FFCP PHASE1:Mm9::chr19:39135488..39135505,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72303|HGNC=|MCL_coexpression_id=74|UniProt=Q148B1,Q9CVC8,Q5GLZ0|association_with_transcript=0bp_to_ENSMUST00000087236,NM_028191,uc008hjv.2_5end|description=CAGE_peak_1_at_Cyp2c65_5end|id=chr19:39135488..39135505,+|ontology_enrichment_celltype=CL:0002563!8.16e-10!9;CL:0002251!8.16e-10!9;CL:0000239!5.28e-07!6;CL:0000677!5.28e-07!6;CL:0000212!5.28e-07!6;CL:0000584!5.28e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,1.52e-14,9;CL:0002251,1.52e-14,9;CL:0000239,3.92e-10,6;CL:0000677,3.92e-10,6;CL:0000584,3.92e-10,6;CL:0000075,1.41e-08,7;CL:0002076,5.17e-08,15;CL:0000066,1.10e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.02e-25!59;UBERON:0000160!2.11e-20!43;UBERON:0000344!4.85e-16!15;UBERON:0001242!7.11e-14!13;UBERON:0000060!7.11e-14!13;UBERON:0001262!7.11e-14!13;UBERON:0004786!7.11e-14!13;UBERON:0001007!7.43e-11!128;UBERON:0001555!7.43e-11!128;UBERON:0007026!7.43e-11!128;UBERON:0004119!1.86e-10!130;UBERON:0000925!1.86e-10!130;UBERON:0006595!1.86e-10!130;UBERON:0003350!8.16e-10!9;UBERON:0004808!8.16e-10!9;UBERON:0001277!8.16e-10!9;UBERON:0004921!1.20e-09!126;UBERON:0004185!1.20e-09!126;UBERON:0004923!3.35e-08!24;UBERON:0000485!1.39e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.14e-50,47;UBERON:0000160,1.26e-44,31;UBERON:0000344,2.34e-24,15;UBERON:0001242,6.12e-21,13;UBERON:0001262,6.12e-21,13;UBERON:0004786,6.12e-21,13;UBERON:0001007,2.98e-18,116;UBERON:0001555,2.98e-18,116;UBERON:0007026,2.98e-18,116;UBERON:0004119,9.00e-18,118;UBERON:0000925,9.00e-18,118;UBERON:0006595,9.00e-18,118;UBERON:0004921,3.36e-16,114;UBERON:0003350,1.52e-14,9;UBERON:0004808,1.52e-14,9;UBERON:0001277,1.52e-14,9;UBERON:0004923,9.05e-14,24;UBERON:0000485,1.43e-11,11;UBERON:0000945,3.78e-08,16;UBERON:0010039,3.78e-08,16;UBERON:0002108,1.26e-07,4|phase1_expression=0,18.1467211972468,17.2899710968024,81.9678012641509,78.6406296015765,6.04365378882803,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,88.4758098047539,43.128944840628,27.563134277521,22.3996238002719,18.0995835456147,58.1471663536504,48.8938451734266,1.10865255327652,0,0,0,27.4409038763711,26.9300125480758,17.5585646385637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2746636762055,0,0,0,0,0,0,0,0,0,0,27.4041311325744,0,0,0,0,0.230615497256059,0,0,0.753999547978053,0,0,0,0,0,0,158.432997035404,0,0.209446706813455,238.341432509616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,1391.72391392776,80.3929722657175,0,0.696710015581316,6.05677068213839,8.67239155880373,9.33987784148455,14.0766963323294,179.84651432537,40.5159428621067,26.138861715228,36.6079908555717,26.5151158482003,142.912285976021,262.175454498004,357.458585491589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0.339490171550376,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,7.75284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.9913067266895,0,0,0,0,0,0,0,0,0,0,251.078372537975,0.158167996790568,1.62655573701479,5.29226170026826,14.2180041289839,43.2357876217432,106.947426683163,94.6382068055096,145.53630374312,385.734160516376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,7.9355634265324,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.618105171716683,0.320919209591815,0.758091635291392,0.760437899670719,0.754505365544305,0.37456602987953,0.640251524048693,0.689225627467359,0.476293691283074,0.347652977834566,0.964546102318525,0,0,1.02860775715625,0.354951612318675,0.476872379894642,0.872078499793971,0.846984423737976,0.930760686808441,0.365855945745545,0.263069711437843,0.814824683075171,0,0.355905054372522,0.985044823755635,0,1.39443157067369,0.578719832943424,0,2.10538447600868,3.22306581072447,0,0,0|short_description=p1@Cyp2c65}} | ||
|EntrezGene=72303 | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|UniProt=Q148B1,Q9CVC8,Q5GLZ0 | |||
|association_with_transcript=0bp_to_ENSMUST00000087236,NM_028191,uc008hjv.2_5end | |||
|description=CAGE_peak_1_at_Cyp2c65_5end | |||
