FFCP PHASE1:Mm9::chr11:4136802..4136809,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18413|HGNC=|UniProt=P53347|association_with_transcript=14bp_to_NM_001013365,uc007hus.2_5end|description=CAGE_peak_3_at_Osm_5end|id=chr11:4136802..4136809,+|ontology_enrichment_celltype=CL:0000988!1.49e-22!32;CL:0002032!1.49e-22!32;CL:0000037!1.49e-22!32;CL:0000566!1.49e-22!32;CL:0000837!1.49e-22!32;CL:0002031!4.16e-15!25;CL:0002320!5.22e-15!46;CL:0000134!5.22e-15!46;CL:0000738!3.70e-14!17;CL:0002087!3.70e-14!17;CL:0000838!8.89e-13!12;CL:0000049!4.78e-12!19;CL:0000084!7.72e-12!11;CL:0000827!7.72e-12!11;CL:0000219!1.00e-11!54;CL:0000542!1.38e-11!13;CL:0000051!1.38e-11!13;CL:0000034!2.21e-09!97;CL:0000791!3.59e-09!9;CL:0000789!3.59e-09!9;CL:0002420!3.59e-09!9;CL:0002419!3.59e-09!9;CL:0000790!3.59e-09!9;CL:0000063!2.35e-08!66;CL:0000557!2.99e-08!7;CL:0000763!3.33e-08!16;CL:0000624!5.26e-08!8;CL:0000893!6.28e-08!6;CL:0002489!6.28e-08!6;CL:0000898!6.28e-08!6;CL:0000809!6.28e-08!6;CL:0000810!6.28e-08!6;CL:0000895!6.28e-08!6;CL:0000808!6.28e-08!6;CL:0000894!6.28e-08!6;CL:0000806!6.28e-08!6;CL:0000807!6.28e-08!6;CL:0000805!6.28e-08!6;CL:0002425!6.28e-08!6;CL:0002436!6.28e-08!6;CL:0002427!6.28e-08!6;CL:0002428!6.28e-08!6;CL:0002429!6.28e-08!6;CL:0002433!6.28e-08!6;CL:0002431!6.28e-08!6;CL:0002432!6.28e-08!6;CL:0000723!7.18e-08!91;CL:0000048!7.18e-08!91|ontology_enrichment_celltype_v019_2=CL:0000049,1.13e-09,19;CL:0000988,1.66e-09,32;CL:0002032,1.66e-09,32;CL:0000037,1.66e-09,32;CL:0000837,1.66e-09,32;CL:0000034,1.45e-08,97;CL:0000557,2.95e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,7.36e-17,3;DOID:4045,7.36e-17,3;DOID:0050686,1.08e-08,6|ontology_enrichment_uberon=UBERON:0002390!2.91e-15!45;UBERON:0003061!2.91e-15!45;UBERON:0002193!3.17e-15!48;UBERON:0002384!5.22e-15!46;UBERON:0002371!4.44e-10!16;UBERON:0002405!3.42e-08!70;UBERON:0002204!5.00e-08!32;UBERON:0001474!5.92e-08!22;UBERON:0004765!5.92e-08!22;UBERON:0001434!5.92e-08!22;UBERON:0002370!5.26e-07!23;UBERON:0000974!5.26e-07!23;UBERON:0004807!5.26e-07!23;UBERON:0005058!5.26e-07!23;UBERON:0003351!5.26e-07!23;UBERON:0009113!5.26e-07!23;UBERON:0003295!5.26e-07!23;UBERON:0009722!5.26e-07!23;UBERON:0005562!5.26e-07!23;UBERON:0007690!5.26e-07!23;UBERON:0004177!5.50e-07!29|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,2.32421982194837,0.281577444303333,0.468129052643987,0.171217968225505,0.239316476986009,0.171200729931206,0.174840804837995,0.666219523631325,0.809901069559304,0.699561878128147,0.157731082679119,0,0,0,0.992909512008853,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.393012183581,10.9386948233332,6.28228492768558,12.3528612486513,17.0761371239611,6.311634589405,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0.599200221036809,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,10.0644704584973,8.99854096490112,7.62421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.02213187313235,7.20574139921202,5.96743348730745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.170870880797853,0,0.370389054739423,0,0,0,2.88963330989554,3.07893195112048,1.52019971184866,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0.608175645870493,0.308132871494482,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p3@Osm}} | ||
|EntrezGene=18413 | |||
|HGNC= | |||
|UniProt=P53347 | |||
|association_with_transcript=14bp_to_NM_001013365,uc007hus.2_5end | |||
|description=CAGE_peak_3_at_Osm_5end | |||
