FFCP PHASE1:Mm9::chr8:60132427..60132474,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2635|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:60132427..60132474,-|id=chr8:60132427..60132474,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.16e-25!59;UBERON:0000160!4.02e-20!43;UBERON:0001007!2.54e-15!128;UBERON:0001555!2.54e-15!128;UBERON:0007026!2.54e-15!128;UBERON:0004119!7.57e-15!130;UBERON:0000925!7.57e-15!130;UBERON:0006595!7.57e-15!130;UBERON:0004921!1.27e-14!126;UBERON:0004185!1.27e-14!126;UBERON:0002108!1.43e-09!16;UBERON:0001045!2.49e-08!13;UBERON:0002075!8.72e-08!19;UBERON:0001264!9.38e-08!12;UBERON:0003922!9.38e-08!12;UBERON:0002114!9.38e-08!12;UBERON:0003923!9.38e-08!12;UBERON:0003924!9.38e-08!12;UBERON:0003921!9.38e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.28e-22,47;UBERON:0000160,3.82e-19,31;UBERON:0001007,1.23e-11,116;UBERON:0001555,1.23e-11,116;UBERON:0007026,1.23e-11,116;UBERON:0004119,3.90e-11,118;UBERON:0000925,3.90e-11,118;UBERON:0006595,3.90e-11,118;UBERON:0004921,7.38e-11,114;UBERON:0001264,4.55e-10,12;UBERON:0002075,9.87e-08,19;UBERON:0000344,1.34e-07,15|phase1_expression=0.160148847104794,0.697950815278722,0,5.44435580352294,3.00537437967808,4.19698179779725,1.40167584357315,0.516493293766305,0.140788722151667,0,0,0.159544317990673,0.856003649656029,0.786783621770977,0.333109761815663,0.202475267389826,0,0.315462165358238,0.548457734422955,0.84877930359606,0.17008658030214,0.695036658406197,0.522399578277871,1.75991665072747,1.60586496747019,1.14846392823004,1.7230479846363,0.215471232685889,5.51067916423484,4.78857246543868,1.33038306393183,0,0,0,5.19932915552294,2.99222361645286,5.10423390655923,0.418531630736908,0,0,0,0.683045484958446,0,0.125896817975577,0.304130793658544,0,0.782391344348039,0,0,0,0,0,0.503347818173209,2.90144856804538,1.34437519656986,0.514518872071894,0.286533439938757,0,0,0,0.633831403506179,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0,0,0,0.638436690425939,0.307213066512487,0,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.30559649555362,0,0.284743361598206,0.372798891650601,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,1.29894624606728,0.760079596425296,0.505524445014783,0.91347103775248,2.33044095282455,1.7813056687779,0.693941307064543,1.21786191324856,0.691846491768175,0.753613202763113,0.940709657085638,1.13099932196708,0,0.578397427679647,3.5384422077995,0.485300549842228,1.32504911076236,0.969750506270444,7.45567044872489,0.585561594023094,0,6.89734049063197,0.359445373517761,0.599902730993408,0.127070227073065,0.449371918214468,0,0.628271760564322,0,1.02286182932132,0.41557608911912,0.162241263067758,0.203678727700633,0.622034853050465,0,4.20883711772948,0.260240885925407,0.229902104433473,0.360124259610698,0,0.136072998302656,0.12811372028485,0.0937017245597288,1.81092359517311,0.431135985865684,0.189106080167819,0.351902248327898,0.657587197282725,0.278047249225598,1.0447564995665,0.823128545631774,0.398068533636986,0,1.02939162845886,0.568326998791185,0,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,0,0.930135779001631,0,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0.439100230582101,0.402619256281115,0.210289948564127,0.102904612379284,4.95628174475697,1.05780226665418,0.426576501070468,1.16118335930219,2.96395161040815,4.63872106633688,8.45036566610507,7.60902504450237,6.16887780007865,6.91735609840846,9.0480675168097,8.55512829776949,9.94316844307513,8.98819408654222,10.3746263939853,8.36393347668342,0.189667900953082,0.913988100877831,2.25415471346161,1.22190796707189,1.35766741017338,0.561086559122548,0.948548056863859,0.295220295959204,0.784993639206874,0.370191491765402,0.296452627087149,0.333690211432188,0.393117990226406,0.449724224769707,0.608580364165509,0,0.25462585178142,0.575392274901621,0.486405680325106,0.549122826376163,0,0.744281895337007