FFCP PHASE1:Mm9::chr9:108756891..108756902,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=74|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:108756891..108756902,-|id=chr9:108756891..108756902,-|ontology_enrichment_celltype=CL:0000075!1.88e-07!7;CL:0000239!2.12e-07!6;CL:0000677!2.12e-07!6;CL:0000212!2.12e-07!6;CL:0000584!2.12e-07!6;CL:0002563!2.22e-07!9;CL:0002251!2.22e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,1.99e-25,6;CL:0000677,1.99e-25,6;CL:0000584,1.99e-25,6;CL:0000075,8.40e-22,7;CL:0002563,5.87e-17,9;CL:0002251,5.87e-17,9;CL:0002076,3.79e-10,15;CL:0000066,2.20e-08,25;CL:0000223,1.41e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.17e-07!15;UBERON:0003350!2.22e-07!9;UBERON:0004808!2.22e-07!9;UBERON:0001277!2.22e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.12e-25,15;UBERON:0000160,4.36e-22,31;UBERON:0003350,5.87e-17,9;UBERON:0004808,5.87e-17,9;UBERON:0001277,5.87e-17,9;UBERON:0001242,1.01e-16,13;UBERON:0001262,1.01e-16,13;UBERON:0004786,1.01e-16,13;UBERON:0004923,2.35e-15,24;UBERON:0005409,3.96e-14,47;UBERON:0000485,7.22e-14,11;UBERON:0001962,1.64e-12,2;UBERON:0001961,1.64e-12,2;UBERON:0001744,1.64e-12,2;UBERON:0002465,1.21e-08,3;UBERON:0001007,4.14e-07,116;UBERON:0001555,4.14e-07,116;UBERON:0007026,4.14e-07,116;UBERON:0004119,5.85e-07,118;UBERON:0000925,5.85e-07,118;UBERON:0006595,5.85e-07,118;UBERON:0003199,7.23e-07,1|phase1_expression=0,4.88565570695105,4.54999239389536,4.23449895829562,5.00895729946347,1.6787927191189,0.700837921786577,0.129123323441576,0.703943610758334,0.936258105287974,0.171217968225505,0.319088635981346,0,0.0874204024189974,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,2.3998863419011,1.37645568640302,0,0.86152399231815,1.50829862880122,0,0,0,0.635030673459631,0.61506478758457,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0.725362142011344,0.336093799142464,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0.452167921657868,0.117588707135705,0,0,0.578397427679647,0,0,0.441683036920787,0,0,0.292780797011547,0,1.53274233125155,0,0,0.127070227073065,0.449371918214468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0.32833492815819,0.56748166682099,0.438599962275997,0.219550115291051,0.536825675041487,0,0,16.5209391491899,2.11560453330835,0,0,0,0,0,0,1.42358718463353,0,0.251335208800269,0,0.19496408711912,0,0.432276099749388,2.98711909881551,0,0,0,0,0,0,0,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0.283076530788832,0.404810701674894,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,1.45740418314925,0,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0.100826185136841,0,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0.824171801606613,0,0.342869252385415,0,0.476872379894642,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0,0,0,0,0,0.233931608445408,0,0,0,0.463735671240843|short_description=p@chr9:108756891..108756902,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:108756891..108756902,- | |||
|id=chr9:108756891..108756902,- | |||
|ontology_enrichment_celltype=CL:0000075!1.88e-07!7;CL:0000239!2.12e-07!6;CL:0000677!2.12e-07!6;CL:0000212!2.12e-07!6;CL:0000584!2.12e-07!6;CL:0002563!2.22e-07!9;CL:0002251!2.22e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.99e-25,6;CL:0000677,1.99e-25,6;CL:0000584,1.99e-25,6;CL:0000075,8.40e-22,7;CL:0002563,5.87e-17,9;CL:0002251,5.87e-17,9;CL:0002076,3.79e-10,15;CL:0000066,2.20e-08,25;CL:0000223,1.41e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.17e-07!15;UBERON:0003350!2.22e-07!9;UBERON:0004808!2.22e-07!9;UBERON:0001277!2.22e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