|id=chr11:4136802..4136809,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.49e-22!32;CL:0002032!1.49e-22!32;CL:0000037!1.49e-22!32;CL:0000566!1.49e-22!32;CL:0000837!1.49e-22!32;CL:0002031!4.16e-15!25;CL:0002320!5.22e-15!46;CL:0000134!5.22e-15!46;CL:0000738!3.70e-14!17;CL:0002087!3.70e-14!17;CL:0000838!8.89e-13!12;CL:0000049!4.78e-12!19;CL:0000084!7.72e-12!11;CL:0000827!7.72e-12!11;CL:0000219!1.00e-11!54;CL:0000542!1.38e-11!13;CL:0000051!1.38e-11!13;CL:0000034!2.21e-09!97;CL:0000791!3.59e-09!9;CL:0000789!3.59e-09!9;CL:0002420!3.59e-09!9;CL:0002419!3.59e-09!9;CL:0000790!3.59e-09!9;CL:0000063!2.35e-08!66;CL:0000557!2.99e-08!7;CL:0000763!3.33e-08!16;CL:0000624!5.26e-08!8;CL:0000893!6.28e-08!6;CL:0002489!6.28e-08!6;CL:0000898!6.28e-08!6;CL:0000809!6.28e-08!6;CL:0000810!6.28e-08!6;CL:0000895!6.28e-08!6;CL:0000808!6.28e-08!6;CL:0000894!6.28e-08!6;CL:0000806!6.28e-08!6;CL:0000807!6.28e-08!6;CL:0000805!6.28e-08!6;CL:0002425!6.28e-08!6;CL:0002436!6.28e-08!6;CL:0002427!6.28e-08!6;CL:0002428!6.28e-08!6;CL:0002429!6.28e-08!6;CL:0002433!6.28e-08!6;CL:0002431!6.28e-08!6;CL:0002432!6.28e-08!6;CL:0000723!7.18e-08!91;CL:0000048!7.18e-08!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.13e-09,19;CL:0000988,1.66e-09,32;CL:0002032,1.66e-09,32;CL:0000037,1.66e-09,32;CL:0000837,1.66e-09,32;CL:0000034,1.45e-08,97;CL:0000557,2.95e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.36e-17,3;DOID:4045,7.36e-17,3;DOID:0050686,1.08e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.91e-15!45;UBERON:0003061!2.91e-15!45;UBERON:0002193!3.17e-15!48;UBERON:0002384!5.22e-15!46;UBERON:0002371!4.44e-10!16;UBERON:0002405!3.42e-08!70;UBERON:0002204!5.00e-08!32;UBERON:0001474!5.92e-08!22;UBERON:0004765!5.92e-08!22;UBERON:0001434!5.92e-08!22;UBERON:0002370!5.26e-07!23;UBERON:0000974!5.26e-07!23;UBERON:0004807!5.26e-07!23;UBERON:0005058!5.26e-07!23;UBERON:0003351!5.26e-07!23;UBERON:0009113!5.26e-07!23;UBERON:0003295!5.26e-07!23;UBERON:0009722!5.26e-07!23;UBERON:0005562!5.26e-07!23;UBERON:0007690!5.26e-07!23;UBERON:0004177!5.50e-07!29 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,2.32421982194837,0.281577444303333,0.468129052643987,0.171217968225505,0.239316476986009,0.171200729931206,0.174840804837995,0.666219523631325,0.809901069559304,0.699561878128147,0.157731082679119,0,0,0,0.992909512008853,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.393012183581,10.9386948233332,6.28228492768558,12.3528612486513,17.0761371239611,6.311634589405,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0.599200221036809,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,10.0644704584973,8.99854096490112,7.62421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.02213187313235,7.20574139921202,5.96743348730745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.170870880797853,0,0.370389054739423,0,0,0,2.88963330989554,3.07893195112048,1.52019971184866,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0.608175645870493,0.308132871494482,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p3@Osm | |||
}} |
Revision as of 19:38, 12 September 2013
Short description: | p3@Osm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Osm_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_NM_001013365, uc007hus.2_5end |
EntrezGene: | Osm |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.13e-09 | 19 |
hematopoietic cell | 1.66e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.66e-09 | 32 |
hematopoietic stem cell | 1.66e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.66e-09 | 32 |
stem cell | 1.45e-08 | 97 |
granulocyte monocyte progenitor cell | 2.95e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.36e-17 | 3 |
muscle cancer | 7.36e-17 | 3 |
organ system cancer | 1.08e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.