,0.312037673114561,0.505157755894224,0,0.482443521363367,0.739012760666419,0.947457058852424,0.325929952884052,0.339490171550376,1.40814148973101,0.502518772325447,0.476087281772027,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,0.327726629431476,1.03610989119537,0.433947175744535,3.01582567878545,2.17562273527484,0.491764273019036,2.20749397043786,0.321101179975584,0.35163505977661,0.163934945376675,0,0.315508219416257,0.780877488593277,0.215423397732799,0.238968797952552,0.222798674082394,0,1.21443210502468,0.292255857911312,0,0.642642632843614,1.13552068166615,0.534196811001766,0.488660878060728,1.64970122972535,15.9294166007955,0.728341908464944,1.51161778482376,8.48722858901541,10.6308681437078,8.30074899448604,3.87642439752332,6.5436071305951,9.26893183800275,12.6414703174326,27.4088382294997,12.3762651897824,0,0.36012218806262,0.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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2635 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:60132427..60132474,- | |||
|id=chr8:60132427..60132474,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.16e-25!59;UBERON:0000160!4.02e-20!43;UBERON:0001007!2.54e-15!128;UBERON:0001555!2.54e-15!128;UBERON:0007026!2.54e-15!128;UBERON:0004119!7.57e-15!130;UBERON:0000925!7.57e-15!130;UBERON:0006595!7.57e-15!130;UBERON:0004921!1.27e-14!126;UBERON:0004185!1.27e-14!126;UBERON:0002108!1.43e-09!16;UBERON:0001045!2.49e-08!13;UBERON:0002075!8.72e-08!19;UBERON:0001264!9.38e-08!12;UBERON:0003922!9.38e-08!12;UBERON:0002114!9.38e-08!12;UBERON:0003923!9.38e-08!12;UBERON:0003924!9.38e-08!12;UBERON:0003921!9.38e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.28e-22,47;UBERON:0000160,3.82e-19,31;UBERON:0001007,1.23e-11,116;UBERON:0001555,1.23e-11,116;UBERON:0007026,1.23e-11,116;UBERON:0004119,3.90e-11,118;UBERON:0000925,3.90e-11,118;UBERON:0006595,3.90e-11,118;UBERON:0004921,7.38e-11,114;UBERON:0001264,4.55e-10,12;UBERON:0002075,9.87e-08,19;UBERON:0000344,1.34e-07,15 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0,5.44435580352294,3.00537437967808,4.19698179779725,1.40167584357315,0.516493293766305,0.140788722151667,0,0,0.159544317990673,0.856003649656029,0.786783621770977,0.333109761815663,0.202475267389826,0,0.315462165358238,0.548457734422955,0.84877930359606,0.17008658030214,0.695036658406197,0.522399578277871,1.75991665072747,1.60586496747019,1.14846392823004,1.7230479846363,0.215471232685889,5.51067916423484,4.78857246543868,1.33038306393183,0,0,0,5.19932915552294,2.99222361645286,5.10423390655923,0.418531630736908,0,0,0,0.683045484958446,0,0.125896817975577,0.304130793658544,0,0.782391344348039,0,0,0,0,0,0.503347818173209,2.90144856804538,1.34437519656986,0.514518872071894,0.286533439938757,0,0,0,0.633831403506179,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0,0,0,0.638436690425939,0.307213066512487,0,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.30559649555362,0,0.284743361598206,0.372798891650601,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,1.29894624606728,0.760079596425296,0.505524445014783,0.91347103775248,2.33044095282455,1.7813056687779,0.693941307064543,1.21786191324856,0.691846491768175,0.753613202763113,0.940709657085638,1.13099932196708,0,0.578397427679647,3.5384422077995,0.485300549842228,1.32504911076236,0.969750506270444,7.45567044872489,0.585561594023094,0,6.89734049063197,0.359445373517761,0.599902730993408,0.127070227073065,0.449371918214468,0,0.628271760564322,0,1.02286182932132,0.41557608911912,0.162241263067758,0.203678727700633,0.622034853050465,0,4.20883711772948,0.260240885925407,0.229902104433473,0.360124259610698,0,0.136072998302656,0.12811372028485,0.0937017245597288,1.81092359517311,0.431135985865684,0.189106080167819,0.351902248327898,0.657587197282725,0.278047249225598,1.0447564995665,0.823128545631774,0.398068533