.12e-25,15;UBERON:0000160,4.36e-22,31;UBERON:0003350,5.87e-17,9;UBERON:0004808,5.87e-17,9;UBERON:0001277,5.87e-17,9;UBERON:0001242,1.01e-16,13;UBERON:0001262,1.01e-16,13;UBERON:0004786,1.01e-16,13;UBERON:0004923,2.35e-15,24;UBERON:0005409,3.96e-14,47;UBERON:0000485,7.22e-14,11;UBERON:0001962,1.64e-12,2;UBERON:0001961,1.64e-12,2;UBERON:0001744,1.64e-12,2;UBERON:0002465,1.21e-08,3;UBERON:0001007,4.14e-07,116;UBERON:0001555,4.14e-07,116;UBERON:0007026,4.14e-07,116;UBERON:0004119,5.85e-07,118;UBERON:0000925,5.85e-07,118;UBERON:0006595,5.85e-07,118;UBERON:0003199,7.23e-07,1 | |||
|phase1_expression=0,4.88565570695105,4.54999239389536,4.23449895829562,5.00895729946347,1.6787927191189,0.700837921786577,0.129123323441576,0.703943610758334,0.936258105287974,0.171217968225505,0.319088635981346,0,0.0874204024189974,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,2.3998863419011,1.37645568640302,0,0.86152399231815,1.50829862880122,0,0,0,0.635030673459631,0.61506478758457,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0.725362142011344,0.336093799142464,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0.452167921657868,0.117588707135705,0,0,0.578397427679647,0,0,0.441683036920787,0,0,0.292780797011547,0,1.53274233125155,0,0,0.127070227073065,0.449371918214468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0.32833492815819,0.56748166682099,0.438599962275997,0.219550115291051,0.536825675041487,0,0,16.5209391491899,2.11560453330835,0,0,0,0,0,0,1.42358718463353,0,0.251335208800269,0,0.19496408711912,0,0.432276099749388,2.98711909881551,0,0,0,0,0,0,0,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0.283076530788832,0.404810701674894,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,1.45740418314925,0,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0.100826185136841,0,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0.824171801606613,0,0.342869252385415,0,0.476872379894642,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0,0,0,0,0,0.233931608445408,0,0,0,0.463735671240843 | |||
|short_description=p@chr9:108756891..108756902,- | |||
}} |
Revision as of 16:51, 14 September 2013
Short description: | p@chr9:108756891..108756902, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:108756891..108756902, - |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.99e-25 | 6 |
gut absorptive cell | 1.99e-25 | 6 |
enterocyte | 1.99e-25 | 6 |
columnar/cuboidal epithelial cell | 8.40e-22 | 7 |
intestinal epithelial cell | 5.87e-17 | 9 |
epithelial cell of alimentary canal | 5.87e-17 | 9 |
endo-epithelial cell | 3.79e-10 | 15 |
epithelial cell | 2.20e-08 | 25 |
endodermal cell | 1.41e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.12e-25 | 15 |
intestine | 4.36e-22 | 31 |
epithelium of mucosa | 5.87e-17 | 9 |
gastrointestinal system epithelium | 5.87e-17 | 9 |
intestinal epithelium | 5.87e-17 | 9 |
intestinal mucosa | 1.01e-16 | 13 |
wall of intestine | 1.01e-16 | 13 |
gastrointestinal system mucosa | 1.01e-16 | 13 |
organ component layer | 2.35e-15 | 24 |
gastrointestinal system | 3.96e-14 | 47 |
simple columnar epithelium | 7.22e-14 | 11 |
gut-associated lymphoid tissue | 1.64e-12 | 2 |
mucosa-associated lymphoid tissue | 1.64e-12 | 2 |
lymphoid tissue | 1.64e-12 | 2 |
lymphoid system | 1.21e-08 | 3 |
digestive system | 4.14e-07 | 116 |
digestive tract | 4.14e-07 | 116 |
primitive gut | 4.14e-07 | 116 |
endoderm-derived structure | 5.85e-07 | 118 |
endoderm | 5.85e-07 | 118 |
presumptive endoderm | 5.85e-07 | 118 |
egg chamber | 7.23e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.