FFCP PHASE1:Mm9::chr8:62997035..62997039,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=338|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:62997035..62997039,+|id=chr8:62997035..62997039,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!1.94e-19!49;UBERON:0005173!1.94e-19!49;UBERON:0002417!1.94e-19!49;UBERON:0000916!1.94e-19!49;UBERON:0002113!3.09e-15!14;UBERON:0003918!3.09e-15!14;UBERON:0005095!3.09e-15!14;UBERON:0007687!3.09e-15!14;UBERON:0002107!5.99e-14!22;UBERON:0007499!5.99e-14!22;UBERON:0006925!5.99e-14!22;UBERON:0009497!5.99e-14!22;UBERON:0000015!5.99e-14!22;UBERON:0002423!5.99e-14!22;UBERON:0006235!5.99e-14!22;UBERON:0008835!5.99e-14!22;UBERON:0003894!5.99e-14!22;UBERON:0004161!5.99e-14!22;UBERON:0008836!5.99e-14!22;UBERON:0009569!2.88e-13!66;UBERON:0009854!3.04e-13!23;UBERON:0009856!3.04e-13!23;UBERON:0006554!4.01e-13!16;UBERON:0001008!2.97e-12!17;UBERON:0002365!5.31e-12!25;UBERON:0002330!5.31e-12!25;UBERON:0000489!1.32e-09!21;UBERON:0005177!2.65e-09!85;UBERON:0002100!1.74e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0002113,7.31e-15,14;UBERON:0003918,7.31e-15,14;UBERON:0011143,7.31e-15,14;UBERON:0005095,7.31e-15,14;UBERON:0007687,7.31e-15,14;UBERON:0005172,1.11e-12,49;UBERON:0005173,1.11e-12,49;UBERON:0002417,1.11e-12,49;UBERON:0000916,1.11e-12,49;UBERON:0006554,1.13e-11,18;UBERON:0001008,4.37e-11,19;UBERON:0003104,3.20e-10,61;UBERON:0009142,3.20e-10,61;UBERON:0000489,4.49e-10,21;UBERON:0009569,1.86e-09,66;UBERON:0005177,6.48e-08,79;UBERON:0002100,5.94e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.775809948670503,1.19230893813542,4.67950374719504,8.11855813887812,7.22194148070324,0.863780147452604,0,0,0,0,0,0.241177159752417,0,0.287696137450811,2.10775794807546,0,4.31304619582064,0.372140947668503,0.936113019343682,0.757736633841335,0.538192240565737,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr8:62997035..62997039,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=338 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:62997035..62997039,+ | |||
|id=chr8:62997035..62997039,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.94e-19!49;UBERON:0005173!1.94e-19!49;UBERON:0002417!1.94e-19!49;UBERON:0000916!1.94e-19!49;UBERON:0002113!3.09e-15!14;UBERON:0003918!3.09e-15!14;UBERON:0005095!3.09e-15!14;UBERON:0007687!3.09e-15!14;UBERON:0002107!5.99e-14!22;UBERON:0007499!5.99e-14!22;UBERON:0006925!5.99e-14!22;UBERON:0009497!5.99e-14!22;UBERON:0000015!5.99e-14!22;UBERON:0002423!5.99e-14!22;UBERON:0006235!5.99e-14!22;UBERON:0008835!5.99e-14!22;UBERON:0003894!5.99e-14!22;UBERON:0004161!5.99e-14!22;UBERON:0008836!5.99e-14!22;UBERON:0009569!2.88e-13!66;UBERON:0009854!3.04e-13!23;UBERON:0009856!3.04e-13!23;UBERON:0006554!4.01e-13!16;UBERON:0001008!2.97e-12!17;UBERON:0002365!5.31e-12!25;UBERON:0002330!5.31e-12!25;UBERON:0000489!1.32e-09!21;UBERON:0005177!2.65e-09!85;UBERON:0002100!1.74e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,7.31e-15,14;UBERON:0003918,7.31e-15,14;UBERON:0011143,7.31e-15,14;UBERON:0005095,7.31e-15,14;UBERON:0007687,7.31e-15,14;UBERON:0005172,1.11e-12,49;UBERON:0005173,1.11e-12,49;UBERON:0002417,1.11e-12,49;UBERON:0000916,1.11e-12,49;UBERON:0006554,1.13e-11,18;UBERON:0001008,4.37e-11,19;UBERON:0003104,3.20e-10,61;UBERON:0009142,3.20e-10,61;UBERON:0000489,4.49e-10,21;UBERON:0009569,1.86e-09,66;UBERON:0005177,6.48e-08,79;UBERON:0002100,5.94e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.775809948670503,1.19230893813542,4.67950374719504,8.11855813887812,7.22194148070324,0.863780147452604,0,0,0,0,0,0.241177159752417,0,0.287696137450811,2.10775794807546,0,4.31304619582064,0.372140947668503,0.936113019343682,0.757736633841335,0.538192240565737,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr8:62997035..62997039,+ | |||
}} |
Revision as of 15:50, 14 September 2013
Short description: | p@chr8:62997035..62997039, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:62997035..62997039, + |
Coexpression cluster: | MCL_coexpression_mm9:338 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 7.31e-15 | 14 |
kidney mesenchyme | 7.31e-15 | 14 |
upper urinary tract | 7.31e-15 | 14 |
kidney rudiment | 7.31e-15 | 14 |
kidney field | 7.31e-15 | 14 |
abdomen element | 1.11e-12 | 49 |
abdominal segment element | 1.11e-12 | 49 |
abdominal segment of trunk | 1.11e-12 | 49 |
abdomen | 1.11e-12 | 49 |
urinary system structure | 1.13e-11 | 18 |
renal system | 4.37e-11 | 19 |
mesenchyme | 3.20e-10 | 61 |
entire embryonic mesenchyme | 3.20e-10 | 61 |
cavitated compound organ | 4.49e-10 | 21 |
subdivision of trunk | 1.86e-09 | 66 |
trunk region element | 6.48e-08 | 79 |
trunk | 5.94e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.