636986,0,1.02939162845886,0.568326998791185,0,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,0,0.930135779001631,0,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0.146199987425332,0.439100230582101,0.402619256281115,0.210289948564127,0.102904612379284,4.95628174475697,1.05780226665418,0.426576501070468,1.16118335930219,2.96395161040815,4.63872106633688,8.45036566610507,7.60902504450237,6.16887780007865,6.91735609840846,9.0480675168097,8.55512829776949,9.94316844307513,8.98819408654222,10.3746263939853,8.36393347668342,0.189667900953082,0.913988100877831,2.25415471346161,1.22190796707189,1.35766741017338,0.561086559122548,0.948548056863859,0.295220295959204,0.784993639206874,0.370191491765402,0.296452627087149,0.333690211432188,0.393117990226406,0.449724224769707,0.608580364165509,0,0.25462585178142,0.575392274901621,0.486405680325106,0.549122826376163,0,0.744281895337007,0.312037673114561,0.505157755894224,0,0.482443521363367,0.739012760666419,0.947457058852424,0.325929952884052,0.339490171550376,1.40814148973101,0.502518772325447,0.476087281772027,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,0.327726629431476,1.03610989119537,0.433947175744535,3.01582567878545,2.17562273527484,0.491764273019036,2.20749397043786,0.321101179975584,0.35163505977661,0.163934945376675,0,0.315508219416257,0.780877488593277,0.215423397732799,0.238968797952552,0.222798674082394,0,1.21443210502468,0.292255857911312,0,0.642642632843614,1.13552068166615,0.534196811001766,0.488660878060728,1.64970122972535,15.9294166007955,0.728341908464944,1.51161778482376,8.48722858901541,10.6308681437078,8.30074899448604,3.87642439752332,6.5436071305951,9.26893183800275,12.6414703174326,27.4088382294997,12.3762651897824,0,0.36012218806262,0.258717367565509,0.214337035031592,0,0.178368817602071,0,0,0.704015124191131,0,0,0.32977250588296,0.968786560175433,0.784068024066026,0.358117032009409,0.984845398470368,9.03590593552537,0.927126510052548,0.341741761595705,1.03193433981611,0.740778109478847,0.941842285023455,0.956859594047176,1.14389086603261,0.509935289981566,0.279902904647316,0.138199973804424,5.72802370809068,0.632671987162271,1.42323626988794,6.04829908602087,4.59994251231831,8.29777742235475,4.31565908431426,6.03370226794952,11.2555055053133,8.03612834409116,6.21339313086926,0,0.598066184175915,0.165458490457098,0.777804753376191,0.387479470433193,1.520605129417,0.938857909166032,0.781226309063701,0.419437377702843,0,0.288030006257865,2.8441000856536,0.202725215290164,1.33524244314275,1.42912905275575,1.07416017400489,0.79472541912506,1.56254084375959,2.80610101631697,3.73575864808146,1.82896335972,2.41982844328417,1.94915761479505,3.65604998233252,3.27255326108393,0.680191150845634,0.221985953374065,0.358855426437903,0.335769232728157,4.82973985080476,1.87682475451182,3.6630324853453,3.21552568618599,0.501572104035363,0,0.920650473014354,0,0.171853182343688,0,0,0,0,0.453142408984205,1.03552062350364,0.103787347584177,0,0,1.9448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| |||
|short_description=p@chr8:60132427..60132474,- | |||
}} | |||
Revision as of 15:49, 14 September 2013
| Short description: | p@chr8:60132427..60132474, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr8:60132427..60132474, - |
| Coexpression cluster: | MCL_coexpression_mm9:2635 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| gastrointestinal system | 1.28e-22 | 47 |
| intestine | 3.82e-19 | 31 |
| digestive system | 1.23e-11 | 116 |
| digestive tract | 1.23e-11 | 116 |
| primitive gut | 1.23e-11 | 116 |
| endoderm-derived structure | 3.90e-11 | 118 |
| endoderm | 3.90e-11 | 118 |
| presumptive endoderm | 3.90e-11 | 118 |
| subdivision of digestive tract | 7.38e-11 | 114 |
| pancreas | 4.55e-10 | 12 |
| viscus | 9.87e-08 | 19 |
| mucosa | 1.34e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
