FFCP PHASE1:Mm9::chr17:41016971..41016976,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:41016971..41016976,-|id=chr17:41016971..41016976,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000682,2.08e-21,3;CL:0000066,4.77e-13,25;CL:0000239,5.52e-11,6;CL:0000677,5.52e-11,6;CL:0000584,5.52e-11,6;CL:0000473,1.60e-09,7;CL:0000075,1.71e-09,7;CL:0002076,1.34e-07,15;CL:0002563,1.69e-07,9;CL:0002251,1.69e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.47e-11!59;UBERON:0000344!3.83e-10!15;UBERON:0000160!4.85e-10!43;UBERON:0001242!9.12e-08!13;UBERON:0000060!9.12e-08!13;UBERON:0001262!9.12e-08!13;UBERON:0004786!9.12e-08!13;UBERON:0004923!1.99e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.09e-16,15;UBERON:0001962,6.53e-15,2;UBERON:0001961,6.53e-15,2;UBERON:0001744,6.53e-15,2;UBERON:0002465,2.97e-10,3;UBERON:0004923,4.72e-10,24;UBERON:0001242,1.12e-08,13;UBERON:0001262,1.12e-08,13;UBERON:0004786,1.12e-08,13;UBERON:0003199,3.50e-08,1;UBERON:0000998,4.10e-08,1;UBERON:0007194,4.10e-08,1;UBERON:0006868,4.10e-08,1;UBERON:0003350,1.69e-07,9;UBERON:0004808,1.69e-07,9;UBERON:0001277,1.69e-07,9|phase1_expression=0.160148847104794,2.79180326111489,4.09499315450582,0.30246421130683,0,1.17515490338323,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,2.87986361028132,2.52350209173887,2.8711598205751,1.29228598847722,3.44753972297422,1.14014051673824,0.504060259519861,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0.771778308107841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0,0,0,0,1.73192832808971,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0.444756087689741,0,0.949058123089023,0.494096864172033,1.00534083520108,0.198956472041151,0,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0,0,0.704015124191131,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358855426437903,0.335769232728157,0.386379188064381,0,0.183151624267265,0.214368379079066,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:41016971..41016976,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:41016971..41016976,- | |||
|id=chr17:41016971..41016976,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.08e-21,3;CL:0000066,4.77e-13,25;CL:0000239,5.52e-11,6;CL:0000677,5.52e-11,6;CL:0000584,5.52e-11,6;CL:0000473,1.60e-09,7;CL:0000075,1.71e-09,7;CL:0002076,1.34e-07,15;CL:0002563,1.69e-07,9;CL:0002251,1.69e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.47e-11!59;UBERON:0000344!3.83e-10!15;UBERON:0000160!4.85e-10!43;UBERON:0001242!9.12e-08!13;UBERON:0000060!9.12e-08!13;UBERON:0001262!9.12e-08!13;UBERON:0004786!9.12e-08!13;UBERON:0004923!1.99e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.09e-16,15;UBERON:0001962,6.53e-15,2;UBERON:0001961,6.53e-15,2;UBERON:0001744,6.53e-15,2;UBERON:0002465,2.97e-10,3;UBERON:0004923,4.72e-10,24;UBERON:0001242,1.12e-08,13;UBERON:0001262,1.12e-08,13;UBERON:0004786,1.12e-08,13;UBERON:0003199,3.50e-08,1;UBERON:0000998,4.10e-08,1;UBERON:0007194,4.10e-08,1;UBERON:0006868,4.10e-08,1;UBERON:0003350,1.69e-07,9;UBERON:0004808,1.69e-07,9;UBERON:0001277,1.69e-07,9 | |||
|phase1_expression=0.160148847104794,2.79180326111489,4.09499315450582,0.30246421130683,0,1.17515490338323,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,2.87986361028132,2.52350209173887,2.8711598205751,1.29228598847722,3.44753972297422,1.14014051673824,0.504060259519861,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0.771778308107841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0,0,0,0,1.73192832808971,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0.444756087689741,0,0.949058123089023,0.494096864172033,1.00534083520108,0.198956472041151,0,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0,0,0.704015124191131,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358855426437903,0.335769232728157,0.386379188064381,0,0.183151624267265,0.214368379079066,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:41016971..41016976,- | |||
}} |
Revision as of 14:32, 13 September 2013
Short description: | p@chr17:41016971..41016976, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:41016971..41016976, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.08e-21 | 3 |
epithelial cell | 4.77e-13 | 25 |
brush border epithelial cell | 5.52e-11 | 6 |
gut absorptive cell | 5.52e-11 | 6 |
enterocyte | 5.52e-11 | 6 |
defensive cell | 1.60e-09 | 7 |
columnar/cuboidal epithelial cell | 1.71e-09 | 7 |
endo-epithelial cell | 1.34e-07 | 15 |
intestinal epithelial cell | 1.69e-07 | 9 |
epithelial cell of alimentary canal | 1.69e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.09e-16 | 15 |
gut-associated lymphoid tissue | 6.53e-15 | 2 |
mucosa-associated lymphoid tissue | 6.53e-15 | 2 |
lymphoid tissue | 6.53e-15 | 2 |
lymphoid system | 2.97e-10 | 3 |
organ component layer | 4.72e-10 | 24 |
intestinal mucosa | 1.12e-08 | 13 |
wall of intestine | 1.12e-08 | 13 |
gastrointestinal system mucosa | 1.12e-08 | 13 |
egg chamber | 3.50e-08 | 1 |
seminal vesicle | 4.10e-08 | 1 |
vesicular gland | 4.10e-08 | 1 |
seminal fluid secreting gland | 4.10e-08 | 1 |
epithelium of mucosa | 1.69e-07 | 9 |
gastrointestinal system epithelium | 1.69e-07 | 9 |
intestinal epithelium | 1.69e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.