FFCP PHASE1:Mm9::chr19:8040499..8040527,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=171405|HGNC=|MCL_coexpression_id=275|UniProt=Q76M72,Q687I4,Q76M71|association_with_transcript=0bp_to_ENSMUST00000075619,NM_134256,uc008gls.1,uc012bhz.1_5end|description=CAGE_peak_1_at_Slc22a27_5end|id=chr19:8040499..8040527,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!3.00e-16!49;UBERON:0005173!3.00e-16!49;UBERON:0002417!3.00e-16!49;UBERON:0000916!3.00e-16!49;UBERON:0009569!3.04e-12!66;UBERON:0002107!2.72e-11!22;UBERON:0007499!2.72e-11!22;UBERON:0006925!2.72e-11!22;UBERON:0009497!2.72e-11!22;UBERON:0000015!2.72e-11!22;UBERON:0002423!2.72e-11!22;UBERON:0006235!2.72e-11!22;UBERON:0008835!2.72e-11!22;UBERON:0003894!2.72e-11!22;UBERON:0004161!2.72e-11!22;UBERON:0008836!2.72e-11!22;UBERON:0009854!1.04e-10!23;UBERON:0009856!1.04e-10!23;UBERON:0002365!1.10e-09!25;UBERON:0002330!1.10e-09!25;UBERON:0002113!1.17e-08!14;UBERON:0003918!1.17e-08!14;UBERON:0005095!1.17e-08!14;UBERON:0007687!1.17e-08!14;UBERON:0005177!1.73e-08!85;UBERON:0006554!1.91e-07!16;UBERON:0001008!6.02e-07!17;UBERON:0002100!9.01e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0005172,5.61e-19,49;UBERON:0005173,5.61e-19,49;UBERON:0002417,5.61e-19,49;UBERON:0000916,5.61e-19,49;UBERON:0002107,5.69e-17,22;UBERON:0007499,5.69e-17,22;UBERON:0006925,5.69e-17,22;UBERON:0009497,5.69e-17,22;UBERON:0000015,5.69e-17,22;UBERON:0002423,5.69e-17,22;UBERON:0006235,5.69e-17,22;UBERON:0008835,5.69e-17,22;UBERON:0003894,5.69e-17,22;UBERON:0004161,5.69e-17,22;UBERON:0008836,5.69e-17,22;UBERON:0009854,3.37e-16,23;UBERON:0009856,3.37e-16,23;UBERON:0003104,6.02e-15,61;UBERON:0009142,6.02e-15,61;UBERON:0002365,7.70e-15,25;UBERON:0002330,7.70e-15,25;UBERON:0009569,1.07e-13,66;UBERON:0005177,3.51e-11,79;UBERON:0002113,4.14e-10,14;UBERON:0003918,4.14e-10,14;UBERON:0011143,4.14e-10,14;UBERON:0005095,4.14e-10,14;UBERON:0007687,4.14e-10,14;UBERON:0002100,1.29e-09,90;UBERON:0005256,7.30e-08,45;UBERON:0006554,7.57e-08,18;UBERON:0003914,1.72e-07,47;UBERON:0001008,1.98e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.896053774194671,1.82577746171277,0,0,0,0,0,0,0,0,0,0,7.30776830201984,0,0,0,0,0.230615497256059,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610953983535943,0.775809948670503,1.54298803758701,3.28829993046138,2.95220295959204,4.86696056308262,3.94870924549762,31.1275258441506,0,0,0,0,0,0,0,0,6.31491250332587,5.75072826109418,9.30352369171258,30.2676542921124,93.9593425963256,43.9523663128685,21.7099584613515,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.578574190077352,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421|short_description=p1@Slc22a27}} | ||
|EntrezGene=171405 | |||
|HGNC= | |||
|MCL_coexpression_id=275 | |||
|UniProt=Q76M72,Q687I4,Q76M71 | |||
|association_with_transcript=0bp_to_ENSMUST00000075619,NM_134256,uc008gls.1,uc012bhz.1_5end | |||
|description=CAGE_peak_1_at_Slc22a27_5end | |||
