7:36233782..36233821,+ | |||
|ontology_enrichment_celltype=CL:0000239!7.91e-08!6;CL:0000677!7.91e-08!6;CL:0000212!7.91e-08!6;CL:0000584!7.91e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.15e-16,6;CL:0000677,3.15e-16,6;CL:0000584,3.15e-16,6;CL:0000075,8.27e-14,7;CL:0002563,1.40e-10,9;CL:0002251,1.40e-10,9;CL:0000682,8.29e-09,3;CL:0000066,2.33e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.24e-17!43;UBERON:0005409!4.55e-16!59;UBERON:0000344!6.83e-12!15;UBERON:0004923!1.62e-11!24;UBERON:0001242!6.66e-10!13;UBERON:0000060!6.66e-10!13;UBERON:0001262!6.66e-10!13;UBERON:0004786!6.66e-10!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.60e-49,31;UBERON:0005409,2.25e-30,47;UBERON:0000344,1.76e-24,15;UBERON:0001242,7.28e-20,13;UBERON:0001262,7.28e-20,13;UBERON:0004786,7.28e-20,13;UBERON:0004923,1.08e-16,24;UBERON:0002108,3.03e-11,4;UBERON:0001007,3.92e-11,116;UBERON:0001555,3.92e-11,116;UBERON:0007026,3.92e-11,116;UBERON:0004119,7.61e-11,118;UBERON:0000925,7.61e-11,118;UBERON:0006595,7.61e-11,118;UBERON:0003350,1.40e-10,9;UBERON:0004808,1.40e-10,9;UBERON:0001277,1.40e-10,9;UBERON:0004921,2.97e-09,114;UBERON:0000331,4.51e-09,3;UBERON:0002116,4.51e-09,3;UBERON:0001204,4.51e-09,3;UBERON:0001168,4.51e-09,3;UBERON:0000485,1.60e-08,11 | |||
|phase1_expression=0,17.7977457896074,15.9249733786338,20.8700305801713,22.0394121176393,2.85394762250213,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,7.67963629408352,7.11168771308227,8.03924749761028,8.61523992318149,6.89507944594845,16.1519906537918,12.3494763582366,6.65191531965914,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0.150722640552623,0,0,2.71914464507811,0,0,0,0,0,0,0,0,9.45191104271788,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0.493679549740441,0.164167464079095,0,0,0,0,0,0,19.1642894130603,4.7601101999438,0.426576501070468,0,1.28867461322093,2.8235693447268,4.66993892074228,6.27744566171445,7.59246498471219,7.5761519173045,5.27803938480566,3.97912944082302,4.09424582950152,9.88701349519644,7.3486936957396,8.96135729644652,0,0.114248512609729,0,0.203651327845314,0.581857461502877,0.561086559122548,0.822074982615345,1.18088118383682,3.29697328466887,2.59134044235781,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.568474235311454,0,0,0.469380496577004,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.488660878060728,0,0,0.242780636154981,0,0.188605079755898,0,0,0.775284879504663,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.938686832254841,0.42366414172764,0,0,0,0,0,0,5.24665505933731,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.655087691238533,0.134864346384821,0,0,0,0,0,0,0.496375471371293,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0.618105171716683,0,0.505394423527595,0,0,0.280924522409647,0.256100609619477,0.34461281373368,0,0,0.192909220463705,0,0.441596760403192,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p5@Slc7a9 | |||
}} |
Revision as of 13:23, 14 September 2013
Short description: | p5@Slc7a9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Slc7a9_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -234bp_to_ENSMUST00000118969_5end |
EntrezGene: | Slc7a9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.15e-16 | 6 |
gut absorptive cell | 3.15e-16 | 6 |
enterocyte | 3.15e-16 | 6 |
columnar/cuboidal epithelial cell | 8.27e-14 | 7 |
intestinal epithelial cell | 1.40e-10 | 9 |
epithelial cell of alimentary canal | 1.40e-10 | 9 |
M cell of gut | 8.29e-09 | 3 |
epithelial cell | 2.33e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.60e-49 | 31 |
gastrointestinal system | 2.25e-30 | 47 |
mucosa | 1.76e-24 | 15 |
intestinal mucosa | 7.28e-20 | 13 |
wall of intestine | 7.28e-20 | 13 |
gastrointestinal system mucosa | 7.28e-20 | 13 |
organ component layer | 1.08e-16 | 24 |
small intestine | 3.03e-11 | 4 |
digestive system | 3.92e-11 | 116 |
digestive tract | 3.92e-11 | 116 |
primitive gut | 3.92e-11 | 116 |
endoderm-derived structure | 7.61e-11 | 118 |
endoderm | 7.61e-11 | 118 |
presumptive endoderm | 7.61e-11 | 118 |
epithelium of mucosa | 1.40e-10 | 9 |
gastrointestinal system epithelium | 1.40e-10 | 9 |
intestinal epithelium | 1.40e-10 | 9 |
subdivision of digestive tract | 2.97e-09 | 114 |
ileal mucosa | 4.51e-09 | 3 |
ileum | 4.51e-09 | 3 |
mucosa of small intestine | 4.51e-09 | 3 |
wall of small intestine | 4.51e-09 | 3 |
simple columnar epithelium | 1.60e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.