FFCP PHASE1:Mm9::chr17:34764056..34764069,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54397|HGNC=|MCL_coexpression_id=11|UniProt=O35448|association_with_transcript=-14bp_to_NM_019441,uc008cdd.1_5end|description=CAGE_peak_9_at_Ppt2_5end|id=chr17:34764056..34764069,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!3.02e-15!14;UBERON:0003918!3.02e-15!14;UBERON:0005095!3.02e-15!14;UBERON:0007687!3.02e-15!14;UBERON:0006554!5.52e-13!16;UBERON:0000489!7.44e-13!21;UBERON:0001008!4.70e-12!17|ontology_enrichment_uberon_v019_2=UBERON:0002113,5.98e-50,14;UBERON:0003918,5.98e-50,14;UBERON:0011143,5.98e-50,14;UBERON:0005095,5.98e-50,14;UBERON:0007687,5.98e-50,14;UBERON:0006554,8.15e-39,18;UBERON:0001008,9.21e-37,19;UBERON:0000489,3.06e-33,21;UBERON:0003103,4.53e-16,43;UBERON:0005172,4.73e-14,49;UBERON:0005173,4.73e-14,49;UBERON:0002417,4.73e-14,49;UBERON:0000916,4.73e-14,49;UBERON:0003104,3.40e-11,61;UBERON:0009142,3.40e-11,61;UBERON:0006834,2.48e-10,1;UBERON:0009569,2.62e-10,66;UBERON:0005177,1.60e-08,79;UBERON:0002100,2.09e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0.443461021310609,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0,0,0.124406970610093,1.0108910337347,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,2.03651327845314,4.26695471768777,4.20814919341911,3.73095569033118,4.28069429140846,5.02395929092399,4.68909222902842,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,4.50437941082837,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.644613162144895,0,0,0|short_description=p9@Ppt2}} | ||
|EntrezGene=54397 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|UniProt=O35448 | |||
|association_with_transcript=-14bp_to_NM_019441,uc008cdd.1_5end | |||
|description=CAGE_peak_9_at_Ppt2_5end | |||
|id=chr17:34764056..34764069,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!3.02e-15!14;UBERON:0003918!3.02e-15!14;UBERON:0005095!3.02e-15!14;UBERON:0007687!3.02e-15!14;UBERON:0006554!5.52e-13!16;UBERON:0000489!7.44e-13!21;UBERON:0001008!4.70e-12!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,5.98e-50,14;UBERON:0003918,5.98e-50,14;UBERON:0011143,5.98e-50,14;UBERON:0005095,5.98e-50,14;UBERON:0007687,5.98e-50,14;UBERON:0006554,8.15e-39,18;UBERON:0001008,9.21e-37,19;UBERON:0000489,3.06e-33,21;UBERON:0003103,4.53e-16,43;UBERON:0005172,4.73e-14,49;UBERON:0005173,4.73e-14,49;UBERON:0002417,4.73e-14,49;UBERON:0000916,4.73e-14,49;UBERON:0003104,3.40e-11,61;UBERON:0009142,3.40e-11,61;UBERON:0006834,2.48e-10,1;UBERON:0009569,2.62e-10,66;UBERON:0005177,1.60e-08,79;UBERON:0002100,2.09e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0.443461021310609,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0,0,0.124406970610093,1.0108910337347,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,2.03651327845314,4.26695471768777,4.20814919341911,3.73095569033118,4.28069429140846,5.02395929092399,4.68909222902842,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,4.50437941082837,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.644613162144895,0,0,0 | |||
|short_description=p9@Ppt2 | |||
}} |
Revision as of 14:16, 13 September 2013
Short description: | p9@Ppt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Ppt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | -14bp_to_NM_019441, uc008cdd.1_5end |
EntrezGene: | Ppt2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 5.98e-50 | 14 |
kidney mesenchyme | 5.98e-50 | 14 |
upper urinary tract | 5.98e-50 | 14 |
kidney rudiment | 5.98e-50 | 14 |
kidney field | 5.98e-50 | 14 |
urinary system structure | 8.15e-39 | 18 |
renal system | 9.21e-37 | 19 |
cavitated compound organ | 3.06e-33 | 21 |
compound organ | 4.53e-16 | 43 |
abdomen element | 4.73e-14 | 49 |
abdominal segment element | 4.73e-14 | 49 |
abdominal segment of trunk | 4.73e-14 | 49 |
abdomen | 4.73e-14 | 49 |
mesenchyme | 3.40e-11 | 61 |
entire embryonic mesenchyme | 3.40e-11 | 61 |
uterus or analog | 2.48e-10 | 1 |
subdivision of trunk | 2.62e-10 | 66 |
trunk region element | 1.60e-08 | 79 |
trunk | 2.09e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.