|id=chr19:8040499..8040527,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!3.00e-16!49;UBERON:0005173!3.00e-16!49;UBERON:0002417!3.00e-16!49;UBERON:0000916!3.00e-16!49;UBERON:0009569!3.04e-12!66;UBERON:0002107!2.72e-11!22;UBERON:0007499!2.72e-11!22;UBERON:0006925!2.72e-11!22;UBERON:0009497!2.72e-11!22;UBERON:0000015!2.72e-11!22;UBERON:0002423!2.72e-11!22;UBERON:0006235!2.72e-11!22;UBERON:0008835!2.72e-11!22;UBERON:0003894!2.72e-11!22;UBERON:0004161!2.72e-11!22;UBERON:0008836!2.72e-11!22;UBERON:0009854!1.04e-10!23;UBERON:0009856!1.04e-10!23;UBERON:0002365!1.10e-09!25;UBERON:0002330!1.10e-09!25;UBERON:0002113!1.17e-08!14;UBERON:0003918!1.17e-08!14;UBERON:0005095!1.17e-08!14;UBERON:0007687!1.17e-08!14;UBERON:0005177!1.73e-08!85;UBERON:0006554!1.91e-07!16;UBERON:0001008!6.02e-07!17;UBERON:0002100!9.01e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,5.61e-19,49;UBERON:0005173,5.61e-19,49;UBERON:0002417,5.61e-19,49;UBERON:0000916,5.61e-19,49;UBERON:0002107,5.69e-17,22;UBERON:0007499,5.69e-17,22;UBERON:0006925,5.69e-17,22;UBERON:0009497,5.69e-17,22;UBERON:0000015,5.69e-17,22;UBERON:0002423,5.69e-17,22;UBERON:0006235,5.69e-17,22;UBERON:0008835,5.69e-17,22;UBERON:0003894,5.69e-17,22;UBERON:0004161,5.69e-17,22;UBERON:0008836,5.69e-17,22;UBERON:0009854,3.37e-16,23;UBERON:0009856,3.37e-16,23;UBERON:0003104,6.02e-15,61;UBERON:0009142,6.02e-15,61;UBERON:0002365,7.70e-15,25;UBERON:0002330,7.70e-15,25;UBERON:0009569,1.07e-13,66;UBERON:0005177,3.51e-11,79;UBERON:0002113,4.14e-10,14;UBERON:0003918,4.14e-10,14;UBERON:0011143,4.14e-10,14;UBERON:0005095,4.14e-10,14;UBERON:0007687,4.14e-10,14;UBERON:0002100,1.29e-09,90;UBERON:0005256,7.30e-08,45;UBERON:0006554,7.57e-08,18;UBERON:0003914,1.72e-07,47;UBERON:0001008,1.98e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.896053774194671,1.82577746171277,0,0,0,0,0,0,0,0,0,0,7.30776830201984,0,0,0,0,0.230615497256059,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610953983535943,0.775809948670503,1.54298803758701,3.28829993046138,2.95220295959204,4.86696056308262,3.94870924549762,31.1275258441506,0,0,0,0,0,0,0,0,6.31491250332587,5.75072826109418,9.30352369171258,30.2676542921124,93.9593425963256,43.9523663128685,21.7099584613515,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.578574190077352,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p1@Slc22a27 | |||
}} |
Revision as of 18:26, 13 September 2013
Short description: | p1@Slc22a27 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc22a27_5end |
Coexpression cluster: | MCL_coexpression_mm9:275 |
Association with transcript: | 0bp_to_ENSMUST00000075619, NM_134256, uc008gls.1, uc012bhz.1_5end |
EntrezGene: | Slc22a27 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 5.61e-19 | 49 |
abdominal segment element | 5.61e-19 | 49 |
abdominal segment of trunk | 5.61e-19 | 49 |
abdomen | 5.61e-19 | 49 |
liver | 5.69e-17 | 22 |
epithelial sac | 5.69e-17 | 22 |
digestive gland | 5.69e-17 | 22 |
epithelium of foregut-midgut junction | 5.69e-17 | 22 |
anatomical boundary | 5.69e-17 | 22 |
hepatobiliary system | 5.69e-17 | 22 |
foregut-midgut junction | 5.69e-17 | 22 |
hepatic diverticulum | 5.69e-17 | 22 |
liver primordium | 5.69e-17 | 22 |
septum transversum | 5.69e-17 | 22 |
liver bud | 5.69e-17 | 22 |
digestive tract diverticulum | 3.37e-16 | 23 |
sac | 3.37e-16 | 23 |
mesenchyme | 6.02e-15 | 61 |
entire embryonic mesenchyme | 6.02e-15 | 61 |
exocrine gland | 7.70e-15 | 25 |
exocrine system | 7.70e-15 | 25 |
subdivision of trunk | 1.07e-13 | 66 |
trunk region element | 3.51e-11 | 79 |
kidney | 4.14e-10 | 14 |
kidney mesenchyme | 4.14e-10 | 14 |
upper urinary tract | 4.14e-10 | 14 |
kidney rudiment | 4.14e-10 | 14 |
kidney field | 4.14e-10 | 14 |
trunk | 1.29e-09 | 90 |
trunk mesenchyme | 7.30e-08 | 45 |
urinary system structure | 7.57e-08 | 18 |
epithelial tube | 1.72e-07 | 47 |
renal system | 1.98e-07 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.