|id=chr19:39135488..39135505,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.16e-10!9;CL:0002251!8.16e-10!9;CL:0000239!5.28e-07!6;CL:0000677!5.28e-07!6;CL:0000212!5.28e-07!6;CL:0000584!5.28e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.52e-14,9;CL:0002251,1.52e-14,9;CL:0000239,3.92e-10,6;CL:0000677,3.92e-10,6;CL:0000584,3.92e-10,6;CL:0000075,1.41e-08,7;CL:0002076,5.17e-08,15;CL:0000066,1.10e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.02e-25!59;UBERON:0000160!2.11e-20!43;UBERON:0000344!4.85e-16!15;UBERON:0001242!7.11e-14!13;UBERON:0000060!7.11e-14!13;UBERON:0001262!7.11e-14!13;UBERON:0004786!7.11e-14!13;UBERON:0001007!7.43e-11!128;UBERON:0001555!7.43e-11!128;UBERON:0007026!7.43e-11!128;UBERON:0004119!1.86e-10!130;UBERON:0000925!1.86e-10!130;UBERON:0006595!1.86e-10!130;UBERON:0003350!8.16e-10!9;UBERON:0004808!8.16e-10!9;UBERON:0001277!8.16e-10!9;UBERON:0004921!1.20e-09!126;UBERON:0004185!1.20e-09!126;UBERON:0004923!3.35e-08!24;UBERON:0000485!1.39e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.14e-50,47;UBERON:0000160,1.26e-44,31;UBERON:0000344,2.34e-24,15;UBERON:0001242,6.12e-21,13;UBERON:0001262,6.12e-21,13;UBERON:0004786,6.12e-21,13;UBERON:0001007,2.98e-18,116;UBERON:0001555,2.98e-18,116;UBERON:0007026,2.98e-18,116;UBERON:0004119,9.00e-18,118;UBERON:0000925,9.00e-18,118;UBERON:0006595,9.00e-18,118;UBERON:0004921,3.36e-16,114;UBERON:0003350,1.52e-14,9;UBERON:0004808,1.52e-14,9;UBERON:0001277,1.52e-14,9;UBERON:0004923,9.05e-14,24;UBERON:0000485,1.43e-11,11;UBERON:0000945,3.78e-08,16;UBERON:0010039,3.78e-08,16;UBERON:0002108,1.26e-07,4 | |||
|phase1_expression=0,18.1467211972468,17.2899710968024,81.9678012641509,78.6406296015765,6.04365378882803,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,88.4758098047539,43.128944840628,27.563134277521,22.3996238002719,18.0995835456147,58.1471663536504,48.8938451734266,1.10865255327652,0,0,0,27.4409038763711,26.9300125480758,17.5585646385637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2746636762055,0,0,0,0,0,0,0,0,0,0,27.4041311325744,0,0,0,0,0.230615497256059,0,0,0.753999547978053,0,0,0,0,0,0,158.432997035404,0,0.209446706813455,238.341432509616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,1391.72391392776,80.3929722657175,0,0.696710015581316,6.05677068213839,8.67239155880373,9.33987784148455,14.0766963323294,179.84651432537,40.5159428621067,26.138861715228,36.6079908555717,26.5151158482003,142.912285976021,262.175454498004,357.458585491589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0.339490171550376,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,7.75284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.9913067266895,0,0,0,0,0,0,0,0,0,0,251.078372537975,0.158167996790568,1.62655573701479,5.29226170026826,14.2180041289839,43.2357876217432,106.947426683163,94.6382068055096,145.53630374312,385.734160516376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,7.9355634265324,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.618105171716683,0.320919209591815,0.758091635291392,0.760437899670719,0.754505365544305,0.37456602987953,0.640251524048693,0.689225627467359,0.476293691283074,0.347652977834566,0.964546102318525,0,0,1.02860775715625,0.354951612318675,0.476872379894642,0.872078499793971,0.846984423737976,0.930760686808441,0.365855945745545,0.263069711437843,0.814824683075171,0,0.355905054372522,0.985044823755635,0,1.39443157067369,0.578719832943424,0,2.10538447600868,3.22306581072447,0,0,0 | |||
|short_description=p1@Cyp2c65 | |||
}} |
Revision as of 17:32, 13 September 2013
Short description: | p1@Cyp2c65 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cyp2c65_5end |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | 0bp_to_ENSMUST00000087236, NM_028191, uc008hjv.2_5end |
EntrezGene: | Cyp2c65 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.52e-14 | 9 |
epithelial cell of alimentary canal | 1.52e-14 | 9 |
brush border epithelial cell | 3.92e-10 | 6 |
gut absorptive cell | 3.92e-10 | 6 |
enterocyte | 3.92e-10 | 6 |
columnar/cuboidal epithelial cell | 1.41e-08 | 7 |
endo-epithelial cell | 5.17e-08 | 15 |
epithelial cell | 1.10e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.14e-50 | 47 |
intestine | 1.26e-44 | 31 |
mucosa | 2.34e-24 | 15 |
intestinal mucosa | 6.12e-21 | 13 |
wall of intestine | 6.12e-21 | 13 |
gastrointestinal system mucosa | 6.12e-21 | 13 |
digestive system | 2.98e-18 | 116 |
digestive tract | 2.98e-18 | 116 |
primitive gut | 2.98e-18 | 116 |
endoderm-derived structure | 9.00e-18 | 118 |
endoderm | 9.00e-18 | 118 |
presumptive endoderm | 9.00e-18 | 118 |
subdivision of digestive tract | 3.36e-16 | 114 |
epithelium of mucosa | 1.52e-14 | 9 |
gastrointestinal system epithelium | 1.52e-14 | 9 |
intestinal epithelium | 1.52e-14 | 9 |
organ component layer | 9.05e-14 | 24 |
simple columnar epithelium | 1.43e-11 | 11 |
stomach | 3.78e-08 | 16 |
food storage organ | 3.78e-08 | 16 |
small intestine | 1.26e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.